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MS017371 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017371
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionB-box type zinc finger family protein
Genome locationscaffold322:325767..325919
RNA-Seq ExpressionMS017371
SyntenyMS017371
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603735.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]8.8e-1165.38Show/hide
Query:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA
        +KKLC  C  +A V+C  D+ RLCWGCD KVH A FL+GKHLRVLL H CQA
Subjt:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA

TYK13089.1 putative zinc finger protein [Cucumis melo var. makuwa]1.3e-0963.46Show/hide
Query:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA
        +KKLC  C  +A V+C  D   LCWGCD KVH A FL+GKHLRVLL H CQA
Subjt:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA

XP_022950367.1 putative zinc finger protein At1g68190 [Cucurbita moschata]8.8e-1165.38Show/hide
Query:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA
        +KKLC  C  +A V+C  D+ RLCWGCD KVH A FL+GKHLRVLL H CQA
Subjt:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA

XP_022977340.1 zinc finger protein CONSTANS-LIKE 13-like [Cucurbita maxima]2.0e-1065.38Show/hide
Query:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA
        +KKLC  C  +A V+C  DE RLCWGCD KVH A FL+GKH RVLL H CQA
Subjt:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA

XP_023544021.1 zinc finger protein CONSTANS-LIKE 13-like [Cucurbita pepo subsp. pepo]8.8e-1165.38Show/hide
Query:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA
        +KKLC  C  +A V+C  D+ RLCWGCD KVH A FL+GKHLRVLL H CQA
Subjt:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA

TrEMBL top hitse value%identityAlignment
A0A1S3B3D3 putative zinc finger protein At1g681906.1e-1063.46Show/hide
Query:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA
        +KKLC  C  +A V+C  D   LCWGCD KVH A FL+GKHLRVLL H CQA
Subjt:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA

A0A5A7UBH5 Putative zinc finger protein6.1e-1063.46Show/hide
Query:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA
        +KKLC  C  +A V+C  D   LCWGCD KVH A FL+GKHLRVLL H CQA
Subjt:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA

A0A5D3CS61 Putative zinc finger protein6.1e-1063.46Show/hide
Query:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA
        +KKLC  C  +A V+C  D   LCWGCD KVH A FL+GKHLRVLL H CQA
Subjt:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA

A0A6J1GEL4 putative zinc finger protein At1g681904.3e-1165.38Show/hide
Query:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA
        +KKLC  C  +A V+C  D+ RLCWGCD KVH A FL+GKHLRVLL H CQA
Subjt:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA

A0A6J1IM17 zinc finger protein CONSTANS-LIKE 13-like9.5e-1165.38Show/hide
Query:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA
        +KKLC  C  +A V+C  DE RLCWGCD KVH A FL+GKH RVLL H CQA
Subjt:  IKKLC-TCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA

SwissProt top hitse value%identityAlignment
Q9SYM2 B-box zinc finger protein 227.5e-0557.14Show/hide
Query:  ANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLL
        A V+C  DE  LCW CD K+H A  L GKH RV L
Subjt:  ANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLL

Arabidopsis top hitse value%identityAlignment
AT1G78600.1 light-regulated zinc finger protein 15.3e-0657.14Show/hide
Query:  ANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLL
        A V+C  DE  LCW CD K+H A  L GKH RV L
Subjt:  ANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLL

AT1G78600.2 light-regulated zinc finger protein 15.3e-0657.14Show/hide
Query:  ANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLL
        A V+C  DE  LCW CD K+H A  L GKH RV L
Subjt:  ANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLL

AT4G27310.1 B-box type zinc finger family protein5.1e-0948Show/hide
Query:  KKLCTCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA
        KK   C  +A + C  D+  LCW CD KVH A FL+ KH R LL   CQ+
Subjt:  KKLCTCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA

AT4G39070.1 B-box zinc finger family protein1.0e-0455.26Show/hide
Query:  KSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLL
        K  A+V C  DE  LC GCD  VH A  L GKHLR  L
Subjt:  KSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLL

AT5G54470.1 B-box type zinc finger family protein6.7e-0948Show/hide
Query:  KKLCTCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA
        KK   C  +A + C  D+  LCW CD KVH A FL+ KH+R LL   CQ+
Subjt:  KKLCTCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCAAAAAATTGTGCACGTGCAAGTCTCTGGCGAATGTGGTGTGTGGAGTGGACGAAACGAGGCTGTGTTGGGGGTGCGATTGGAAGGTCCACGACGCCAAATTTCTAAT
GGGGAAACATTTGAGGGTTTTACTCTTCCATCGCTGCCAAGCT
mRNA sequenceShow/hide mRNA sequence
ATCAAAAAATTGTGCACGTGCAAGTCTCTGGCGAATGTGGTGTGTGGAGTGGACGAAACGAGGCTGTGTTGGGGGTGCGATTGGAAGGTCCACGACGCCAAATTTCTAAT
GGGGAAACATTTGAGGGTTTTACTCTTCCATCGCTGCCAAGCT
Protein sequenceShow/hide protein sequence
IKKLCTCKSLANVVCGVDETRLCWGCDWKVHDAKFLMGKHLRVLLFHRCQA