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MS017353 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017353
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionORF43m
Genome locationscaffold322:52310..52498
RNA-Seq ExpressionMS017353
SyntenyMS017353
Gene Ontology termsGO:0018298 - protein-chromophore linkage (biological process)
GO:0006101 - citrate metabolic process (biological process)
GO:0006351 - transcription, DNA-templated (biological process)
GO:0006412 - translation (biological process)
GO:0009767 - photosynthetic electron transport chain (biological process)
GO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0009521 - photosystem (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0015078 - proton transmembrane transporter activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0004108 - citrate (Si)-synthase activity (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM97427.1 hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda]4.7e-1488.89Show/hide
Query:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
        VGGSLRVP SGIP EEDQVGPCEQ+DALSPFNPLS+MRQKEGKS+
Subjt:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
KAF4348549.1 hypothetical protein F8388_000228 [Cannabis sativa]4.7e-1488.89Show/hide
Query:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
        VGGSLRVP SGIP EEDQVGPCEQ+DALSPFNPLS+MRQKEGKS+
Subjt:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
KAF4360944.1 hypothetical protein G4B88_015419 [Cannabis sativa]4.7e-1488.89Show/hide
Query:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
        VGGSLRVP SGIP EEDQVGPCEQ+DALSPFNPLS+MRQKEGKS+
Subjt:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
KAF4361765.1 hypothetical protein G4B88_012073 [Cannabis sativa]4.7e-1488.89Show/hide
Query:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
        VGGSLRVP SGIP EEDQVGPCEQ+DALSPFNPLS+MRQKEGKS+
Subjt:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
TYK06708.1 hypothetical protein E5676_scaffold13G00090 [Cucumis melo var. makuwa]4.7e-1488.89Show/hide
Query:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
        VGGSLRVP SGIP EEDQVGPCEQ+DALSPFNPLS+MRQKEGKS+
Subjt:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
TrEMBL top hitse value%identityAlignment
A0A5D3C6C5 Uncharacterized protein2.3e-1488.89Show/hide
Query:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
        VGGSLRVP SGIP EEDQVGPCEQ+DALSPFNPLS+MRQKEGKS+
Subjt:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
A0A6B9QF48 ORF43m2.3e-1488.89Show/hide
Query:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
        VGGSLRVP SGIP EEDQVGPCEQ+DALSPFNPLS+MRQKEGKS+
Subjt:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
A0A6B9QFK3 ORF43m2.3e-1488.89Show/hide
Query:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
        VGGSLRVP SGIP EEDQVGPCEQ+DALSPFNPLS+MRQKEGKS+
Subjt:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
A0A6B9QGL2 ORF43m2.3e-1488.89Show/hide
Query:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
        VGGSLRVP SGIP EEDQVGPCEQ+DALSPFNPLS+MRQKEGKS+
Subjt:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
A0A7J6ETR9 Citrate synthase2.3e-1488.89Show/hide
Query:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
        VGGSLRVP SGIP EEDQVGPCEQ+DALSPFNPLS+MRQKEGKS+
Subjt:  VGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGCCCAGAAAAATTTGTCATGGCTGGGTAGGTGGCTCTCTTAGGGTTCCCCCATCTGGGATCCCTACGGAAGAGGATCAAGTTGGCCCTTGCGAACAGATTGATGCACT
ATCTCCCTTCAACCCTTTGAGCAAAATGCGGCAAAAGGAAGGAAAATCCATAGGGTGGATTTTGGTTGAAAGATTTTTA
mRNA sequenceShow/hide mRNA sequence
TCGCCCAGAAAAATTTGTCATGGCTGGGTAGGTGGCTCTCTTAGGGTTCCCCCATCTGGGATCCCTACGGAAGAGGATCAAGTTGGCCCTTGCGAACAGATTGATGCACT
ATCTCCCTTCAACCCTTTGAGCAAAATGCGGCAAAAGGAAGGAAAATCCATAGGGTGGATTTTGGTTGAAAGATTTTTA
Protein sequenceShow/hide protein sequence
SPRKICHGWVGGSLRVPPSGIPTEEDQVGPCEQIDALSPFNPLSKMRQKEGKSIGWILVERFL