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MS017435 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017435
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPatatin
Genome locationscaffold435:47211..47366
RNA-Seq ExpressionMS017435
SyntenyMS017435
Gene Ontology termsGO:0006629 - lipid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0004620 - phospholipase activity (molecular function)
GO:0047372 - acylglycerol lipase activity (molecular function)
InterPro domainsIPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PHT24497.1 Patatin-like protein 2 [Capsicum baccatum]7.1e-0859.62Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
        ADYFDV+  TS   L+ AMLT+PDE+NRPLY A  +  F LE+C KIF QK+
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
PHT51064.1 Patatin-like protein 2 [Capsicum baccatum]7.1e-0859.62Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
        ADYFDV+  TS   L+ AMLT+PDE+NRPLY A  +  F LE+C KIF QK+
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
PHT51162.1 Patatin-like protein 3 [Capsicum baccatum]7.1e-0859.62Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
        ADYFDV+  TS   L+ AMLT+PDE+NRPLY A  +  F LE+C KIF QK+
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
XP_004238176.1 patatin-like protein 2 [Solanum lycopersicum]7.1e-0859.62Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
        ADYFDV+  TS   L+ AMLT+PDE+NRPLY A  +  F LE+C KIF QK+
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
XP_015167562.1 PREDICTED: patatin-like protein 2 [Solanum tuberosum]4.2e-0861.54Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
        ADYFDV+  TS  SL+ AMLT+PDE+NRPLY A  +  F LE+C KIF QK+
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
TrEMBL top hitse value%identityAlignment
A0A2G2UUT9 Patatin3.4e-0859.62Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
        ADYFDV+  TS   L+ AMLT+PDE+NRPLY A  +  F LE+C KIF QK+
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
A0A2G2UYL9 Patatin3.4e-0859.62Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
        ADYFDV+  TS   L+ AMLT+PDE+NRPLY A  +  F LE+C KIF QK+
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
A0A2G2X0Q0 Patatin3.4e-0859.62Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
        ADYFDV+  TS   L+ AMLT+PDE+NRPLY A  +  F LE+C KIF QK+
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
A0A7N0UDH6 Patatin4.1e-0961.54Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
        ADYFDV++ TS   L+ AMLT+PDEHNRPLY A  ++ F LE C KIF QK+
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
A0A7N0VHK0 Patatin6.9e-0959.62Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
        ADYFDV++ TS   L+ AMLT+PDEHNRPLY A  ++ F LE+C KIF Q +
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR
SwissProt top hitse value%identityAlignment
A2YW91 Patatin-like protein 26.0e-1060.78Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQK
        ADYFDVV  TS   LL AMLT+P+E+NRPL+ AD+L KF +E+   IF QK
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQK
O23179 Patatin-like protein 12.8e-0754Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
        ADYFDV+  TS   L+ AMLT PDE  RP + A  +  F LE+C KIF Q
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
O23180 Patatin-like protein 52.5e-0854Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
        ADYFDV+  TS   L+ AMLT+PDE+ RP + A ++  F LE+C KIF Q
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
O48723 Patatin-like protein 25.6e-0852Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
        ADYFDV+  TS   L+ AMLT+P++  RPL+ A +++ F LE C KIF Q
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
Q6ZJD3 Patatin-like protein 26.0e-1060.78Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQK
        ADYFDVV  TS   LL AMLT+P+E+NRPL+ AD+L KF +E+   IF QK
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQK
Arabidopsis top hitse value%identityAlignment
AT2G26560.1 phospholipase A 2A4.0e-0952Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
        ADYFDV+  TS   L+ AMLT+P++  RPL+ A +++ F LE C KIF Q
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
AT4G37060.1 PATATIN-like protein 51.8e-0954Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
        ADYFDV+  TS   L+ AMLT+PDE+ RP + A ++  F LE+C KIF Q
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
AT4G37060.2 PATATIN-like protein 51.8e-0954Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
        ADYFDV+  TS   L+ AMLT+PDE+ RP + A ++  F LE+C KIF Q
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
AT4G37070.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein2.0e-0854Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
        ADYFDV+  TS   L+ AMLT PDE  RP + A  +  F LE+C KIF Q
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
AT4G37070.3 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein2.0e-0854Show/hide
Query:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ
        ADYFDV+  TS   L+ AMLT PDE  RP + A  +  F LE+C KIF Q
Subjt:  ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCGACTACTTTGACGTAGTCACCGAAACTAGTATGGCCAGTCTATTGGCGGCTATGTTAACATCCCCCGATGAACATAACCGACCTTTGTACTTTGCCGACAAGTTACA
AAAGTTTAACTTAGAATATTGCCGAAAAATATTTGCTCAAAAAAGG
mRNA sequenceShow/hide mRNA sequence
GCCGACTACTTTGACGTAGTCACCGAAACTAGTATGGCCAGTCTATTGGCGGCTATGTTAACATCCCCCGATGAACATAACCGACCTTTGTACTTTGCCGACAAGTTACA
AAAGTTTAACTTAGAATATTGCCGAAAAATATTTGCTCAAAAAAGG
Protein sequenceShow/hide protein sequence
ADYFDVVTETSMASLLAAMLTSPDEHNRPLYFADKLQKFNLEYCRKIFAQKR