CuGenDBv2

Gene ID	MS017509
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein TonB like
Genome location	scaffold373:151006..152822
RNA-Seq Expression	MS017509
Synteny	MS017509
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021013 - ATPase, vacuolar ER assembly factor, Vma12

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022131249.1 uncharacterized protein LOC111004507 [Momordica charantia]

1.0e-102

99.02

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Query:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        MTNDRTHPSGLVIS TEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
Subjt:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSSRSK
        DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS SK
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSSRSK

Query:  IKKSQ
        IKKSQ
Subjt:  IKKSQ

XP_022959366.1 uncharacterized protein LOC111460360 [Cucurbita moschata]

1.2e-87

84.95

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Query:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND+ HPSGLVI++TEAIRSFL SAS D R+SE+LRQ++S+L+SQDNVPYKPLRAIW A+ESSTRPDLL LL GSEFVFTSPKPREKSEELKARLKKL 
Subjt:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS
        D+AERKAYQELVKDIAP+K IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFR DP+MS AGGILGLVFGMLVETLLFIIR+S+YD+R SSSSRS
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS

Query:  KIKKSQ
        K+KK+Q
Subjt:  KIKKSQ

XP_023006665.1 uncharacterized protein LOC111499322 [Cucurbita maxima]

3.0e-86

83.5

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Query:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND+ HPSGLVI++TEAIR+FL SAS D R+SE+LRQ++S+L+SQDNVPYKPLRAIW A+ESSTRPDLL LL GSEFVFTSPKPREKSEELKARLK L 
Subjt:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS
        D+AERKAYQELVKDIAP+K IDEPFSSYKDQLGFGLHVVLIMFTGYLVGY LFRALFR DP+MS AGGILGLVFGMLVETLLFIIR+S+YD+R SSSSRS
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS

Query:  KIKKSQ
        K+KK+Q
Subjt:  KIKKSQ

XP_023548168.1 uncharacterized protein LOC111806888 [Cucurbita pepo subsp. pepo]

1.6e-87

84.47

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Query:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND+ HPSGLVI++TEAIRSFL SAS D R+SE+LRQ++S+L+SQDNVPYKPLRAIW A+ESSTRPDLL LL GSEFVFTSPKPREKSEELKARLKKL 
Subjt:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS
        D+AERKAYQELVKDIAP+K +DEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFR DP+MS AGGILGLVFGMLVETLLFIIR+S+YD+R SSSSRS
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS

Query:  KIKKSQ
        K+KK+Q
Subjt:  KIKKSQ

XP_038876067.1 uncharacterized protein LOC120068388 [Benincasa hispida]

9.4e-88

85.44

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Query:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND THPSGLV+SNTEAIRSFL SAS D +LS++LRQI+SDL+SQ N+PYKPLRAIW A ESS RPDLL LLAGSEFV TSPKPREKSEELKARLKKL 
Subjt:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS
        D+AERKAYQELVKDIAP+K I+EPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFR DP+MS AGGILGLVFGMLVETLLFIIRSSNYD+R SSSS S
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS

Query:  KIKKSQ
        K+KKSQ
Subjt:  KIKKSQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7F5 Uncharacterized protein

2.5e-86

85.44

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Query:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND   PSGLV+S+TEAIRSFL SAS D +LS++LRQI+SDL SQ N+PYK LRAIW A+ESSTRPDLL LLAGSEFVFTSPKPREKSEELKARLKKL 
Subjt:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS
        D+AERKAYQELVKDIAP+K IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFR DP+MS AGGILGLVFGMLVETLLFIIRSSNYD+R SSSSRS
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS

Query:  KIKKSQ
        K+KKSQ
Subjt:  KIKKSQ

A0A1S3C6X8 uncharacterized protein LOC103497719

4.3e-86

84.95

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Query:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND   PSGLV+S+TEAIRSFL SAS D +LS++LRQI+SDL+SQ N+PYK LRAIW A+ESSTRPDLL LLAGSEFVFTSPKPREKSEELKARLKKL 
Subjt:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS
        D+AERKAYQELVKDIAP+K IDEPFSSYKDQLGFGLHVVLIMFTGYL+GYALFRALFR DP+MS AGGILGLVFGMLVETLLFIIRSSNYD+R SSSSRS
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS

Query:  KIKKSQ
        K+KKSQ
Subjt:  KIKKSQ

A0A6J1BP66 uncharacterized protein LOC111004507

5.0e-103

99.02

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Query:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        MTNDRTHPSGLVIS TEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
Subjt:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSSRSK
        DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSS SK
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSSRSK

Query:  IKKSQ
        IKKSQ
Subjt:  IKKSQ

A0A6J1H4N6 uncharacterized protein LOC111460360

5.9e-88

84.95

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Query:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND+ HPSGLVI++TEAIRSFL SAS D R+SE+LRQ++S+L+SQDNVPYKPLRAIW A+ESSTRPDLL LL GSEFVFTSPKPREKSEELKARLKKL 
Subjt:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS
        D+AERKAYQELVKDIAP+K IDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFR DP+MS AGGILGLVFGMLVETLLFIIR+S+YD+R SSSSRS
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS

Query:  KIKKSQ
        K+KK+Q
Subjt:  KIKKSQ

A0A6J1L0S3 uncharacterized protein LOC111499322

1.5e-86

83.5

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Query:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE
        M ND+ HPSGLVI++TEAIR+FL SAS D R+SE+LRQ++S+L+SQDNVPYKPLRAIW A+ESSTRPDLL LL GSEFVFTSPKPREKSEELKARLK L 
Subjt:  MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLE

Query:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS
        D+AERKAYQELVKDIAP+K IDEPFSSYKDQLGFGLHVVLIMFTGYLVGY LFRALFR DP+MS AGGILGLVFGMLVETLLFIIR+S+YD+R SSSSRS
Subjt:  DIAERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDR-SSSSRS

Query:  KIKKSQ
        K+KK+Q
Subjt:  KIKKSQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G52980.1 CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

2.6e-67

68.16

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Query:  DRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLEDIA
        D  + SGL++S TE +RSFL  AS D RLS++LR I+SDL S++ +PYK LRAIW  S+ STRPDLL L +GS FVFTSPKPREKSEELK RL KL +IA
Subjt:  DRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLEDIA

Query:  ERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSSRSKIKK
        ERK Y ELVKDI P+K ++EPFSSYKDQLGFGLHV L MFTGYLVGYA FRALF R+P +S AGGILGLV  MLVETLLFII++S  DD+  SS+S  + 
Subjt:  ERKAYQELVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSSRSKIKK

Query:  S
        S
Subjt:  S

Sequences

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CDS sequence

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ATGACCAACGACCGGACACATCCGTCTGGTCTCGTGATATCTAACACCGAAGCGATTCGCTCATTTCTGAACTCGGCGTCCAAAGATTTGCGACTTTCTGAGCAACTCCG
GCAGATTTCTTCCGATCTCTCTTCGCAAGATAACGTTCCATATAAGCCGTTAAGAGCTATCTGGGTTGCTTCGGAATCCTCCACCCGGCCGGACTTACTCTGTCTTTTAG
CCGGATCGGAGTTCGTCTTTACAAGCCCCAAACCGAGGGAGAAGAGCGAGGAGTTAAAGGCTAGACTGAAGAAGCTTGAGGATATAGCAGAGAGGAAGGCCTATCAGGAG
CTGGTGAAGGATATCGCACCTAGGAAAACAATTGATGAGCCTTTCTCTTCATACAAGGATCAGTTGGGATTCGGTTTACATGTTGTGTTGATAATGTTTACTGGATACCT
GGTCGGCTATGCTTTGTTCCGAGCATTGTTTAGACGCGATCCAGTCATGAGTGTTGCTGGAGGTATCCTTGGATTGGTTTTTGGCATGCTCGTAGAAACACTTCTTTTCA
TTATTAGATCGTCCAATTATGATGACCGGTCTTCATCTTCCCGTTCCAAGATAAAGAAGAGTCAA

mRNA sequence

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Protein sequence

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MTNDRTHPSGLVISNTEAIRSFLNSASKDLRLSEQLRQISSDLSSQDNVPYKPLRAIWVASESSTRPDLLCLLAGSEFVFTSPKPREKSEELKARLKKLEDIAERKAYQE
LVKDIAPRKTIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRRDPVMSVAGGILGLVFGMLVETLLFIIRSSNYDDRSSSSRSKIKKSQ

MS017509 (gene) of Bitter gourd (TR) v1 genome