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MS017415 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017415
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 5, chloroplastic
Genome locationscaffold1474:300875..301166
RNA-Seq ExpressionMS017415
SyntenyMS017415
Gene Ontology termsGO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALO21756.1 NdhF [Cucurbita argyrosperma]1.4e-1894.23Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
        N  QKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEV LL
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
ALO22793.1 NdhF [Cucurbita pepo subsp. pepo]1.4e-1894.23Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
        N  QKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEV LL
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
ATL76592.1 NADH dehydrogenase subunit 5 [Chenopodium album]3.4e-2063.92Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL---------------NPLNFLFMYGYLMLWRALPPFRLLYMLLRW
        N  QKAFVTNRVGDFGLLLGILG YW TGSFEFRDLF+IF NLI NNEV  L                  NF FMYGYLMLWR L  F+L  MLL W
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL---------------NPLNFLFMYGYLMLWRALPPFRLLYMLLRW
QWV60888.1 NADH-plastoquinone oxidoreductase subunit 5 [Cucurbita ficifolia]1.4e-1894.23Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
        N  QKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEV LL
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
YP_009447583.1 NADH dehydrogenase subunit 5 [Cucurbita moschata]1.4e-1894.23Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
        N  QKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEV LL
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
TrEMBL top hitse value%identityAlignment
A0A291S829 NADH dehydrogenase subunit 51.6e-2063.92Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL---------------NPLNFLFMYGYLMLWRALPPFRLLYMLLRW
        N  QKAFVTNRVGDFGLLLGILG YW TGSFEFRDLF+IF NLI NNEV  L                  NF FMYGYLMLWR L  F+L  MLL W
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL---------------NPLNFLFMYGYLMLWRALPPFRLLYMLLRW
A0A515BLN2 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic6.8e-1994.23Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
        N  QKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEV LL
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
A0A6H0ERV9 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic6.8e-1994.23Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
        N  QKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEV LL
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
A0A6H0ETU0 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic6.8e-1994.23Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
        N  QKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEV LL
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
A0A6M3RU93 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic6.8e-1994.23Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
        N  QKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEV LL
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
SwissProt top hitse value%identityAlignment
B1NWJ6 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic7.8e-2081.67Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLLNPLNFLFM
        N  QKAFVTNRVGDFGLLLGILGLYW TGSFEFRDLFKIFNNLIYNN+V      NFLF+
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLLNPLNFLFM
P06265 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic2.3e-1986.54Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
        N  QKAFVTNRVGDFGLLLGILG YW TGSFEFRDLF+IFNNLIYNNEV  L
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
Q2QD43 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic2.3e-1981.67Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLLNPLNFLFM
        N  QKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLF+IFNNLI NNEV      NFLF+
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLLNPLNFLFM
Q31952 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (Fragment)3.0e-1980Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLLNPLNFLFM
        N  QKAFVTNRVGDFGLLLGILG YW TGSFEFRDLF+IFNNLIYNNEV      NFLF+
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLLNPLNFLFM
Q3C1N9 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic2.3e-1986.54Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
        N  QKAFVTNRVGDFGLLLGILG YW TGSFEFRDLF+IFNNLIYNNEV  L
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLL
Arabidopsis top hitse value%identityAlignment
ATCG01010.1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein6.7e-1972.31Show/hide
Query:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLLNPLNFLFMYGYLM
        N  QKAFVTNRVGDFGLLLGILGLYW TGSFEF+DLF+IFNNLI NN V LL    FL +  +L+
Subjt:  NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLLNPLNFLFMYGYLM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACACTTTTCAAAAGGCATTTGTAACTAATCGCGTGGGGGATTTTGGTTTATTATTAGGGATTTTAGGTCTTTATTGGACAACGGGGAGTTTTGAATTTCGCGATTTGTT
TAAAATATTCAATAACTTGATTTATAATAATGAGGTGCAGTTGCTAAATCCGCTCAATTTCCTCTTCATGTATGGTTACCTGATGCTATGGAGGGCCCTACCCCCATTTC
GGCTCTTATACATGCTGCTACGATGG
mRNA sequenceShow/hide mRNA sequence
AACACTTTTCAAAAGGCATTTGTAACTAATCGCGTGGGGGATTTTGGTTTATTATTAGGGATTTTAGGTCTTTATTGGACAACGGGGAGTTTTGAATTTCGCGATTTGTT
TAAAATATTCAATAACTTGATTTATAATAATGAGGTGCAGTTGCTAAATCCGCTCAATTTCCTCTTCATGTATGGTTACCTGATGCTATGGAGGGCCCTACCCCCATTTC
GGCTCTTATACATGCTGCTACGATGG
Protein sequenceShow/hide protein sequence
NTFQKAFVTNRVGDFGLLLGILGLYWTTGSFEFRDLFKIFNNLIYNNEVQLLNPLNFLFMYGYLMLWRALPPFRLLYMLLRW