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MS017458 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017458
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMuDRA-like transposase
Genome locationscaffold435:595016..595261
RNA-Seq ExpressionMS017458
SyntenyMS017458
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148135.1 uncharacterized protein LOC111016888 [Momordica charantia]2.1e-3082.93Show/hide
Query:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK
        NDEKLQ +VQSSGTNDV EG+VFD KKELSL+MHLVAMR NFQFKVKKSTPELYILRCV   CTWRLRATKL++C +FKIKK
Subjt:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK

XP_022151512.1 protein FAR1-RELATED SEQUENCE 4-like [Momordica charantia]1.7e-2773.75Show/hide
Query:  EKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK
        ++LQ +VQS+GTNDV EGDVFD+KKEL +KMHL+A+RKNFQF+VKKSTPELY+LRC+   CTWRLRATK+++C LFKIKK
Subjt:  EKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK

XP_022153146.1 uncharacterized protein LOC111020715 [Momordica charantia]1.2e-2881.71Show/hide
Query:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK
        N E LQLIVQSSGTNDV EG+VFD KKELSL+MHLV MR NFQFKVKKSTPELYIL CV   CTWRLRATKL++C LFKIKK
Subjt:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK

XP_022155970.1 uncharacterized protein LOC111022954 [Momordica charantia]6.7e-2982.93Show/hide
Query:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK
        NDEKLQLIVQSSGTNDV EG VFD KKELSL+ HLVAM  NFQFKVKKSTPELYILRCV + CTWRLRA KL +C LFKIKK
Subjt:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK

XP_022157017.1 uncharacterized protein LOC111023843 [Momordica charantia]1.0e-3798.78Show/hide
Query:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK
        NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTP+LYILRCVHADCTWRLRATKLKECTLFKIKK
Subjt:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK

TrEMBL top hitse value%identityAlignment
A0A6J1D234 uncharacterized protein LOC1110168881.0e-3082.93Show/hide
Query:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK
        NDEKLQ +VQSSGTNDV EG+VFD KKELSL+MHLVAMR NFQFKVKKSTPELYILRCV   CTWRLRATKL++C +FKIKK
Subjt:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK

A0A6J1DDQ3 protein FAR1-RELATED SEQUENCE 4-like8.0e-2873.75Show/hide
Query:  EKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK
        ++LQ +VQS+GTNDV EGDVFD+KKEL +KMHL+A+RKNFQF+VKKSTPELY+LRC+   CTWRLRATK+++C LFKIKK
Subjt:  EKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK

A0A6J1DJT1 uncharacterized protein LOC1110207155.6e-2981.71Show/hide
Query:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK
        N E LQLIVQSSGTNDV EG+VFD KKELSL+MHLV MR NFQFKVKKSTPELYIL CV   CTWRLRATKL++C LFKIKK
Subjt:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK

A0A6J1DP00 uncharacterized protein LOC1110229543.3e-2982.93Show/hide
Query:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK
        NDEKLQLIVQSSGTNDV EG VFD KKELSL+ HLVAM  NFQFKVKKSTPELYILRCV + CTWRLRA KL +C LFKIKK
Subjt:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK

A0A6J1DTG5 uncharacterized protein LOC1110238435.0e-3898.78Show/hide
Query:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK
        NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTP+LYILRCVHADCTWRLRATKLKECTLFKIKK
Subjt:  NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATGATGAGAAATTGCAACTCATAGTACAGTCTTCTGGGACAAATGATGTTAATGAGGGCGATGTATTTGATAATAAGAAGGAGTTGAGTTTGAAAATGCATTTAGTTGC
AATGCGGAAGAATTTTCAGTTTAAAGTAAAGAAGTCGACGCCGGAGCTATATATACTGCGGTGCGTTCATGCTGATTGCACGTGGAGACTTCGAGCTACCAAGCTAAAGG
AATGCACTTTGTTCAAGATAAAAAAA
mRNA sequenceShow/hide mRNA sequence
AATGATGAGAAATTGCAACTCATAGTACAGTCTTCTGGGACAAATGATGTTAATGAGGGCGATGTATTTGATAATAAGAAGGAGTTGAGTTTGAAAATGCATTTAGTTGC
AATGCGGAAGAATTTTCAGTTTAAAGTAAAGAAGTCGACGCCGGAGCTATATATACTGCGGTGCGTTCATGCTGATTGCACGTGGAGACTTCGAGCTACCAAGCTAAAGG
AATGCACTTTGTTCAAGATAAAAAAA
Protein sequenceShow/hide protein sequence
NDEKLQLIVQSSGTNDVNEGDVFDNKKELSLKMHLVAMRKNFQFKVKKSTPELYILRCVHADCTWRLRATKLKECTLFKIKK