; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017454 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017454
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationscaffold435:534095..534302
RNA-Seq ExpressionMS017454
SyntenyMS017454
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054854.1 uncharacterized protein E6C27_scaffold406G00610 [Cucumis melo var. makuwa]7.1e-0844.12Show/hide
Query:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK
        LK+  +F  K+ L K+ Y +A+K +F+FKTVKSN   K +  KC  ++C+WY+R+SRY   ++W +RK
Subjt:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK

KAA0059897.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]9.3e-0844.12Show/hide
Query:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK
        LK+  +F  KE L K+ Y +A+K +F+FKTV+SN   K +  KC  ++C WY+R+SRY   ++W +RK
Subjt:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK

KAA0065296.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]2.4e-0845.59Show/hide
Query:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK
        LK++ +F  KE L K+ Y +A+K +F+FKTV+SN   K +  KC  ++C WY+R+SRY   K+W +RK
Subjt:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK

KAA0066702.1 uncharacterized protein E6C27_scaffold271G00350 [Cucumis melo var. makuwa]9.3e-0844.12Show/hide
Query:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK
        LK++ +F  KE L K+ Y +A+K +F+FKTV+SN K  +   KC  ++C WY+R+SRY   ++W +RK
Subjt:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK

TYK22454.1 uncharacterized protein E5676_scaffold3009G00020 [Cucumis melo var. makuwa]7.1e-0844.12Show/hide
Query:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK
        LK+  +F  K+ L K+ Y +A+K +F+FKTVKSN   K +  KC  ++C+WY+R+SRY   ++W +RK
Subjt:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK

TrEMBL top hitse value%identityAlignment
A0A5A7UI69 SWIM-type domain-containing protein3.4e-0844.12Show/hide
Query:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK
        LK+  +F  K+ L K+ Y +A+K +F+FKTVKSN   K +  KC  ++C+WY+R+SRY   ++W +RK
Subjt:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK

A0A5A7UZ18 Protein FAR1-RELATED SEQUENCE 4-like4.5e-0844.12Show/hide
Query:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK
        LK+  +F  KE L K+ Y +A+K +F+FKTV+SN   K +  KC  ++C WY+R+SRY   ++W +RK
Subjt:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK

A0A5A7VG38 Protein FAR1-RELATED SEQUENCE 4-like1.2e-0845.59Show/hide
Query:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK
        LK++ +F  KE L K+ Y +A+K +F+FKTV+SN   K +  KC  ++C WY+R+SRY   K+W +RK
Subjt:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK

A0A5A7VQ50 DBD_Tnp_Mut domain-containing protein4.5e-0844.12Show/hide
Query:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK
        LK+  +F  KE L K+ Y +A+K +F+FKTV+SN   K +  KC +++C WY+R+SRY   ++W +RK
Subjt:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK

A0A5D3DFS5 SWIM-type domain-containing protein3.4e-0844.12Show/hide
Query:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK
        LK+  +F  K+ L K+ Y +A+K +F+FKTVKSN   K +  KC  ++C+WY+R+SRY   ++W +RK
Subjt:  LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGAAAAAAGATTGTGTTTTTCTAAGGAAAGAAGAATTGAAGAAAGCAGTTTACTCTGTAGCCTTAAAGGGTAGTTTTCAGTTCAAAACAGTAAAATCCAACAAAAAAAA
AAAACAGTTGGTTTTAAAGTGTCTAGACGAATCATGCAATTGGTACCTCCGTTCTTCTCGTTACTTAGATAGCAAAATATGGGCTATTAGGAAA
mRNA sequenceShow/hide mRNA sequence
CTGAAAAAAGATTGTGTTTTTCTAAGGAAAGAAGAATTGAAGAAAGCAGTTTACTCTGTAGCCTTAAAGGGTAGTTTTCAGTTCAAAACAGTAAAATCCAACAAAAAAAA
AAAACAGTTGGTTTTAAAGTGTCTAGACGAATCATGCAATTGGTACCTCCGTTCTTCTCGTTACTTAGATAGCAAAATATGGGCTATTAGGAAA
Protein sequenceShow/hide protein sequence
LKKDCVFLRKEELKKAVYSVALKGSFQFKTVKSNKKKKQLVLKCLDESCNWYLRSSRYLDSKIWAIRK