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MS017367 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017367
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold322:242988..243425
RNA-Seq ExpressionMS017367
SyntenyMS017367
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143645.1 S-protein homolog 1-like [Momordica charantia]8.0e-4157.25Show/hide
Query:  LLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNL-ARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESR
        + +V++   + Q+G A        P   WHIHVVNGLSK +LFVHCKSKD+D+G+HNL  RG E QW+F  N W TTL+WC+L+KP A  SF+ FWVE  
Subjt:  LLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNL-ARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESR

Query:  HNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW
        H WL +RC    CIW AKDDGIYLRNN D VDE IH+W
Subjt:  HNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW

XP_022143724.1 S-protein homolog 1-like [Momordica charantia]3.8e-4361.9Show/hide
Query:  MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASF
        +VLL VLA L V   Q  +    +AL   P  +    WH+HVVNGLS  +LF HCKS+D D+G HNL RG EIQWSF ENVWGTTLFWCFL+KPG +ASF
Subjt:  MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASF

Query:  DVFWVESRHNWLHHRCA-VLTCIWIAKDDGIYLRNNSDRVDELIHKW
        DVFW E  H WLH+RC    TCIW AKDDGIY+RN  D +DEL+HKW
Subjt:  DVFWVESRHNWLHHRCA-VLTCIWIAKDDGIYLRNNSDRVDELIHKW

XP_022148919.1 S-protein homolog 1-like [Momordica charantia]7.9e-8197.26Show/hide
Query:  MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASF
        MVLLLVLA LLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASF
Subjt:  MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASF

Query:  DVFWVESRHNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW
        DVFWVESRHNWLHHRCA+LTCIWIAKDDGIYLRNNSD +DELIHKW
Subjt:  DVFWVESRHNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW

XP_022155209.1 S-protein homolog 1-like [Momordica charantia]3.4e-3952.7Show/hide
Query:  MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASF
        MV+LLV + L+VV  QQ++  +    K+   ++    W ++V NGLS + LF+HCKSKD D+G  NL  G +IQW F  N WGTTL+WCF+RK   + S 
Subjt:  MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASF

Query:  DVFWVESRHNWLHHRCA--VLTCIWIAKDDGIYLRNNSDRVDELIHKW
        DVFWVE + +WL  RCA   ++CIWIAKDDGIY+RN S+ VDE+IHKW
Subjt:  DVFWVESRHNWLHHRCA--VLTCIWIAKDDGIYLRNNSDRVDELIHKW

XP_038896407.1 S-protein homolog 1-like [Benincasa hispida]8.0e-4155.78Show/hide
Query:  MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVG-LHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATAS
        MV  LVL GL+++    +        K  PV  P   WH+HVVNGL   +LFVHCKSKD+D+G  H ++ G E QWSF  N+W TTL+WC L KP A  S
Subjt:  MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVG-LHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATAS

Query:  FDVFWVESRHNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW
        FD FWVE RH WLH+RC    C W+AKDDGIYLRNN D VDE +HKW
Subjt:  FDVFWVESRHNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW

TrEMBL top hitse value%identityAlignment
A0A6J1CPC6 S-protein homolog3.9e-4157.25Show/hide
Query:  LLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNL-ARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESR
        + +V++   + Q+G A        P   WHIHVVNGLSK +LFVHCKSKD+D+G+HNL  RG E QW+F  N W TTL+WC+L+KP A  SF+ FWVE  
Subjt:  LLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNL-ARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESR

Query:  HNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW
        H WL +RC    CIW AKDDGIYLRNN D VDE IH+W
Subjt:  HNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW

A0A6J1CQ65 S-protein homolog1.9e-4361.9Show/hide
Query:  MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASF
        +VLL VLA L V   Q  +    +AL   P  +    WH+HVVNGLS  +LF HCKS+D D+G HNL RG EIQWSF ENVWGTTLFWCFL+KPG +ASF
Subjt:  MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASF

Query:  DVFWVESRHNWLHHRCA-VLTCIWIAKDDGIYLRNNSDRVDELIHKW
        DVFW E  H WLH+RC    TCIW AKDDGIY+RN  D +DEL+HKW
Subjt:  DVFWVESRHNWLHHRCA-VLTCIWIAKDDGIYLRNNSDRVDELIHKW

A0A6J1D5G6 S-protein homolog3.8e-8197.26Show/hide
Query:  MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASF
        MVLLLVLA LLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASF
Subjt:  MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASF

Query:  DVFWVESRHNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW
        DVFWVESRHNWLHHRCA+LTCIWIAKDDGIYLRNNSD +DELIHKW
Subjt:  DVFWVESRHNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW

A0A6J1DPK8 S-protein homolog1.6e-3952.7Show/hide
Query:  MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASF
        MV+LLV + L+VV  QQ++  +    K+   ++    W ++V NGLS + LF+HCKSKD D+G  NL  G +IQW F  N WGTTL+WCF+RK   + S 
Subjt:  MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASF

Query:  DVFWVESRHNWLHHRCA--VLTCIWIAKDDGIYLRNNSDRVDELIHKW
        DVFWVE + +WL  RCA   ++CIWIAKDDGIY+RN S+ VDE+IHKW
Subjt:  DVFWVESRHNWLHHRCA--VLTCIWIAKDDGIYLRNNSDRVDELIHKW

A0A6J1L0E8 S-protein homolog6.2e-3954.61Show/hide
Query:  LAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLAR-GFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWV
        L GLL  A   +   +  AL  +P++     W +HVVN L+  +LFVHCKSKD+D+G HNL   G E QWSF  N+W TTLFWC LRKP A  SF+ FW+
Subjt:  LAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLAR-GFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWV

Query:  ESRHNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW
        E  H WL++RC    CIW AKDDG+YLRNN D VDE +HKW
Subjt:  ESRHNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 64.5e-1033.88Show/hide
Query:  KNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWC-FLRKPGATASFDVFWVESRHNWLHHRCAVLTCIWIA
        K  P+K P T   I+  N      L VHCKS+D+D G H L +G    W F  N   +TL++C F ++      FD++      +    RC    C W A
Subjt:  KNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWC-FLRKPGATASFDVFWVESRHNWLHHRCAVLTCIWIA

Query:  KDDGIYLRNNSDRVDELIHKW
        K+DGIY      + + L +KW
Subjt:  KDDGIYLRNNSDRVDELIHKW

F4JLQ5 S-protein homolog 23.4e-1028.37Show/hide
Query:  IITQIGQA--LKNIPVKN---------PDTAWHIHVVNGLSKD-SLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWV
        I T++ QA    +IPV N         P +   + + N L    +L  HCKSKD+D+G   L  G    +SF    +G TL++C    P  + SFD++  
Subjt:  IITQIGQA--LKNIPVKN---------PDTAWHIHVVNGLSKD-SLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWV

Query:  ESRHNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW
        + R +   ++C    C+W  + +G    N+  +  +L + W
Subjt:  ESRHNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW

F4JLS0 S-protein homolog 15.6e-2137.5Show/hide
Query:  LLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSK-DSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDV
        LL +   L +  Q  +   G   ++I V    + W + VVNGL+  ++LF+HCKSK++D+G  NL       W+F EN+  +T FWC++ K     + +V
Subjt:  LLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSK-DSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDV

Query:  FWVESRHNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW
        FW +     L HRC    CIW AK DG+YL N++   D L  KW
Subjt:  FWVESRHNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW

Q2HQ46 S-protein homolog 743.3e-2142.73Show/hide
Query:  WHIHVVNGLSK-DSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHNWLHHRCAVLTCIWIAKDDGIYLRNNS
        W + V NGL+  ++LF+HCKSK+ND+G  NL       W+F EN+  +TLFWC++ K     +  VFW +     L HRC    C+W AK+DG+YL N++
Subjt:  WHIHVVNGLSK-DSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHNWLHHRCAVLTCIWIAKDDGIYLRNNS

Query:  DRVDELIHKW
           D L  KW
Subjt:  DRVDELIHKW

Q9FMQ4 S-protein homolog 33.4e-1028.7Show/hide
Query:  NPDTAWHIHVVNGLSKD-SLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHNWLHHRCAVLTCIWIAKDDGIY
        N  T+  + + N L    +L +HCKS D+D+GL  LA      + F  ++ GTTLF+C    PG +  FD++  +   + +    + + CIW     G  
Subjt:  NPDTAWHIHVVNGLSKD-SLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHNWLHHRCAVLTCIWIAKDDGIY

Query:  LRNNSDRVDELIHKW
        + + SD    + + W
Subjt:  LRNNSDRVDELIHKW

Arabidopsis top hitse value%identityAlignment
AT2G06090.1 Plant self-incompatibility protein S1 family1.7e-1237.89Show/hide
Query:  IHVVNGLSK--DSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHNWLHHRCAVLTCIWIAKDDGIYL
        +H  N  S+  D L VHCKSKD+D+G+H +AR +E  + F+++V+G T F+C L   G  + + V +   +          +  IW A DDGIYL
Subjt:  IHVVNGLSK--DSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHNWLHHRCAVLTCIWIAKDDGIYL

AT3G26880.1 Plant self-incompatibility protein S1 family1.2e-1033.33Show/hide
Query:  LLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWC-------FLRKPG
        + L + GL +++D      +      I VKN         +N  +K+ L VHCKSK+ND+G+  L  G  + +SF  N WGTT FWC       + R  G
Subjt:  LLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWC-------FLRKPG

Query:  ATA--SFDVFWVE-SRHNWLHHRCAVLTCIWIAKDDGIYLRNNS
         TA  +  +F  + S +NWL            A+DDGIY   +S
Subjt:  ATA--SFDVFWVE-SRHNWLHHRCAVLTCIWIAKDDGIYLRNNS

AT4G16295.1 S-protein homologue 14.0e-2237.5Show/hide
Query:  LLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSK-DSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDV
        LL +   L +  Q  +   G   ++I V    + W + VVNGL+  ++LF+HCKSK++D+G  NL       W+F EN+  +T FWC++ K     + +V
Subjt:  LLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSK-DSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDV

Query:  FWVESRHNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW
        FW +     L HRC    CIW AK DG+YL N++   D L  KW
Subjt:  FWVESRHNWLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW

AT4G29035.1 Plant self-incompatibility protein S1 family2.3e-2242.73Show/hide
Query:  WHIHVVNGLSK-DSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHNWLHHRCAVLTCIWIAKDDGIYLRNNS
        W + V NGL+  ++LF+HCKSK+ND+G  NL       W+F EN+  +TLFWC++ K     +  VFW +     L HRC    C+W AK+DG+YL N++
Subjt:  WHIHVVNGLSK-DSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHNWLHHRCAVLTCIWIAKDDGIYLRNNS

Query:  DRVDELIHKW
           D L  KW
Subjt:  DRVDELIHKW

AT5G04347.1 Plant self-incompatibility protein S1 family3.2e-1132.23Show/hide
Query:  LKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHNWLHHRCAVLTCIWIA
        L ++ ++N      + V N L+   L V C+SKD+++G H L  G   + +FD+NVW  TLFWC L K G      V +   R  W          +WIA
Subjt:  LKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHNWLHHRCAVLTCIWIA

Query:  KDDGIYLRNNSDRVDELIHKW
        ++DGIY   + +   +  + W
Subjt:  KDDGIYLRNNSDRVDELIHKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTGTTGCTTGTGTTGGCAGGTCTGTTGGTGGTGGCTGATCAACAAATAATAACCCAAATAGGGCAGGCACTGAAAAACATACCTGTAAAGAATCCTGATACAGC
TTGGCACATTCATGTGGTGAATGGGCTGAGCAAAGACTCTTTATTTGTGCACTGCAAATCCAAAGACAATGACGTTGGCTTACACAACTTGGCTCGTGGATTTGAAATCC
AATGGAGCTTTGATGAGAACGTTTGGGGGACGACACTATTTTGGTGCTTCTTGCGGAAGCCCGGTGCCACTGCCTCGTTCGATGTCTTCTGGGTTGAAAGTCGTCATAAT
TGGCTCCACCATAGGTGCGCCGTATTAACTTGTATTTGGATAGCCAAAGATGATGGAATTTACTTGAGAAACAATTCTGATCGCGTCGATGAATTGATTCACAAGTGG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTGTTGCTTGTGTTGGCAGGTCTGTTGGTGGTGGCTGATCAACAAATAATAACCCAAATAGGGCAGGCACTGAAAAACATACCTGTAAAGAATCCTGATACAGC
TTGGCACATTCATGTGGTGAATGGGCTGAGCAAAGACTCTTTATTTGTGCACTGCAAATCCAAAGACAATGACGTTGGCTTACACAACTTGGCTCGTGGATTTGAAATCC
AATGGAGCTTTGATGAGAACGTTTGGGGGACGACACTATTTTGGTGCTTCTTGCGGAAGCCCGGTGCCACTGCCTCGTTCGATGTCTTCTGGGTTGAAAGTCGTCATAAT
TGGCTCCACCATAGGTGCGCCGTATTAACTTGTATTTGGATAGCCAAAGATGATGGAATTTACTTGAGAAACAATTCTGATCGCGTCGATGAATTGATTCACAAGTGG
Protein sequenceShow/hide protein sequence
MVLLLVLAGLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHN
WLHHRCAVLTCIWIAKDDGIYLRNNSDRVDELIHKW