; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017321 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017321
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A1
Genome locationscaffold33:1591337..1591462
RNA-Seq ExpressionMS017321
SyntenyMS017321
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0034357 - photosynthetic membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domainsIPR001280 - Photosystem I PsaA/PsaB
IPR036408 - Photosystem I PsaA/PsaB superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAC87904.1 photosystem1 subunit A, partial [Amborella trichopoda]1.3e-0771.43Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +SRTIA   PNTTTWIWNLH DAH F SHTS+LEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

CAC87912.1 photosystem1 subunit A, partial [Cleomella arborea]4.9e-0769.05Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +SRTIA   P+TTTWIWNLH DAH F SHTS+LEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

CAC87920.2 photosystem1 subunit A, partial [Persea americana]4.9e-0769.05Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +SRTIA   P+TTTWIWNLH DAH F SHTS+LEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

CAC87924.2 photosystem1 subunit A, partial [Spathiphyllum sp. SM328]4.9e-0769.05Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +SRTIA   P+TTTWIWNLH DAH F SHTS+LEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

CAC87927.1 photosystem1 subunit A, partial [Cryptomeria japonica]2.8e-0766.67Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +S+T+A   PNTTTWIWNLH DAH F SHT+NLEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

TrEMBL top hitse value%identityAlignment
Q8M900 Photosystem I P700 chlorophyll a apoprotein A1 (Fragment)2.4e-0769.05Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +SRTIA   P+TTTWIWNLH DAH F SHTS+LEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

Q8M9Q6 Photosystem I P700 chlorophyll a apoprotein A1 (Fragment)2.4e-0769.05Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +SRTIA   P+TTTWIWNLH DAH F SHTS+LEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

Q8M9R8 Photosystem I P700 chlorophyll a apoprotein A1 (Fragment)2.4e-0769.05Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +SRTIA   P+TTTWIWNLH DAH F SHTS+LEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

Q8MA52 Photosystem I P700 chlorophyll a apoprotein A1 (Fragment)1.4e-0766.67Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +S+T+A   PNTTTWIWNLH DAH F SHT+NLEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

Q8MF88 Photosystem I P700 chlorophyll a apoprotein A1 (Fragment)2.4e-0769.05Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +SRTIA   P+TTTWIWNLH DAH F SHTS+LEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

SwissProt top hitse value%identityAlignment
A4QJB5 Photosystem I P700 chlorophyll a apoprotein A13.2e-0971.43Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +SRTI AK P+TTTWIWNLH DAH F SHTS+LEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

A4QJJ9 Photosystem I P700 chlorophyll a apoprotein A13.2e-0971.43Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +SRTI AK P+TTTWIWNLH DAH F SHTS+LEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

A4QK18 Photosystem I P700 chlorophyll a apoprotein A13.2e-0971.43Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +SRTI AK P+TTTWIWNLH DAH F SHTS+LEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

Q3V534 Photosystem I P700 chlorophyll a apoprotein A13.2e-0971.43Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +SRTI AK P+TTTWIWNLH DAH F SHTS+LEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

Q70Y03 Photosystem I P700 chlorophyll a apoprotein A18.3e-1073.81Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +SRTI AK PNTTTWIWNLH DAH F SHTS+LEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK

Arabidopsis top hitse value%identityAlignment
ATCG00350.1 Photosystem I, PsaA/PsaB protein2.2e-1071.43Show/hide
Query:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK
        P  +SRTI AK P+TTTWIWNLH DAH F SHTS+LEE S K
Subjt:  PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCACTTTTTTGGTCGAGAACAATAGCAGCTAAATGTCCTAATACTACTACTTGGATCTGGAATCTTCATGTTGATGCTCATGGTTTTCATAGCCATACTAGTAATTTGGA
GGAGTACTCGGCTAAG
mRNA sequenceShow/hide mRNA sequence
CCACTTTTTTGGTCGAGAACAATAGCAGCTAAATGTCCTAATACTACTACTTGGATCTGGAATCTTCATGTTGATGCTCATGGTTTTCATAGCCATACTAGTAATTTGGA
GGAGTACTCGGCTAAG
Protein sequenceShow/hide protein sequence
PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK