CuGenDBv2

Gene ID	MS017394
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	scaffold1474:93027..93164
RNA-Seq Expression	MS017394
Synteny	MS017394
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

QOP63850.1 photosystem I P700 apoprotein A2 [Lycopus lucidus var. hirtus]

2.8e-16

93.33

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        L+TLLGGFHPQ QSLWLTDIAHHHLAIAFIFL+AGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

YP_009141076.1 photosystem I P700 apoprotein A2 [Sartidia perrieri]

3.7e-16

93.33

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        ++TLLGGFHPQ QSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

YP_009246272.1 photosystem I P700 apoprotein A2 [Tenaxia guillarmodiae]

3.7e-16

93.33

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        ++TLLGGFHPQ QSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

YP_009338836.1 photosystem I P700 apoprotein A2 [Psidium guajava]

3.7e-16

93.33

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        ++TLLGGFHPQ QSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

YP_009689241.1 photosystem I P700 apoprotein A2 [Hopea hainanensis]

3.7e-16

93.33

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        ++TLLGGFHPQ QSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

TrEMBL top hits

e value

%identity

Alignment

A0A0F6PZB7 Photosystem I P700 chlorophyll a apoprotein A2

1.8e-16

93.33

Show/hide

Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        ++TLLGGFHPQ QSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

A0A193D4C4 Photosystem I P700 chlorophyll a apoprotein A2

1.8e-16

93.33

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        ++TLLGGFHPQ QSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

A0A1Y0AK10 Photosystem I P700 chlorophyll a apoprotein A2

1.8e-16

93.33

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        ++TLLGGFHPQ QSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

A0A510B7J0 Photosystem I P700 chlorophyll a apoprotein A2

1.8e-16

93.33

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        ++TLLGGFHPQ QSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

A0A7M1CHG0 Photosystem I P700 chlorophyll a apoprotein A2

1.4e-16

93.33

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        L+TLLGGFHPQ QSLWLTDIAHHHLAIAFIFL+AGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

SwissProt top hits

e value

%identity

Alignment

A1EA07 Photosystem I P700 chlorophyll a apoprotein A2

4.8e-19

93.33

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        ++TLLGGFHPQ QSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

P04967 Photosystem I P700 chlorophyll a apoprotein A2

4.8e-19

93.33

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        ++TLLGGFHPQ QSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

P0C356 Photosystem I P700 chlorophyll a apoprotein A2

4.8e-19

93.33

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        ++TLLGGFHPQ QSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

Q09X18 Photosystem I P700 chlorophyll a apoprotein A2

4.8e-19

93.33

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        ++TLLGGFHPQ QSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

Q6ENH5 Photosystem I P700 chlorophyll a apoprotein A2

4.8e-19

93.33

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        ++TLLGGFHPQ QSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

6.5e-19

86.67

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Query:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        ++TLLGGFHPQ QSLWLTD+AHHHLAIA +FLIAGHMYRTNFGIG
Subjt:  LITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

ATCG00350.1 Photosystem I, PsaA/PsaB protein

8.2e-14

69.57

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Query:  DLITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG
        + +T  GG  P    LWLTDIAHHHLAIA +FLIAGHMYRTN+GIG
Subjt:  DLITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

Sequences

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CDS sequence

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GATTTAATAACCCTTCTCGGGGGATTCCATCCGCAAATGCAAAGTTTATGGCTGACTGATATTGCTCATCATCATTTAGCTATTGCATTTATTTTTCTTATTGCTGGTCA
TATGTATAGAACTAACTTCGGGATTGGA

mRNA sequence

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GATTTAATAACCCTTCTCGGGGGATTCCATCCGCAAATGCAAAGTTTATGGCTGACTGATATTGCTCATCATCATTTAGCTATTGCATTTATTTTTCTTATTGCTGGTCA
TATGTATAGAACTAACTTCGGGATTGGA

Protein sequence

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DLITLLGGFHPQMQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIG

MS017394 (gene) of Bitter gourd (TR) v1 genome