CuGenDBv2

Gene ID	MS017326
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	60S ribosomal protein L35
Genome location	scaffold33:1616370..1617717
RNA-Seq Expression	MS017326
Synteny	MS017326
Gene Ontology terms	GO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001854 - Ribosomal protein L29/L35 IPR036049 - Ribosomal protein L29/L35 superfamily IPR045059 - 60S ribosomal protein L35

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7031634.1 60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.2e-51

97.54

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Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELRQKSKADLL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTER+KKKEMYYPLRKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

XP_004150961.1 60S ribosomal protein L35 [Cucumis sativus]

1.5e-51

98.36

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Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELRQKSK DLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTERQKKKEMYYPLRKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

XP_022134532.1 60S ribosomal protein L35 [Momordica charantia]

2.5e-51

98.36

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Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELRQKSKADLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTERQKKKEMY+PLRKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

XP_022139337.1 60S ribosomal protein L35-2 [Momordica charantia]

1.0e-52

100

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Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTERQKKKEMYYPLRKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

XP_022939961.1 60S ribosomal protein L35 [Cucurbita moschata]

4.2e-51

97.54

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Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELRQKSKADLL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTER+KKKEMYYPLRKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLK6 Uncharacterized protein

7.0e-52

98.36

Show/hide

Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELRQKSK DLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTERQKKKEMYYPLRKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

A0A6J1BZV3 60S ribosomal protein L35

1.2e-51

98.36

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Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELRQKSKADLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTERQKKKEMY+PLRKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

A0A6J1CDN9 60S ribosomal protein L35-2

4.9e-53

100

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Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTERQKKKEMYYPLRKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

A0A6J1FH81 60S ribosomal protein L35

2.0e-51

97.54

Show/hide

Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELRQKSKADLL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTER+KKKEMYYPLRKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

A0A6J1JVN4 60S ribosomal protein L35

2.0e-51

97.54

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Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELRQKSKADLL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTER+KKKEMYYPLRKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

SwissProt top hits

e value

%identity

Alignment

O80626 60S ribosomal protein L35-2

5.7e-51

91.8

Show/hide

Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELR+KSKADL GQLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTER+KKKEMY+P+RKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

Q9LZ41 60S ribosomal protein L35-4

1.8e-49

90.16

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Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELR KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTER+KKKEMY+P+RKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

Q9M3D2 60S ribosomal protein L35-3

3.5e-48

88.52

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Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELR KSK+DL  QLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTER+KKK+MY+P+RKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

Q9M5L0 60S ribosomal protein L35

7.5e-51

91.8

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Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELRQK+KA+LL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ S
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTER+KKKEMY+P+RKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

Q9SF53 60S ribosomal protein L35-1

1.1e-49

90.16

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Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELR+KSK+DL  QLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTER+KKKEMY+P+RKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

Arabidopsis top hits

e value

%identity

Alignment

AT2G39390.1 Ribosomal L29 family protein

4.1e-52

91.8

Show/hide

Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELR+KSKADL GQLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTER+KKKEMY+P+RKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

AT3G09500.1 Ribosomal L29 family protein

7.7e-51

90.16

Show/hide

Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELR+KSK+DL  QLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTER+KKKEMY+P+RKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

AT3G55170.1 Ribosomal L29 family protein

2.5e-49

88.52

Show/hide

Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELR KSK+DL  QLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTER+KKK+MY+P+RKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

AT3G55170.2 Ribosomal L29 family protein

2.5e-49

88.52

Show/hide

Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELR KSK+DL  QLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTER+KKK+MY+P+RKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

AT5G02610.1 Ribosomal L29 family protein

1.3e-50

90.16

Show/hide

Query:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        ARIKVHELR KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKEMYYPLRKYAIKV
        LKTER+KKKEMY+P+RKYAIKV
Subjt:  LKTERQKKKEMYYPLRKYAIKV

Sequences

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CDS sequence

Show/hide CDS sequence

GCAGCGAGAATTAAGGTTCACGAGCTTAGACAGAAGTCGAAGGCAGATCTTTTGGGCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTTCTACGTGTTGCTAAGGTCAC
CGGTGGTGCTCCCAACAAGCTCTCCAAAATTAAGGTGGTGAGGTTGTCAATCGCTCAGGTGTTGACAGTGATTTCTCAGAAACAGAAGGCCGCGCTTAGGGAAGCTTACA
AGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCCAAGAAGACCAGGGCCATTCGTAGAAGACTCACCAAGCACCAAGCATCTCTAAAGACCGAGCGACAGAAGAAGAAA
GAGATGTACTACCCATTGAGGAAGTATGCCATTAAGGTG

mRNA sequence

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Protein sequence

Show/hide protein sequence

AARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKK
EMYYPLRKYAIKV

MS017326 (gene) of Bitter gourd (TR) v1 genome