CuGenDBv2

Gene ID	MS017352
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	scaffold322:50767..50871
RNA-Seq Expression	MS017352
Synteny	MS017352
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

CAF1735984.1 unnamed protein product [Brassica napus]

8.2e-08

88.24

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Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        T GNFAQSSITINGWLRDFLW QASQVIQF G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

QJS34852.1 photosystem I P700 chlorophyll A apoprotein A1 [Erythronium japonicum]

1.8e-07

88.24

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Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        T GNFAQSSITINGWLRDFLWTQASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

RZC64926.1 hypothetical protein C5167_008616 [Papaver somniferum]

1.8e-07

88.24

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Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        T GNFAQSSITINGWLRDFLWTQASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

YP_009731413.1 photosystem I P700 apoprotein A1 [Corybas taliensis]

1.1e-07

88.24

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Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        TVGNFAQSSITINGWLRDFLW QASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

YP_009768336.1 photosystem I P700 chlorophyll a apoprotein A1 [Micklethwaitia carvalhoi]

1.8e-07

88.24

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Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        T GNFAQSSITINGWLRDFLWTQASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

TrEMBL top hits

e value

%identity

Alignment

A0A4Y7JWI2 Photosystem I P700 chlorophyll a apoprotein A1

8.8e-08

88.24

Show/hide

Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        T GNFAQSSITINGWLRDFLWTQASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

A0A6B9UP86 Photosystem I P700 chlorophyll a apoprotein A1

5.2e-08

88.24

Show/hide

Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        TVGNFAQSSITINGWLRDFLW QASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

A0A6H0EAF9 Photosystem I P700 chlorophyll a apoprotein A1

8.8e-08

88.24

Show/hide

Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        T GNFAQSSITINGWLRDFLWTQASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

A0A6M4RGZ8 Photosystem I P700 chlorophyll a apoprotein A1

8.8e-08

88.24

Show/hide

Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        T GNFAQSSITINGWLRDFLWTQASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

A0A7T3U4I3 Photosystem I P700 apoprotein A1

8.8e-08

88.24

Show/hide

Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        T GNFAQSSITINGWLRDFLWTQASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

SwissProt top hits

e value

%identity

Alignment

A4QJB5 Photosystem I P700 chlorophyll a apoprotein A1

9.1e-10

85.29

Show/hide

Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        T GNFAQSSITINGWLRDFLW QASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

A4QJJ9 Photosystem I P700 chlorophyll a apoprotein A1

9.1e-10

85.29

Show/hide

Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        T GNFAQSSITINGWLRDFLW QASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

P05310 Photosystem I P700 chlorophyll a apoprotein A1

4.1e-10

85.29

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Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        T GNFAQSSITINGWLRDFLW QASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

Q3V534 Photosystem I P700 chlorophyll a apoprotein A1

9.1e-10

85.29

Show/hide

Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        T GNFAQSSITINGWLRDFLW QASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

Q5SD06 Photosystem I P700 chlorophyll a apoprotein A1

6.9e-10

85.29

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Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        T GNFAQSSITINGWLRDFLW QASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

Arabidopsis top hits

e value

%identity

Alignment

ATCG00350.1 Photosystem I, PsaA/PsaB protein

6.4e-11

85.29

Show/hide

Query:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS
        T GNFAQSSITINGWLRDFLW QASQVIQ  G S
Subjt:  TVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

Sequences

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CDS sequence

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TTTACCGTAGGAAACTTTGCGCAAAGTTCCATTACTATTAATGGGTGGCTTCGCGATTTCTTATGGACACAGGCATCCCAGGTAATTCAGTTCAAGGGGCCTTCA

mRNA sequence

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TTTACCGTAGGAAACTTTGCGCAAAGTTCCATTACTATTAATGGGTGGCTTCGCGATTTCTTATGGACACAGGCATCCCAGGTAATTCAGTTCAAGGGGCCTTCA

Protein sequence

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FTVGNFAQSSITINGWLRDFLWTQASQVIQFKGPS

MS017352 (gene) of Bitter gourd (TR) v1 genome