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MS017512 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017512
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpolygalacturonase 1 beta-like protein 3
Genome locationscaffold373:160793..160927
RNA-Seq ExpressionMS017512
SyntenyMS017512
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142981.1 polygalacturonase 1 beta-like protein 3 [Cucumis sativus]4.1e-0464.44Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
        NG IESF +Y +Q NVG   DDSF SYSK  NS K NF +YGKSF
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
XP_008444317.1 PREDICTED: polygalacturonase 1 beta-like protein 3 [Cucumis melo]4.1e-0464.44Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
        NG IESF +Y +Q NVG   DDSF SYSK  NS K NF +YGKSF
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
XP_015882579.1 polygalacturonase 1 beta-like protein 3 [Ziziphus jujuba]7.0e-0462.22Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
        N GI+SF NY N  NVG   DDSFHSY++  NS K +F NYGKSF
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
XP_023910994.1 polygalacturonase 1 beta-like protein 3 [Quercus suber]1.4e-0464.44Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
        NG IE+F NY +++NVG   DDSF SYSK  NS K NF NYGKSF
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
XP_030961147.1 polygalacturonase 1 beta-like protein 3 [Quercus lobata]5.4e-0462.22Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
        NG IE+F NY +++NVG   DDSF SYSK  NS + NF NYGKSF
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
TrEMBL top hitse value%identityAlignment
A0A0A0LK44 BURP domain-containing protein2.0e-0464.44Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
        NG IESF +Y +Q NVG   DDSF SYSK  NS K NF +YGKSF
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
A0A1S3B9L4 polygalacturonase 1 beta-like protein 32.0e-0464.44Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
        NG IESF +Y +Q NVG   DDSF SYSK  NS K NF +YGKSF
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
A0A5A7V5U8 Polygalacturonase 1 beta-like protein 32.0e-0464.44Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
        NG IESF +Y +Q NVG   DDSF SYSK  NS K NF +YGKSF
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
A0A6P3ZPF5 polygalacturonase 1 beta-like protein 33.4e-0462.22Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
        N GI+SF NY N  NVG   DDSFHSY++  NS K +F NYGKSF
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
A0A7N2R1U0 BURP domain-containing protein2.6e-0462.22Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
        NG IE+F NY +++NVG   DDSF SYSK  NS + NF NYGKSF
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
SwissProt top hitse value%identityAlignment
P92990 Polygalacturonase 1 beta-like protein 35.1e-0553.33Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
        N  +++F NY ++ NVG   DDSF SY+K  NS K NF NYG+SF
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
P93217 Polygalacturonase non-catalytic subunit AroGP27.3e-0451.11Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
        NG  E+F NY +++NVG   DD F +Y K  N+ +ANF NYG+SF
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
Arabidopsis top hitse value%identityAlignment
AT1G23760.1 BURP domain-containing protein8.9e-0550Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKS
        N  +++F+NY +  NVG   DDSF SY+K  N  K +F NYGKS
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKS
AT1G70370.1 polygalacturonase 23.6e-0653.33Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
        N  +++F NY ++ NVG   DDSF SY+K  NS K NF NYG+SF
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
AT1G70370.2 polygalacturonase 23.6e-0653.33Show/hide
Query:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF
        N  +++F NY ++ NVG   DDSF SY+K  NS K NF NYG+SF
Subjt:  NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATGGAGGTATTGAAAGCTTCGTAAATTACATAAACCAGACCAATGTGGGGGAAGGGGATGACGATTCATTCCACTCCTACTCGAAGAAGAAGAATTCGATCAAAGCCAA
TTTCCCAAATTACGGGAAATCCTTC
mRNA sequenceShow/hide mRNA sequence
AATGGAGGTATTGAAAGCTTCGTAAATTACATAAACCAGACCAATGTGGGGGAAGGGGATGACGATTCATTCCACTCCTACTCGAAGAAGAAGAATTCGATCAAAGCCAA
TTTCCCAAATTACGGGAAATCCTTC
Protein sequenceShow/hide protein sequence
NGGIESFVNYINQTNVGEGDDDSFHSYSKKKNSIKANFPNYGKSF