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MS017361 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017361
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMembrane lipoprotein, putative
Genome locationscaffold322:172013..172447
RNA-Seq ExpressionMS017361
SyntenyMS017361
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040748.1 hypothetical protein E6C27_scaffold703G00110 [Cucumis melo var. makuwa]5.7e-3963.64Show/hide
Query:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVAN-------
        MSLV+PS GRAFIWI+T FLFF I+SGGGCL+MYMILPE+E+T WLP+ GL LVCLPWFFW+LTFFYRVISRACG+RVSLG G   G   V +       
Subjt:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVAN-------

Query:  --ASSESPRGPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS
          +S+ESPR    +  +ED +      +R S SSS NS VSRESEMPLAITMAS
Subjt:  --ASSESPRGPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS

KAE8651991.1 hypothetical protein Csa_016945 [Cucumis sativus]6.1e-4167.59Show/hide
Query:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVANASSESPR
        MSLV+PS GRAFIWI+T FLFF ILSGGGCL+MYMILPETETTAWLP+ GL LVCLPWFFW+LTFFYRV+SRACGFRVSLG+G  D G            
Subjt:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVANASSESPR

Query:  GPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS
            + D+ED +      +R+S SSS NS VSRESEMPLAITMAS
Subjt:  GPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS

XP_011649431.1 putative uncharacterized protein DDB_G0284715 [Cucumis sativus]2.1e-4166.88Show/hide
Query:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVANA------
        MSLV+PS GRAFIWI+T FLFF ILSGGGCL+MYMILPETETTAWLP+ GL LVCLPWFFW+LTFFYRV+SRACGFRVSLG+G  D  +  ANA      
Subjt:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVANA------

Query:  ---SSESPRGPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS
           S+ES +    + D+ED +      +R+S SSS NS VSRESEMPLAITMAS
Subjt:  ---SSESPRGPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS

XP_022148967.1 uncharacterized protein LOC111017503 [Momordica charantia]9.6e-7198.62Show/hide
Query:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVANASSESPR
        MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGL LVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVANASSESP 
Subjt:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVANASSESPR

Query:  GPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS
        GPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS
Subjt:  GPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS

XP_038900833.1 uncharacterized protein LOC120087896 [Benincasa hispida]1.0e-4370.78Show/hide
Query:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVA--------
        MSLV+PS GRAFIWI+T FLFF I+SGGGCL+MYMILPETETTAWLP+ GL LVCLPWFFW+LTFFYRVISRACGFRVS+G+G VD GA  A        
Subjt:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVA--------

Query:  -NASSESPRGPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS
         NAS+ESPR  G D  DE+     GDQ+R S SSS NS  SRESEMPLAITM S
Subjt:  -NASSESPRGPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS

TrEMBL top hitse value%identityAlignment
A0A0A0LJX6 Uncharacterized protein1.0e-4166.88Show/hide
Query:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVANA------
        MSLV+PS GRAFIWI+T FLFF ILSGGGCL+MYMILPETETTAWLP+ GL LVCLPWFFW+LTFFYRV+SRACGFRVSLG+G  D  +  ANA      
Subjt:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVANA------

Query:  ---SSESPRGPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS
           S+ES +    + D+ED +      +R+S SSS NS VSRESEMPLAITMAS
Subjt:  ---SSESPRGPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS

A0A1S3CDW9 Uncharacterized protein4.7e-3963.64Show/hide
Query:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVAN-------
        MSLV+PS GRAFIWI+T FLFF I+SGGGCL+MYMILPE+E+T WLP+ GL LVCLPWFFW+LTFFYRVISRACG+RVSLG G   G   V +       
Subjt:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVAN-------

Query:  --ASSESPRGPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS
          +S+ESPR    +  +ED +      +R S SSS NS VSRESEMPLAITMAS
Subjt:  --ASSESPRGPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS

A0A5A7TCV0 Uncharacterized protein2.8e-3963.64Show/hide
Query:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVAN-------
        MSLV+PS GRAFIWI+T FLFF I+SGGGCL+MYMILPE+E+T WLP+ GL LVCLPWFFW+LTFFYRVISRACG+RVSLG G   G   V +       
Subjt:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVAN-------

Query:  --ASSESPRGPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS
          +S+ESPR    +  +ED +      +R S SSS NS VSRESEMPLAITMAS
Subjt:  --ASSESPRGPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS

A0A6J1D6I2 uncharacterized protein LOC1110175034.7e-7198.62Show/hide
Query:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVANASSESPR
        MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGL LVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVANASSESP 
Subjt:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVANASSESPR

Query:  GPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS
        GPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS
Subjt:  GPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS

A0A6J1EV39 uncharacterized protein LOC1114383192.9e-3660.26Show/hide
Query:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVV------DGGAGVANA
        MSLVDPS GRAF+W +   LF CILSGG CL++Y+ILPETE+TAWLP+ GL LVCLPWFFWILTFFYRVISRACGFRVSL +         D      N+
Subjt:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVV------DGGAGVANA

Query:  SSESPRGPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS
        S ESPR       +EDG+    D +R S  SS NS +SRESE+P AI+M S
Subjt:  SSESPRGPGIDNDDEDGHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30770.1 Putative membrane lipoprotein2.3e-2243.4Show/hide
Query:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGA-GVANASSESP
        M + DP  G+AFI +IT+FLF  I  GGGCL+ Y ILP      WL  +G+  VCLPWFFWILTF YR++SR  GFR+ +G G  +  A G        P
Subjt:  MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGA-GVANASSESP

Query:  RGPGIDNDDEDGHGGL------------GDQKRNSTSSSRNSAV-SRESEMPLAITMAS
            +++ D+D    +            G+Q +   S+S NS + S ESEMPLAI+MAS
Subjt:  RGPGIDNDDEDGHGGL------------GDQKRNSTSSSRNSAV-SRESEMPLAITMAS

AT5G17590.1 Putative membrane lipoprotein2.9e-0432.89Show/hide
Query:  VDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVS
        +D   G   I+IITV    CIL GG  L +Y++   ++        G+  V +PW FW L + Y  + + C   VS
Subjt:  VDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTGGTGGATCCATCGACTGGACGTGCATTCATATGGATCATCACCGTGTTTCTCTTTTTCTGCATTCTCTCCGGTGGTGGTTGCCTTGTGATGTACATGATCCT
ACCTGAGACTGAAACCACCGCGTGGTTGCCGATGGTCGGCCTCTTCTTAGTCTGCCTTCCTTGGTTTTTCTGGATCTTAACTTTCTTCTACAGAGTCATATCGCGTGCTT
GCGGTTTTAGGGTCTCCCTCGGCGTTGGGGTGGTCGACGGAGGCGCAGGGGTTGCCAATGCATCATCGGAATCCCCTCGAGGACCGGGTATCGATAATGATGATGAGGAT
GGCCATGGTGGTCTTGGTGATCAAAAGCGAAACAGTACTTCATCCTCCCGCAACTCAGCAGTATCTCGTGAAAGCGAAATGCCATTGGCCATAACAATGGCATCT
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTGGTGGATCCATCGACTGGACGTGCATTCATATGGATCATCACCGTGTTTCTCTTTTTCTGCATTCTCTCCGGTGGTGGTTGCCTTGTGATGTACATGATCCT
ACCTGAGACTGAAACCACCGCGTGGTTGCCGATGGTCGGCCTCTTCTTAGTCTGCCTTCCTTGGTTTTTCTGGATCTTAACTTTCTTCTACAGAGTCATATCGCGTGCTT
GCGGTTTTAGGGTCTCCCTCGGCGTTGGGGTGGTCGACGGAGGCGCAGGGGTTGCCAATGCATCATCGGAATCCCCTCGAGGACCGGGTATCGATAATGATGATGAGGAT
GGCCATGGTGGTCTTGGTGATCAAAAGCGAAACAGTACTTCATCCTCCCGCAACTCAGCAGTATCTCGTGAAAGCGAAATGCCATTGGCCATAACAATGGCATCT
Protein sequenceShow/hide protein sequence
MSLVDPSTGRAFIWIITVFLFFCILSGGGCLVMYMILPETETTAWLPMVGLFLVCLPWFFWILTFFYRVISRACGFRVSLGVGVVDGGAGVANASSESPRGPGIDNDDED
GHGGLGDQKRNSTSSSRNSAVSRESEMPLAITMAS