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MS017376 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017376
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold322:460510..460755
RNA-Seq ExpressionMS017376
SyntenyMS017376
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607144.1 E3 ubiquitin-protein ligase WAV3, partial [Cucurbita argyrosperma subsp. sororia]3.2e-0762.16Show/hide
Query:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAPIAAMSTSSSSGLQLSVSSTRSSK
        GST KK+KVA GFNMC  GP+NL++SLP  A+R SD   PS+LLS P      A  TSS+S LQLS SSTRSSK
Subjt:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAPIAAMSTSSSSGLQLSVSSTRSSK

KAG7036830.1 hypothetical protein SDJN02_00450 [Cucurbita argyrosperma subsp. argyrosperma]3.2e-0762.16Show/hide
Query:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAPIAAMSTSSSSGLQLSVSSTRSSK
        GST KK+KVA GFNMC  GP+NL++SLP  A+R SD   PS+LLS P      A  TSS+S LQLS SSTRSSK
Subjt:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAPIAAMSTSSSSGLQLSVSSTRSSK

XP_004139556.1 E3 ubiquitin-protein ligase WAV3 [Cucumis sativus]2.4e-0761.04Show/hide
Query:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAP---IAAMSTSSSSGLQLSVSSTRSSK
        GST KK+KVA G NMC  GP+NL +SLP  ASRSSD V P +LLS    +     +A  TSSSSGL+LS SSTRSSK
Subjt:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAP---IAAMSTSSSSGLQLSVSSTRSSK

XP_022152920.1 uncharacterized protein LOC111020532 [Momordica charantia]1.1e-0763.16Show/hide
Query:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAPIA--AMSTSSSSGLQLSVSSTRSSK
        G+T KKLKVA GFNMC  GP+NLD+SLP  ASR SD V PS+ LS          A  TSSSSGL LS SSTRSSK
Subjt:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAPIA--AMSTSSSSGLQLSVSSTRSSK

XP_022949445.1 uncharacterized protein LOC111452787 [Cucurbita moschata]3.2e-0762.16Show/hide
Query:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAPIAAMSTSSSSGLQLSVSSTRSSK
        GST KK+KVA GFNMC  GP+NL++SLP  A+R SD   PS+LLS P      A  TSS+S LQLS SSTRSSK
Subjt:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAPIAAMSTSSSSGLQLSVSSTRSSK

TrEMBL top hitse value%identityAlignment
A0A0A0LXX5 Uncharacterized protein1.2e-0761.04Show/hide
Query:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAP---IAAMSTSSSSGLQLSVSSTRSSK
        GST KK+KVA G NMC  GP+NL +SLP  ASRSSD V P +LLS    +     +A  TSSSSGL+LS SSTRSSK
Subjt:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAP---IAAMSTSSSSGLQLSVSSTRSSK

A0A1S3CHN5 uncharacterized protein LOC103501034 isoform X11.5e-0761.04Show/hide
Query:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAP---IAAMSTSSSSGLQLSVSSTRSSK
        GST KK+KVA G NMC  GP+NL +SLP  ASRSSD   P +LLS    +     AA  TSSSSGL+LS SSTRSSK
Subjt:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAP---IAAMSTSSSSGLQLSVSSTRSSK

A0A5A7SVZ9 Uncharacterized protein1.5e-0761.04Show/hide
Query:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAP---IAAMSTSSSSGLQLSVSSTRSSK
        GST KK+KVA G NMC  GP+NL +SLP  ASRSSD   P +LLS    +     AA  TSSSSGL+LS SSTRSSK
Subjt:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAP---IAAMSTSSSSGLQLSVSSTRSSK

A0A6J1DFB3 uncharacterized protein LOC1110205325.3e-0863.16Show/hide
Query:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAPIA--AMSTSSSSGLQLSVSSTRSSK
        G+T KKLKVA GFNMC  GP+NLD+SLP  ASR SD V PS+ LS          A  TSSSSGL LS SSTRSSK
Subjt:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAPIA--AMSTSSSSGLQLSVSSTRSSK

A0A6J1GCS4 uncharacterized protein LOC1114527871.5e-0762.16Show/hide
Query:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAPIAAMSTSSSSGLQLSVSSTRSSK
        GST KK+KVA GFNMC  GP+NL++SLP  A+R SD   PS+LLS P      A  TSS+S LQLS SSTRSSK
Subjt:  GSTRKKLKVAFGFNMC-RGPQNLDNSLPD-ASRSSDVVTPSSLLSRPVLAPIAAMSTSSSSGLQLSVSSTRSSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGGGTAGCACACGGAAGAAACTGAAGGTTGCTTTCGGCTTCAACATGTGCCGTGGCCCTCAAAATCTGGACAATTCCTTGCCTGATGCTTCTAGGTCTTCTGACGTTGT
GACACCATCCAGTTTGCTTTCTCGGCCAGTTTTGGCTCCGATTGCGGCCATGTCCACTTCGTCATCTTCCGGTCTCCAGCTCTCCGTGTCCTCGACGAGATCCTCAAAAC
TTTGTTCGGTCTCTTTTGTT
mRNA sequenceShow/hide mRNA sequence
ACGGGTAGCACACGGAAGAAACTGAAGGTTGCTTTCGGCTTCAACATGTGCCGTGGCCCTCAAAATCTGGACAATTCCTTGCCTGATGCTTCTAGGTCTTCTGACGTTGT
GACACCATCCAGTTTGCTTTCTCGGCCAGTTTTGGCTCCGATTGCGGCCATGTCCACTTCGTCATCTTCCGGTCTCCAGCTCTCCGTGTCCTCGACGAGATCCTCAAAAC
TTTGTTCGGTCTCTTTTGTT
Protein sequenceShow/hide protein sequence
TGSTRKKLKVAFGFNMCRGPQNLDNSLPDASRSSDVVTPSSLLSRPVLAPIAAMSTSSSSGLQLSVSSTRSSKLCSVSFV