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MS017500 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017500
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold373:69727..70101
RNA-Seq ExpressionMS017500
SyntenyMS017500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038574.1 uncharacterized protein E6C27_scaffold92G001040 [Cucumis melo var. makuwa]2.4e-2564.29Show/hide
Query:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV
        MNCLTCQALPRTQSDRENN    + YET SS  RGKSCCL+V RRWSAELTP  +  IK   D          S SD   K R  R+ S +   NEPRLV
Subjt:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV

Query:  RSSGMRRDWSFEDLRLRD-QKKGRFH
        RSSGMRRDWSFEDL LRD QKKGRFH
Subjt:  RSSGMRRDWSFEDLRLRD-QKKGRFH

KGN60385.1 hypothetical protein Csa_002007 [Cucumis sativus]5.3e-2561.11Show/hide
Query:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAEL-TPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRL
        MNCLTCQALPRTQSDREN       YET S+  RGKSCCL+V RRWS EL TP+SY+ IK   D+         S   KK + R +RS+      NEP+L
Subjt:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAEL-TPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRL

Query:  VRSSGMRRDWSFEDLRLRDQKKGRFH
        VRSSGMRRDWSFEDL LR QKKGRFH
Subjt:  VRSSGMRRDWSFEDLRLRDQKKGRFH

XP_008465978.2 PREDICTED: uncharacterized protein LOC103503546 [Cucumis melo]2.4e-2564.29Show/hide
Query:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV
        MNCLTCQALPRTQSDRENN    + YET SS  RGKSCCL+V RRWSAELTP  +  IK   D          S SD   K R  R+ S +   NEPRLV
Subjt:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV

Query:  RSSGMRRDWSFEDLRLRD-QKKGRFH
        RSSGMRRDWSFEDL LRD QKKGRFH
Subjt:  RSSGMRRDWSFEDLRLRD-QKKGRFH

XP_022159728.1 uncharacterized protein LOC111026067 [Momordica charantia]3.2e-6298.4Show/hide
Query:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV
        MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSY HIKTTADNAREGCSSRKSFSDKKVKDRYLRS SMNEKENEPRLV
Subjt:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV

Query:  RSSGMRRDWSFEDLRLRDQKKGRFH
        RSSGMRRDWSFEDLRLRDQKKGRFH
Subjt:  RSSGMRRDWSFEDLRLRDQKKGRFH

XP_038887010.1 uncharacterized protein LOC120077178 [Benincasa hispida]2.1e-2966.4Show/hide
Query:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV
        MNCLTCQALPRTQSDREN     + YETSSS  RGKSCCL+V+RRWSAELTP SYE IK   D +        S   KK K+R + SD      NEPRLV
Subjt:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV

Query:  RSSGMRRDWSFEDLRLRDQKKGRFH
        RSSGMRRDWSFEDL LRDQKK RFH
Subjt:  RSSGMRRDWSFEDLRLRDQKKGRFH

TrEMBL top hitse value%identityAlignment
A0A0A0LEC0 Uncharacterized protein2.6e-2561.11Show/hide
Query:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAEL-TPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRL
        MNCLTCQALPRTQSDREN       YET S+  RGKSCCL+V RRWS EL TP+SY+ IK   D+         S   KK + R +RS+      NEP+L
Subjt:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAEL-TPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRL

Query:  VRSSGMRRDWSFEDLRLRDQKKGRFH
        VRSSGMRRDWSFEDL LR QKKGRFH
Subjt:  VRSSGMRRDWSFEDLRLRDQKKGRFH

A0A1S3CRL3 uncharacterized protein LOC1035035461.1e-2564.29Show/hide
Query:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV
        MNCLTCQALPRTQSDRENN    + YET SS  RGKSCCL+V RRWSAELTP  +  IK   D          S SD   K R  R+ S +   NEPRLV
Subjt:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV

Query:  RSSGMRRDWSFEDLRLRD-QKKGRFH
        RSSGMRRDWSFEDL LRD QKKGRFH
Subjt:  RSSGMRRDWSFEDLRLRD-QKKGRFH

A0A5A7T546 Uncharacterized protein1.1e-2564.29Show/hide
Query:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV
        MNCLTCQALPRTQSDRENN    + YET SS  RGKSCCL+V RRWSAELTP  +  IK   D          S SD   K R  R+ S +   NEPRLV
Subjt:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV

Query:  RSSGMRRDWSFEDLRLRD-QKKGRFH
        RSSGMRRDWSFEDL LRD QKKGRFH
Subjt:  RSSGMRRDWSFEDLRLRD-QKKGRFH

A0A5D3E5T4 Uncharacterized protein1.1e-2564.29Show/hide
Query:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV
        MNCLTCQALPRTQSDRENN    + YET SS  RGKSCCL+V RRWSAELTP  +  IK   D          S SD   K R  R+ S +   NEPRLV
Subjt:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV

Query:  RSSGMRRDWSFEDLRLRD-QKKGRFH
        RSSGMRRDWSFEDL LRD QKKGRFH
Subjt:  RSSGMRRDWSFEDLRLRD-QKKGRFH

A0A6J1DZN2 uncharacterized protein LOC1110260671.5e-6298.4Show/hide
Query:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV
        MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSY HIKTTADNAREGCSSRKSFSDKKVKDRYLRS SMNEKENEPRLV
Subjt:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLV

Query:  RSSGMRRDWSFEDLRLRDQKKGRFH
        RSSGMRRDWSFEDLRLRDQKKGRFH
Subjt:  RSSGMRRDWSFEDLRLRDQKKGRFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35215.1 unknown protein9.3e-0480.95Show/hide
Query:  NEPRLVRSSGMRRDWSFEDLR
        +EP+LVRSSG+RRDWSFEDL+
Subjt:  NEPRLVRSSGMRRDWSFEDLR

AT5G46770.1 unknown protein6.7e-1033.9Show/hide
Query:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVT--RRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDS-MNEKENEP
        +NCL+CQALPRT S+++ + +         +   GK+CC++    R WS  L+P  YE I     +        K     ++      S S +  +  +P
Subjt:  MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVT--RRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDS-MNEKENEP

Query:  RLVRSSGMRRDWSFEDLR
        +LVRS+G+RR+WSFE+LR
Subjt:  RLVRSSGMRRDWSFEDLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGCCTAACATGCCAAGCCCTTCCAAGGACTCAGTCAGACAGGGAGAACAATAATAACAATTATTATGCCTATGAGACCTCTTCTAGTAGAGGTAGAGGTAAATC
ATGTTGCCTACACGTCACGCGGCGGTGGTCGGCCGAGCTGACTCCGACGTCGTACGAGCACATCAAAACCACCGCTGATAATGCTAGGGAAGGCTGCTCTTCGCGCAAGA
GTTTTTCGGACAAGAAGGTGAAGGATCGCTATCTCCGCAGCGACAGCATGAACGAGAAGGAGAACGAGCCGAGGTTGGTGAGGAGCTCCGGGATGAGGAGGGATTGGAGC
TTTGAGGATTTGAGATTGAGAGATCAGAAGAAAGGGAGATTCCAT
mRNA sequenceShow/hide mRNA sequence
ATGAATTGCCTAACATGCCAAGCCCTTCCAAGGACTCAGTCAGACAGGGAGAACAATAATAACAATTATTATGCCTATGAGACCTCTTCTAGTAGAGGTAGAGGTAAATC
ATGTTGCCTACACGTCACGCGGCGGTGGTCGGCCGAGCTGACTCCGACGTCGTACGAGCACATCAAAACCACCGCTGATAATGCTAGGGAAGGCTGCTCTTCGCGCAAGA
GTTTTTCGGACAAGAAGGTGAAGGATCGCTATCTCCGCAGCGACAGCATGAACGAGAAGGAGAACGAGCCGAGGTTGGTGAGGAGCTCCGGGATGAGGAGGGATTGGAGC
TTTGAGGATTTGAGATTGAGAGATCAGAAGAAAGGGAGATTCCAT
Protein sequenceShow/hide protein sequence
MNCLTCQALPRTQSDRENNNNNYYAYETSSSRGRGKSCCLHVTRRWSAELTPTSYEHIKTTADNAREGCSSRKSFSDKKVKDRYLRSDSMNEKENEPRLVRSSGMRRDWS
FEDLRLRDQKKGRFH