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MS017392 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017392
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionThreonine-tRNA ligase
Genome locationscaffold1474:69291..71297
RNA-Seq ExpressionMS017392
SyntenyMS017392
Gene Ontology termsGO:0016874 - ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595681.1 hypothetical protein SDJN03_12234, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2482.89Show/hide
Query:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
        MAEPL GG HDLEQ+LKPF++RASEAEDRLSRLEA LLSKKD  DEEHLKTI+ELQSKLDSANEALIAE+KKA  +
Subjt:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
XP_008464608.1 PREDICTED: uncharacterized protein LOC103502450 isoform X1 [Cucumis melo]1.4e-2378.31Show/hide
Query:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI--QCCCF
        MAEP  GG HDLEQ+LKPFFQRAS+AEDRLSRLEA LLSKKD  +EEHLKTI+ELQ+KLDSAN ALI ERKKAS I   C CF
Subjt:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI--QCCCF
XP_022153876.1 uncharacterized protein LOC111021288 [Momordica charantia]1.6e-3096.05Show/hide
Query:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
        MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKA  +
Subjt:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
XP_022925102.1 uncharacterized protein LOC111432443 [Cucurbita moschata]1.3e-2482.89Show/hide
Query:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
        MAEPL GG HDLEQ+LKPF++RASEAEDRLSRLEA LLSKKD  DEEHLKTI+ELQSKLDSANEALIAE+KKA  +
Subjt:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
XP_022966502.1 uncharacterized protein LOC111466136 [Cucurbita maxima]4.5e-2584.21Show/hide
Query:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
        MAEPL GG HDLEQ+LKPF+QRASEAEDRLSRLEA LLSKKD  DEEHLKTI+ELQSKLDSANEALIAE+KKA  +
Subjt:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
TrEMBL top hitse value%identityAlignment
A0A1S3CLW0 uncharacterized protein LOC103502450 isoform X21.0e-2278.95Show/hide
Query:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
        MAEP  GG HDLEQ+LKPFFQRAS+AEDRLSRLEA LLSKKD  +EEHLKTI+ELQ+KLDSAN ALI ERKKA  +
Subjt:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
A0A1S3CM07 uncharacterized protein LOC103502450 isoform X17.0e-2478.31Show/hide
Query:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI--QCCCF
        MAEP  GG HDLEQ+LKPFFQRAS+AEDRLSRLEA LLSKKD  +EEHLKTI+ELQ+KLDSAN ALI ERKKAS I   C CF
Subjt:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI--QCCCF
A0A6J1DM00 uncharacterized protein LOC1110212887.7e-3196.05Show/hide
Query:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
        MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKA  +
Subjt:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
A0A6J1EAW7 uncharacterized protein LOC1114324436.3e-2582.89Show/hide
Query:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
        MAEPL GG HDLEQ+LKPF++RASEAEDRLSRLEA LLSKKD  DEEHLKTI+ELQSKLDSANEALIAE+KKA  +
Subjt:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
A0A6J1HN54 uncharacterized protein LOC1114661362.2e-2584.21Show/hide
Query:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
        MAEPL GG HDLEQ+LKPF+QRASEAEDRLSRLEA LLSKKD  DEEHLKTI+ELQSKLDSANEALIAE+KKA  +
Subjt:  MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G57320.1 unknown protein1.5e-0744.12Show/hide
Query:  HDLEQSLKPFFQRASEAEDRLSRLEATLLS-KKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
        H L ++LKPFF RA+EA++RL++LEA L S K D  D + ++   +LQSKL+ AN  +  E+ K   +
Subjt:  HDLEQSLKPFFQRASEAEDRLSRLEATLLS-KKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
AT3G57320.2 unknown protein2.0e-0745.59Show/hide
Query:  HDLEQSLKPFFQRASEAEDRLSRLEATLLS-KKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI
        H L ++LKPFF RA+EA++RL++LEA L S K D  D + ++   +LQSKL+ AN  +  E+ K  S+
Subjt:  HDLEQSLKPFFQRASEAEDRLSRLEATLLS-KKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAACCATTAAGAGGCGGCGGCCACGATCTGGAGCAGAGCTTGAAGCCCTTCTTTCAAAGAGCCTCCGAGGCCGAGGATCGTTTGTCGAGACTAGAAGCCACACT
TTTGAGCAAGAAAGATACCTGGGACGAGGAACATCTTAAAACGATTGCCGAACTTCAGTCAAAGCTAGACAGTGCAAATGAAGCGCTAATCGCTGAACGAAAAAAGGCGA
GTAGCATTCAGTGTTGTTGTTTT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAACCATTAAGAGGCGGCGGCCACGATCTGGAGCAGAGCTTGAAGCCCTTCTTTCAAAGAGCCTCCGAGGCCGAGGATCGTTTGTCGAGACTAGAAGCCACACT
TTTGAGCAAGAAAGATACCTGGGACGAGGAACATCTTAAAACGATTGCCGAACTTCAGTCAAAGCTAGACAGTGCAAATGAAGCGCTAATCGCTGAACGAAAAAAGGCGA
GTAGCATTCAGTGTTGTTGTTTT
Protein sequenceShow/hide protein sequence
MAEPLRGGGHDLEQSLKPFFQRASEAEDRLSRLEATLLSKKDTWDEEHLKTIAELQSKLDSANEALIAERKKASSIQCCCF