; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017368 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017368
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold322:279807..280244
RNA-Seq ExpressionMS017368
SyntenyMS017368
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143645.1 S-protein homolog 1-like [Momordica charantia]6.1e-4157.04Show/hide
Query:  VLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNL-ARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDVFW
        V   + +V++   V Q+G A        P   WHIHVVNGLS+ +LFVHC+SKD+D+G+HNL  RG E QW+F  N W TTL+WC+L+KP A VSF+ FW
Subjt:  VLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNL-ARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDVFW

Query:  VESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW
        VE  H WL YRC    CIW AKDDGIYLRNN D VDE IH+W
Subjt:  VESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW

XP_022143724.1 S-protein homolog 1-like [Momordica charantia]1.5e-4261.22Show/hide
Query:  MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSF
        +VLL VLA L V   Q  V  +       P    D  WH+HVVNGLS  +LF HC+S+D D+G HNL RG EIQWSF ENVWGTTLFWCFL+KPG + SF
Subjt:  MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSF

Query:  DVFWVESRHNWLHYRCA-VLTCIWIAKDDGIYLRNNSDHVDELIHKW
        DVFW E  H WLHYRC    TCIW AKDDGIY+RN  D++DEL+HKW
Subjt:  DVFWVESRHNWLHYRCA-VLTCIWIAKDDGIYLRNNSDHVDELIHKW

XP_022148919.1 S-protein homolog 1-like [Momordica charantia]2.8e-7892.47Show/hide
Query:  MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSF
        MVLLLVLA+LLVVADQQI+ QIGQA+KNIPVKNPDTAWHIHVVNGLS+DSLFVHC+SKDND+GLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGAT SF
Subjt:  MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSF

Query:  DVFWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW
        DVFWVESRHNWLH+RCA+LTCIWIAKDDGIYLRNNSDH+DELIHKW
Subjt:  DVFWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW

XP_022155209.1 S-protein homolog 1-like [Momordica charantia]8.9e-4054.05Show/hide
Query:  MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSF
        MV+LLV + L+VV  QQ++P +    K+   ++    W ++V NGLS + LF+HC+SKD DIG  NL  G +IQW F  N WGTTL+WCF+RK   +VS 
Subjt:  MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSF

Query:  DVFWVESRHNWLHYRCA--VLTCIWIAKDDGIYLRNNSDHVDELIHKW
        DVFWVE + +WL  RCA   ++CIWIAKDDGIY+RN S++VDE+IHKW
Subjt:  DVFWVESRHNWLHYRCA--VLTCIWIAKDDGIYLRNNSDHVDELIHKW

XP_038896407.1 S-protein homolog 1-like [Benincasa hispida]5.2e-4055.78Show/hide
Query:  MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIG-LHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVS
        MV  LVL  L+++    +        K  PV  P   WH+HVVNGL   +LFVHC+SKD+D+G  H ++ G E QWSF  N+W TTL+WC L KP A VS
Subjt:  MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIG-LHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVS

Query:  FDVFWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW
        FD FWVE RH WLHYRC    C W+AKDDGIYLRNN D VDE +HKW
Subjt:  FDVFWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW

TrEMBL top hitse value%identityAlignment
A0A6J1CPC6 S-protein homolog3.0e-4157.04Show/hide
Query:  VLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNL-ARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDVFW
        V   + +V++   V Q+G A        P   WHIHVVNGLS+ +LFVHC+SKD+D+G+HNL  RG E QW+F  N W TTL+WC+L+KP A VSF+ FW
Subjt:  VLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNL-ARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDVFW

Query:  VESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW
        VE  H WL YRC    CIW AKDDGIYLRNN D VDE IH+W
Subjt:  VESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW

A0A6J1CQ65 S-protein homolog7.1e-4361.22Show/hide
Query:  MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSF
        +VLL VLA L V   Q  V  +       P    D  WH+HVVNGLS  +LF HC+S+D D+G HNL RG EIQWSF ENVWGTTLFWCFL+KPG + SF
Subjt:  MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSF

Query:  DVFWVESRHNWLHYRCA-VLTCIWIAKDDGIYLRNNSDHVDELIHKW
        DVFW E  H WLHYRC    TCIW AKDDGIY+RN  D++DEL+HKW
Subjt:  DVFWVESRHNWLHYRCA-VLTCIWIAKDDGIYLRNNSDHVDELIHKW

A0A6J1D5G6 S-protein homolog1.4e-7892.47Show/hide
Query:  MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSF
        MVLLLVLA+LLVVADQQI+ QIGQA+KNIPVKNPDTAWHIHVVNGLS+DSLFVHC+SKDND+GLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGAT SF
Subjt:  MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSF

Query:  DVFWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW
        DVFWVESRHNWLH+RCA+LTCIWIAKDDGIYLRNNSDH+DELIHKW
Subjt:  DVFWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW

A0A6J1DPK8 S-protein homolog4.3e-4054.05Show/hide
Query:  MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSF
        MV+LLV + L+VV  QQ++P +    K+   ++    W ++V NGLS + LF+HC+SKD DIG  NL  G +IQW F  N WGTTL+WCF+RK   +VS 
Subjt:  MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSF

Query:  DVFWVESRHNWLHYRCA--VLTCIWIAKDDGIYLRNNSDHVDELIHKW
        DVFWVE + +WL  RCA   ++CIWIAKDDGIY+RN S++VDE+IHKW
Subjt:  DVFWVESRHNWLHYRCA--VLTCIWIAKDDGIYLRNNSDHVDELIHKW

A0A6J1H9E9 S-protein homolog3.6e-3952.78Show/hide
Query:  LLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLAR-GFEIQWSFDENVWGTTLFWCFLRKPGATVSFDV
        L   A LL +    +   +  A+  +P++N    W +HVVN L+  +LFVHC+SKD+D+G HNL   G E QWSF  N+W TTLFWC LRKP A VSF+ 
Subjt:  LLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLAR-GFEIQWSFDENVWGTTLFWCFLRKPGATVSFDV

Query:  FWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW
        FW+E  H WL+YRC    CIW A+DDG+YLRNN D VDE +HKW
Subjt:  FWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW

SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 16.2e-2036.81Show/hide
Query:  LLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSR-DSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDV
        LL +   L +  Q  V   G   ++I V    + W + VVNGL+  ++LF+HC+SK++D+G  NL       W+F EN+  +T FWC++ K    ++ +V
Subjt:  LLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSR-DSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDV

Query:  FWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW
        FW +     L +RC    CIW AK DG+YL N++   D L  KW
Subjt:  FWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW

P0DN92 S-protein homolog 244.9e-0935.05Show/hide
Query:  LFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWC-FLRKPGATVSFDVFWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW
        L +HC+S+D+D+G H LA+G    W F  N   +TL++C F +       F+++    R N   YRCA   C W A+ DGIY  +       L + W
Subjt:  LFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWC-FLRKPGATVSFDVFWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW

Q2HQ46 S-protein homolog 744.0e-1936.11Show/hide
Query:  LLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSR-DSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDV
        +L +   LV+  Q  V       ++I V    + W + V NGL+  ++LF+HC+SK+ND+G  NL       W+F EN+  +TLFWC++ K    ++  V
Subjt:  LLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSR-DSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDV

Query:  FWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW
        FW +     L +RC    C+W AK+DG+YL N++   D L  KW
Subjt:  FWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW

Q9FMQ4 S-protein homolog 32.6e-1028.7Show/hide
Query:  NPDTAWHIHVVNGLSRD-SLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDVFWVESRHNWLHYRCAVLTCIWIAKDDGIY
        N  T+  + + N L    +L +HC+S D+D+GL  LA      + F  ++ GTTLF+C    PG +  FD++  +   + +    + + CIW     G  
Subjt:  NPDTAWHIHVVNGLSRD-SLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDVFWVESRHNWLHYRCAVLTCIWIAKDDGIY

Query:  LRNNSDHVDELIHKW
        + + SDH   + + W
Subjt:  LRNNSDHVDELIHKW

Q9LW22 S-protein homolog 211.1e-0832.14Show/hide
Query:  LATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWC-------FLRKPGATV-
        L+  L V    ++  +      I VKN         +N  +++ L VHC+SK+NDIG+  L  G  + +SF  N WGTT FWC       + R  G T  
Subjt:  LATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWC-------FLRKPGATV-

Query:  -SFDVFWVE-SRHNWLHYRCAVLTCIWIAKDDGIYLRNNS
         +  +F  + S +NWL            A+DDGIY   +S
Subjt:  -SFDVFWVE-SRHNWLHYRCAVLTCIWIAKDDGIYLRNNS

Arabidopsis top hitse value%identityAlignment
AT2G06090.1 Plant self-incompatibility protein S1 family1.5e-1336.7Show/hide
Query:  IHVVNGLSR--DSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDVFWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSD
        +H  N  SR  D L VHC+SKD+D+G+H +AR +E  + F+++V+G T F+C L   G    + V +   +          +  IW A DDGIYL  + D
Subjt:  IHVVNGLSR--DSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDVFWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSD

Query:  HVDELIHKW
        H    I+ W
Subjt:  HVDELIHKW

AT3G26880.1 Plant self-incompatibility protein S1 family7.8e-1032.14Show/hide
Query:  LATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWC-------FLRKPGATV-
        L+  L V    ++  +      I VKN         +N  +++ L VHC+SK+NDIG+  L  G  + +SF  N WGTT FWC       + R  G T  
Subjt:  LATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWC-------FLRKPGATV-

Query:  -SFDVFWVE-SRHNWLHYRCAVLTCIWIAKDDGIYLRNNS
         +  +F  + S +NWL            A+DDGIY   +S
Subjt:  -SFDVFWVE-SRHNWLHYRCAVLTCIWIAKDDGIYLRNNS

AT4G16295.1 S-protein homologue 14.4e-2136.81Show/hide
Query:  LLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSR-DSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDV
        LL +   L +  Q  V   G   ++I V    + W + VVNGL+  ++LF+HC+SK++D+G  NL       W+F EN+  +T FWC++ K    ++ +V
Subjt:  LLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSR-DSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDV

Query:  FWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW
        FW +     L +RC    CIW AK DG+YL N++   D L  KW
Subjt:  FWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW

AT4G29035.1 Plant self-incompatibility protein S1 family2.9e-2036.11Show/hide
Query:  LLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSR-DSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDV
        +L +   LV+  Q  V       ++I V    + W + V NGL+  ++LF+HC+SK+ND+G  NL       W+F EN+  +TLFWC++ K    ++  V
Subjt:  LLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSR-DSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDV

Query:  FWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW
        FW +     L +RC    C+W AK+DG+YL N++   D L  KW
Subjt:  FWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW

AT5G04347.1 Plant self-incompatibility protein S1 family9.2e-1135.24Show/hide
Query:  VVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDVFWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDE
        V N L+   L V C+SKD+++G H L  G   + +FD+NVW  TLFWC L K G      V +   R  W          +WIA++DGIY   + +   +
Subjt:  VVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDVFWVESRHNWLHYRCAVLTCIWIAKDDGIYLRNNSDHVDE

Query:  LIHKW
          + W
Subjt:  LIHKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTGTTGCTTGTGTTGGCGACTCTGTTGGTGGTGGCTGATCAACAAATAGTTCCACAGATAGGGCAGGCCGTGAAAAACATACCTGTAAAGAATCCTGATACGGC
TTGGCACATTCATGTGGTGAATGGTCTGAGCAGAGACTCTTTATTTGTGCACTGTCAGTCCAAAGACAACGACATTGGCTTACACAACTTGGCTCGGGGATTTGAAATCC
AATGGAGCTTTGATGAGAACGTCTGGGGGACGACACTGTTTTGGTGCTTCTTGCGGAAGCCGGGTGCCACCGTCTCGTTCGATGTCTTTTGGGTTGAAAGTCGTCATAAT
TGGCTACACTATAGGTGCGCCGTATTAACTTGTATTTGGATAGCTAAAGATGATGGAATTTACTTGAGAAACAATTCGGATCATGTTGATGAATTGATTCATAAGTGG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTGTTGCTTGTGTTGGCGACTCTGTTGGTGGTGGCTGATCAACAAATAGTTCCACAGATAGGGCAGGCCGTGAAAAACATACCTGTAAAGAATCCTGATACGGC
TTGGCACATTCATGTGGTGAATGGTCTGAGCAGAGACTCTTTATTTGTGCACTGTCAGTCCAAAGACAACGACATTGGCTTACACAACTTGGCTCGGGGATTTGAAATCC
AATGGAGCTTTGATGAGAACGTCTGGGGGACGACACTGTTTTGGTGCTTCTTGCGGAAGCCGGGTGCCACCGTCTCGTTCGATGTCTTTTGGGTTGAAAGTCGTCATAAT
TGGCTACACTATAGGTGCGCCGTATTAACTTGTATTTGGATAGCTAAAGATGATGGAATTTACTTGAGAAACAATTCGGATCATGTTGATGAATTGATTCATAAGTGG
Protein sequenceShow/hide protein sequence
MVLLLVLATLLVVADQQIVPQIGQAVKNIPVKNPDTAWHIHVVNGLSRDSLFVHCQSKDNDIGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATVSFDVFWVESRHN
WLHYRCAVLTCIWIAKDDGIYLRNNSDHVDELIHKW