CuGenDBv2

Gene ID	MS017519
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	GTPase
Genome location	scaffold373:244408..248128
RNA-Seq Expression	MS017519
Synteny	MS017519
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6606267.1 hypothetical protein SDJN03_03584, partial [Cucurbita argyrosperma subsp. sororia]

6.4e-78

77.16

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Query:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK
        MVLWEITLATAYFLGLKRT+KLA+KIQRRLVSPKHPRIRQFLRGRTR++FDV VKVHQ +QH++IEVG N G+ I + LN+MKPS EI E   G +  MK
Subjt:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK

Query:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPA--GTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS
        M+KQ S+SYLKHR SPRAVISQKFDQYMSITSS+ RWPKPFPT AMIMRQ KPA  GT IQYRQY+ICGSEA+K NYR G F+ VIREDIMQWMLR+
Subjt:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPA--GTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS

XP_022159442.1 uncharacterized protein LOC111025863 isoform X1 [Momordica charantia]

1.8e-104

97.95

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Query:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK
        MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRS+FDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK
Subjt:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK

Query:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPAGTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS
        MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQ KPAGTKIQYRQYSICGSEAM+TNYRRGSFDCVIREDI+QWMLRS
Subjt:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPAGTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS

XP_022159444.1 uncharacterized protein LOC111025863 isoform X2 [Momordica charantia]

1.1e-80

82.56

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Query:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK
        MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRS+FDVAVKVHQNVQHQDIEV                              GMK
Subjt:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK

Query:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPAGTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS
        MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQ KPAGTKIQYRQYSICGSEAM+TNYRRGSFDCVIREDI+QWMLRS
Subjt:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPAGTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS

XP_022995481.1 uncharacterized protein LOC111491005 [Cucurbita maxima]

4.4e-79

78.28

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Query:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK
        MVLWEITLATAYFLGLKRT+KLA+KIQRRLVSPKHPRIRQFLRGRTR++FDV VKVHQ +QH++IEVGKN G+ I + LN+MK SAEI E   G +  MK
Subjt:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK

Query:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPA--GTKIQYRQYSICGSEAMKT-NYRRGSFDCVIREDIMQWMLRS
        M+KQ S+SYLKHR SPRAVISQKFDQYMSITSS+ RWPKPFPT AMIMRQ KPA  GT IQYRQY+ICGSEAM T NYRRG F+ VIREDIMQWMLR+
Subjt:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPA--GTKIQYRQYSICGSEAMKT-NYRRGSFDCVIREDIMQWMLRS

XP_023533976.1 uncharacterized protein LOC111795664 [Cucurbita pepo subsp. pepo]

1.4e-77

77.16

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Query:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK
        MVLWEITLATAYFLGLKRT+K+A+KIQRRLVSPKHPRIRQFLRGRTR++FDV VKVHQ +QH++IEVG N G+ I + LN+MK SAEI E   G +  MK
Subjt:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK

Query:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPA--GTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS
        M+KQ S+SYLKHR SPRAVISQKFDQYMSITSS+ RWPKPFPT AMIMRQ KPA  GT IQYRQY+ICGSEAMK NYR G F+ VIREDIMQWMLR+
Subjt:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPA--GTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DZV3 uncharacterized protein LOC111025863 isoform X1

8.7e-105

97.95

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Query:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK
        MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRS+FDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK
Subjt:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK

Query:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPAGTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS
        MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQ KPAGTKIQYRQYSICGSEAM+TNYRRGSFDCVIREDI+QWMLRS
Subjt:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPAGTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS

A0A6J1E2E5 uncharacterized protein LOC111025863 isoform X2

5.1e-81

82.56

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Query:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK
        MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRS+FDVAVKVHQNVQHQDIEV                              GMK
Subjt:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK

Query:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPAGTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS
        MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQ KPAGTKIQYRQYSICGSEAM+TNYRRGSFDCVIREDI+QWMLRS
Subjt:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPAGTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS

A0A6J1ET19 uncharacterized protein LOC111437317

6.5e-76

76.14

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Query:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK
        MVLWEITLATAYFLGLKRT+KLA+KIQRRLVSPKHPRIRQFLRGRTR++FDV VKVHQ +QH++ EVG N G+ I + LN+MK SAEI E   G +  MK
Subjt:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK

Query:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPA--GTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS
        M+KQ S+SYLKHR SPRAVISQKFDQYMSITSS+ RWPKPFPT AMIMRQ KPA  GT IQYRQY ICGSEAMK NY  G F+ VIREDIM+WMLR+
Subjt:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPA--GTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS

A0A6J1HU73 uncharacterized protein LOC111466890

1.3e-71

69.07

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Query:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK
        MVLWEI LATAYFLGLKRT+KL LK QRRLVSP HPRIR+FL  RTR++FDV +K H+ +QH+DI+VG +  + I QWLN+MKPSA I +H  G  TGMK
Subjt:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK

Query:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPAGTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLR
        MIKQVSNSY+KHRAS RA I QK D+Y+S TSS+ RWPK FPT AMI RQ+KPAGT  Q+RQ+SIC SE MKTNYRRG F+  IR+DI QWM+R
Subjt:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPAGTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLR

A0A6J1K213 uncharacterized protein LOC111491005

2.2e-79

78.28

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Query:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK
        MVLWEITLATAYFLGLKRT+KLA+KIQRRLVSPKHPRIRQFLRGRTR++FDV VKVHQ +QH++IEVGKN G+ I + LN+MK SAEI E   G +  MK
Subjt:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK

Query:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPA--GTKIQYRQYSICGSEAMKT-NYRRGSFDCVIREDIMQWMLRS
        M+KQ S+SYLKHR SPRAVISQKFDQYMSITSS+ RWPKPFPT AMIMRQ KPA  GT IQYRQY+ICGSEAM T NYRRG F+ VIREDIMQWMLR+
Subjt:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPA--GTKIQYRQYSICGSEAMKT-NYRRGSFDCVIREDIMQWMLRS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32260.1 unknown protein

8.4e-44

Show/hide

Query:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIR---EHQDGAIT
        MV WEITL TAYFLGL+RTY+LALKIQRRLV+PKHP+IRQFL  RTR +FDVA+ VH+N+Q +DIEVG+N GN IL+WL++MKP+A+IR   E    + +
Subjt:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIR---EHQDGAIT

Query:  GMKMIKQVS--NSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPAGTKIQYRQY---SICGSEAMKTNYRRGSFDCVIREDIMQWM
         M   K+++  +    H  + +   +++ D+++  TS      KPFP+ +M+++  +P GT  QYR Y    +  S    +    G F+ V+R+DI+QWM
Subjt:  GMKMIKQVS--NSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPAGTKIQYRQY---SICGSEAMKTNYRRGSFDCVIREDIMQWM

AT2G35480.1 unknown protein

1.8e-41

43.59

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Query:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK
        MVLWE+ L TAYFLG++RTY+LALK QRRLVSPKHPRIR F+  RT  +FD+A++VH+N+Q +D+ +G+N GN IL+ L++MKPSA++   ++   +  K
Subjt:  MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMK

Query:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIM-RQQKPAGTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLR
          + + ++ LK   + +   +++ D+  ++  S+R +   +P  +M+M +  +  GT  QYR YS+  S  +K  Y RG F+ VIR+DI+QWM++
Subjt:  MIKQVSNSYLKHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIM-RQQKPAGTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTGTTATGGGAGATCACATTGGCAACGGCGTATTTCTTGGGGCTGAAGCGAACATATAAACTCGCTCTGAAGATTCAGCGGCGTCTTGTTTCTCCAAAGCACCCTCG
GATTCGCCAATTTCTTCGCGGGCGTACACGTTCCGTATTTGATGTTGCTGTAAAAGTTCACCAGAATGTTCAGCATCAAGACATAGAAGTTGGTAAGAATTTTGGTAACC
GAATTTTGCAATGGCTTAACCAAATGAAACCATCTGCAGAGATTCGTGAACATCAGGATGGTGCTATCACAGGCATGAAAATGATAAAGCAGGTTTCCAACTCCTACTTG
AAACATCGGGCCAGCCCTCGAGCGGTGATTAGTCAGAAATTCGATCAATATATGTCTATTACCTCATCGATACGCAGATGGCCTAAGCCCTTCCCCACCTTTGCAATGAT
CATGAGGCAGCAAAAGCCTGCTGGGACCAAGATCCAATACAGGCAATACAGCATTTGTGGCTCTGAAGCAATGAAAACGAATTACAGAAGAGGAAGTTTCGATTGCGTTA
TTCGGGAAGATATCATGCAGTGGATGCTCCGAAGT

mRNA sequence

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Protein sequence

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MVLWEITLATAYFLGLKRTYKLALKIQRRLVSPKHPRIRQFLRGRTRSVFDVAVKVHQNVQHQDIEVGKNFGNRILQWLNQMKPSAEIREHQDGAITGMKMIKQVSNSYL
KHRASPRAVISQKFDQYMSITSSIRRWPKPFPTFAMIMRQQKPAGTKIQYRQYSICGSEAMKTNYRRGSFDCVIREDIMQWMLRS

MS017519 (gene) of Bitter gourd (TR) v1 genome