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MS017413 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017413
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1474:281947..282201
RNA-Seq ExpressionMS017413
SyntenyMS017413
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34001.1 hypothetical protein [Cucumis melo subsp. melo]4.6e-1261.25Show/hide
Query:  MAGLQYNFFPTDLLYPKPSQSSSSSEAMNRASVSFKISHHRGNNKVAEEDDHHHGAQPKSLSIQRAEIRPLILKHNQSKN
        MAGLQYNFFPTDLLYPKPS SSSSSEA+NRASV+FK +     NK  E+ DH    + +  S + A+  PLILKH QSK+
Subjt:  MAGLQYNFFPTDLLYPKPSQSSSSSEAMNRASVSFKISHHRGNNKVAEEDDHHHGAQPKSLSIQRAEIRPLILKHNQSKN

KAG6603410.1 hypothetical protein SDJN03_04019, partial [Cucurbita argyrosperma subsp. sororia]5.4e-1364.77Show/hide
Query:  MAGLQYNFFPTDLLYPKP-------SQSSSSSEAMNRASVSFKISHHRGNNKVAEEDDHHHGAQPKSLSIQRAEIRPLILKHNQSKNN
        MAGLQYNFFPTDLLYPKP       S SSSSS+A+NRASV+FK    RGN    EEDDH  GA  KSLSIQ+ +  PLILKH Q KN+
Subjt:  MAGLQYNFFPTDLLYPKP-------SQSSSSSEAMNRASVSFKISHHRGNNKVAEEDDHHHGAQPKSLSIQRAEIRPLILKHNQSKNN

KGN53975.1 hypothetical protein Csa_018873 [Cucumis sativus]5.4e-1363.64Show/hide
Query:  MAGLQYNFFPTDLLYPKPSQSSSSSEAMNRASVSFKISHHRGNNKVAEEDDHHHGAQPKS--LSIQRAEIRPLILKH
        MAGLQYNFFPTDLLYPKPS SSSSSEA+NRASV+FK +  RGN    +++D  HG +PKS  +  Q+ +  PLILKH
Subjt:  MAGLQYNFFPTDLLYPKPSQSSSSSEAMNRASVSFKISHHRGNNKVAEEDDHHHGAQPKS--LSIQRAEIRPLILKH

TrEMBL top hitse value%identityAlignment
A0A0A0KWJ2 Uncharacterized protein2.6e-1363.64Show/hide
Query:  MAGLQYNFFPTDLLYPKPSQSSSSSEAMNRASVSFKISHHRGNNKVAEEDDHHHGAQPKS--LSIQRAEIRPLILKH
        MAGLQYNFFPTDLLYPKPS SSSSSEA+NRASV+FK +  RGN    +++D  HG +PKS  +  Q+ +  PLILKH
Subjt:  MAGLQYNFFPTDLLYPKPSQSSSSSEAMNRASVSFKISHHRGNNKVAEEDDHHHGAQPKS--LSIQRAEIRPLILKH

A0A5A7V9D3 Uncharacterized protein2.2e-1261.25Show/hide
Query:  MAGLQYNFFPTDLLYPKPSQSSSSSEAMNRASVSFKISHHRGNNKVAEEDDHHHGAQPKSLSIQRAEIRPLILKHNQSKN
        MAGLQYNFFPTDLLYPKPS SSSSSEA+NRASV+FK +     NK  E+ DH    + +  S + A+  PLILKH QSK+
Subjt:  MAGLQYNFFPTDLLYPKPSQSSSSSEAMNRASVSFKISHHRGNNKVAEEDDHHHGAQPKSLSIQRAEIRPLILKHNQSKN

E5GC02 Uncharacterized protein2.2e-1261.25Show/hide
Query:  MAGLQYNFFPTDLLYPKPSQSSSSSEAMNRASVSFKISHHRGNNKVAEEDDHHHGAQPKSLSIQRAEIRPLILKHNQSKN
        MAGLQYNFFPTDLLYPKPS SSSSSEA+NRASV+FK +     NK  E+ DH    + +  S + A+  PLILKH QSK+
Subjt:  MAGLQYNFFPTDLLYPKPSQSSSSSEAMNRASVSFKISHHRGNNKVAEEDDHHHGAQPKSLSIQRAEIRPLILKHNQSKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGCCTTCAATACAACTTCTTCCCCACTGATCTTCTTTACCCTAAACCTTCACAATCTTCTTCTTCCTCAGAAGCCATGAATAGGGCAAGTGTGAGCTTCAAAAT
AAGCCATCATAGAGGCAATAATAAAGTAGCTGAAGAAGATGATCATCATCATGGTGCTCAGCCCAAAAGTTTGAGCATTCAAAGGGCAGAAATTAGGCCATTGATTCTCA
AGCATAATCAAAGCAAGAATAATCTTCATCTCTCA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGCCTTCAATACAACTTCTTCCCCACTGATCTTCTTTACCCTAAACCTTCACAATCTTCTTCTTCCTCAGAAGCCATGAATAGGGCAAGTGTGAGCTTCAAAAT
AAGCCATCATAGAGGCAATAATAAAGTAGCTGAAGAAGATGATCATCATCATGGTGCTCAGCCCAAAAGTTTGAGCATTCAAAGGGCAGAAATTAGGCCATTGATTCTCA
AGCATAATCAAAGCAAGAATAATCTTCATCTCTCA
Protein sequenceShow/hide protein sequence
MAGLQYNFFPTDLLYPKPSQSSSSSEAMNRASVSFKISHHRGNNKVAEEDDHHHGAQPKSLSIQRAEIRPLILKHNQSKNNLHLS