; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017395 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017395
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic
Genome locationscaffold1474:93378..93635
RNA-Seq ExpressionMS017395
SyntenyMS017395
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OTF84446.1 putative NAD(P)H-quinone oxidoreductase subunit 2 A protein [Helianthus annuus]4.6e-2890.36Show/hide
Query:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        VRNPLFDSNS TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

OTF84492.1 putative NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit [Helianthus annuus]4.6e-2890.36Show/hide
Query:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        VRNPLFDSNS TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

PLY80826.1 hypothetical protein LSAT_3X112740 [Lactuca sativa]4.6e-2890.36Show/hide
Query:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        VRNPLFDSNS TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

YP_009503683.1 NADH-plastoquinone oxidoreductase subunit 2 [Pluchea indica]4.6e-2890.36Show/hide
Query:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        VRNPLFDSNS TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

YP_009912295.1 NdhB [Fulcaldea stuessyi]4.6e-2890.36Show/hide
Query:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        VRNPLFDSNS TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

TrEMBL top hitse value%identityAlignment
A0A1Y3BX13 NADH-quinone oxidoreductase subunit N2.2e-2890.36Show/hide
Query:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        VRNPLFDSNS TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

A0A344AV99 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic2.2e-2890.36Show/hide
Query:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        VRNPLFDSNS TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

A0A5J6RKU3 NADH-quinone oxidoreductase subunit N2.2e-2890.36Show/hide
Query:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        VRNPLFDSNS TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

A0A7D5FEF1 NADH-quinone oxidoreductase subunit N2.2e-2890.36Show/hide
Query:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        VRNPLFDSNS TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

A0A7D5FFD4 NADH-quinone oxidoreductase subunit N2.2e-2890.36Show/hide
Query:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        VRNPLFDSNS TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

SwissProt top hitse value%identityAlignment
P0CC20 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic2.9e-2589.19Show/hide
Query:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        S TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

P0CC21 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic2.9e-2589.19Show/hide
Query:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        S TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

P0CC34 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic2.9e-2589.19Show/hide
Query:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        S TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

P0CC38 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic2.9e-2589.19Show/hide
Query:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        S TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

P0CC40 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic2.9e-2589.19Show/hide
Query:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        S TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMIL NLIAITQTSMKRMLA SSIGQ+G
Subjt:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

Arabidopsis top hitse value%identityAlignment
AT2G07689.1 NADH-Ubiquinone/plastoquinone (complex I) protein7.6e-0542.86Show/hide
Query:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMGILR
        S TPV AFLS+  K+  SA+  R+  I  S+ +    +     +I SMIL  L A+ QT +KR LA SSIG +G +R
Subjt:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMGILR

ATCG00890.1 NADH-Ubiquinone/plastoquinone (complex I) protein6.0e-2687.84Show/hide
Query:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        S TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMI  NLIAITQTSMKRMLA SSIGQ+G
Subjt:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

ATCG01250.1 NADH-Ubiquinone/plastoquinone (complex I) protein6.0e-2687.84Show/hide
Query:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG
        S TPVVAFLSVTSKV ASASATRIFDIP  FSSNEWHLL+EILAILSMI  NLIAITQTSMKRMLA SSIGQ+G
Subjt:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMG

ATMG00285.1 NADH dehydrogenase 2A7.6e-0542.86Show/hide
Query:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMGILR
        S TPV AFLS+  K+  SA+  R+  I  S+ +    +     +I SMIL  L A+ QT +KR LA SSIG +G +R
Subjt:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMGILR

ATMG01320.1 NADH dehydrogenase 2B7.6e-0542.86Show/hide
Query:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMGILR
        S TPV AFLS+  K+  SA+  R+  I  S+ +    +     +I SMIL  L A+ QT +KR LA SSIG +G +R
Subjt:  SSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMGILR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGAGGAATCCTCTTTTCGACTCTAACTCTTCCACTCCAGTCGTTGCTTTTCTTTCTGTTACTTCGAAAGTAGTTGCTTCAGCTTCAGCCACTCGAATTTTCGATATTCC
TTCTTCTTTCTCATCAAACGAATGGCATCTTCTGATGGAAATCCTAGCTATTCTTAGCATGATATTGAGGAATCTCATTGCTATTACTCAAACAAGCATGAAACGTATGC
TTGCGTCTTCGTCCATAGGTCAAATGGGAATTCTTCGA
mRNA sequenceShow/hide mRNA sequence
GTGAGGAATCCTCTTTTCGACTCTAACTCTTCCACTCCAGTCGTTGCTTTTCTTTCTGTTACTTCGAAAGTAGTTGCTTCAGCTTCAGCCACTCGAATTTTCGATATTCC
TTCTTCTTTCTCATCAAACGAATGGCATCTTCTGATGGAAATCCTAGCTATTCTTAGCATGATATTGAGGAATCTCATTGCTATTACTCAAACAAGCATGAAACGTATGC
TTGCGTCTTCGTCCATAGGTCAAATGGGAATTCTTCGA
Protein sequenceShow/hide protein sequence
VRNPLFDSNSSTPVVAFLSVTSKVVASASATRIFDIPSSFSSNEWHLLMEILAILSMILRNLIAITQTSMKRMLASSSIGQMGILR