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MS017456 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017456
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF1985 domain-containing protein
Genome locationscaffold435:536187..536441
RNA-Seq ExpressionMS017456
SyntenyMS017456
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]1.1e-1349.41Show/hide
Query:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL
        +INL  K + +E I   L ++    FR   FG FL+ S+   SS LLLHLIQR CKPK  S+L F IGG+V+ FG+++FA++TGL
Subjt:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL

XP_022132727.1 uncharacterized protein LOC111005524 [Momordica charantia]2.4e-1348.24Show/hide
Query:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL
        +INL  K   +  I   L E+  ++ R SCFG FLDF + K SS L  HLI+RQC  K  +EL F++ G+V  FGIKDFA++TG+
Subjt:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL

XP_031743197.1 uncharacterized protein LOC101221625 isoform X9 [Cucumis sativus]4.6e-1245.88Show/hide
Query:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL
        +INL  K   +  I   L E+  + F+ SCFG FLD  + K SS L  HLI+RQC  K  +EL F++ G++  FG+KDFA++TGL
Subjt:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL

XP_031743205.1 uncharacterized protein LOC101221625 isoform X17 [Cucumis sativus]4.6e-1245.88Show/hide
Query:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL
        +INL  K   +  I   L E+  + F+ SCFG FLD  + K SS L  HLI+RQC  K  +EL F++ G++  FG+KDFA++TGL
Subjt:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL

XP_031743208.1 uncharacterized protein LOC101221625 isoform X20 [Cucumis sativus]4.6e-1245.88Show/hide
Query:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL
        +INL  K   +  I   L E+  + F+ SCFG FLD  + K SS L  HLI+RQC  K  +EL F++ G++  FG+KDFA++TGL
Subjt:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL

TrEMBL top hitse value%identityAlignment
A0A0A0KI50 TF-B3 domain-containing protein2.2e-1245.88Show/hide
Query:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL
        +INL  K   +  I   L E+  + F+ SCFG FLD  + K SS L  HLI+RQC  K  +EL F++ G++  FG+KDFA++TGL
Subjt:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL

A0A1S3B0L9 uncharacterized protein LOC103484737 isoform X54.9e-1245.88Show/hide
Query:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL
        +INL  K   +  I   L E+  + F+ SCFG FLD  + K SS L  HLI+RQC  K   EL F++ G++  FG+KDFA++TGL
Subjt:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL

A0A5A7U047 Protein Ycf2-like5.2e-1449.41Show/hide
Query:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL
        +INL  K + +E I   L ++    FR   FG FL+ S+   SS LLLHLIQR CKPK  S+L F IGG+V+ FG+++FA++TGL
Subjt:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL

A0A5D3CNI7 TF-B3 domain-containing protein4.9e-1245.88Show/hide
Query:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL
        +INL  K   +  I   L E+  + F+ SCFG FLD  + K SS L  HLI+RQC  K   EL F++ G++  FG+KDFA++TGL
Subjt:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL

A0A6J1BX50 uncharacterized protein LOC1110055241.2e-1348.24Show/hide
Query:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL
        +INL  K   +  I   L E+  ++ R SCFG FLDF + K SS L  HLI+RQC  K  +EL F++ G+V  FGIKDFA++TG+
Subjt:  QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31150.1 Domain of unknown function (DUF1985)2.0e-0535.23Show/hide
Query:  QINLCCKRSTMETIWTRLE-EKNCEIFRNSCFGQFLDFSMGKTS-SHLLLH-LIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL
        ++N+  +   + TI   L+  +  E  ++S FG+  +F + + S S  L+H L+ RQ   KK  EL F  GG  + F I++F IVTGL
Subjt:  QINLCCKRSTMETIWTRLE-EKNCEIFRNSCFGQFLDFSMGKTS-SHLLLH-LIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGATTAATCTTTGTTGTAAACGTTCTACCATGGAGACCATTTGGACAAGATTAGAAGAAAAAAATTGTGAAATATTTAGAAACAGTTGCTTTGGCCAATTCTTAGACTT
TTCGATGGGAAAAACATCATCACATCTTCTCCTACATCTAATACAACGACAGTGCAAACCAAAAAAGGCTTCTGAATTGAATTTTAGTATTGGTGGAAAGGTGGTAACAT
TTGGGATTAAGGATTTCGCAATAGTTACTGGCCTA
mRNA sequenceShow/hide mRNA sequence
CAGATTAATCTTTGTTGTAAACGTTCTACCATGGAGACCATTTGGACAAGATTAGAAGAAAAAAATTGTGAAATATTTAGAAACAGTTGCTTTGGCCAATTCTTAGACTT
TTCGATGGGAAAAACATCATCACATCTTCTCCTACATCTAATACAACGACAGTGCAAACCAAAAAAGGCTTCTGAATTGAATTTTAGTATTGGTGGAAAGGTGGTAACAT
TTGGGATTAAGGATTTCGCAATAGTTACTGGCCTA
Protein sequenceShow/hide protein sequence
QINLCCKRSTMETIWTRLEEKNCEIFRNSCFGQFLDFSMGKTSSHLLLHLIQRQCKPKKASELNFSIGGKVVTFGIKDFAIVTGL