CuGenDBv2

Gene ID	MS017541
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	50S ribosomal protein L35
Genome location	scaffold373:436380..439265
RNA-Seq Expression	MS017541
Synteny	MS017541
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR021137 - Ribosomal protein L35 IPR037229 - Ribosomal protein L35 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7036224.1 hypothetical protein SDJN02_03026 [Cucurbita argyrosperma subsp. argyrosperma]

3.4e-75

89.88

Show/hide

Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS+PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRS L PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

XP_022156090.1 uncharacterized protein LOC111023059 [Momordica charantia]

9.7e-83

99.4

Show/hide

Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSS LPLSVVQVRHVSSRERRKRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

XP_022931031.1 uncharacterized protein LOC111437349 [Cucurbita moschata]

8.8e-76

90.48

Show/hide

Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS+PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRSSL PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

XP_022996248.1 uncharacterized protein LOC111491530 [Cucurbita maxima]

8.0e-77

91.67

Show/hide

Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRSSL PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTK+KFYSSYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

XP_023532529.1 uncharacterized protein LOC111794661 [Cucurbita pepo subsp. pepo]

3.0e-76

91.07

Show/hide

Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS+PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRSSL PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBT5 Uncharacterized protein

1.5e-68

84.43

Show/hide

Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLR CAKLRSAAAKPSQ+++SVSSTRRIFHS+PSLYQPLHF+ NNL+SRS+FNAS QTHS LAAYQCIRSS LPLSVVQVRHVSSR+RR +RKP TP TS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFC
        KLKKTK+K YSSYKSRFW+MKDGSIKRR EGKRHNAH KSK+SKR+LR+PA VPLAYAKVMKKLNFC
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFC

A0A1S3CDR4 uncharacterized protein LOC103499252

2.7e-70

86.23

Show/hide

Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWCAKLRSAAAKPSQ+V SVSSTRRIFHS+PSLYQPLHF+PNNL+SRS+FNA  QTHS LAAYQCIRSSLLPLSVVQVRHVSSR+RR +RKP TP TS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFC
        KLKKTK+K YSSYKSRFW+MKDGSIKRR EGKRHNAH KSK+SKR+LR+PA VPLAYAKVMKKLNFC
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFC

A0A6J1DPB8 uncharacterized protein LOC111023059

4.7e-83

99.4

Show/hide

Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSS LPLSVVQVRHVSSRERRKRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

A0A6J1ESK5 uncharacterized protein LOC111437349

4.3e-76

90.48

Show/hide

Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS+PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRSSL PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQP TVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

A0A6J1KAA4 uncharacterized protein LOC111491530

3.9e-77

91.67

Show/hide

Query:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS
        MLRWC+KLRSAAAKPSQ+VHSVSSTRRIFHS PSLYQPLHF+PNNLSSRS+ NASLQTHSSLAAYQCIRSSL PL  VQVRHVSSRER+KRRKPMTPVTS
Subjt:  MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        KLKKTK+KFYSSYKSRFW+ KDGSIKRRKEGKRHNAHLKSKK+KRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G45590.1 Ribosomal protein L35

3.0e-29

46.51

Show/hide

Query:  MLRWCAKLRSAAAKPSQ-LVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRER----RKRRKPM
        M R+C KLRS + + ++ L    +S  R+ H SPS  + L       ++ + ++         +    + ++ +P   VQVR+++S+E+    +K+ +P 
Subjt:  MLRWCAKLRSAAAKPSQ-LVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRER----RKRRKPM

Query:  TPVTSKLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFC
        TP+TSK+KK K+KFYSS+K RF  + DG+I+R KEGKRHNAHLKSKKSKRRLRQP  VP AYAKVMKKLNFC
Subjt:  TPVTSKLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTCCGGTGGTGCGCGAAGCTCCGATCTGCGGCGGCGAAACCATCTCAACTCGTACATTCCGTTTCCTCCACCCGCAGGATCTTTCACTCTTCTCCATCACTGTACCA
GCCTCTCCATTTCGCTCCGAATAATTTGAGTTCCAGGTCCATTTTCAATGCATCTCTACAGACGCACTCTTCGCTCGCGGCTTACCAGTGTATTCGATCTTCACTCCTAC
CTCTCTCCGTTGTTCAAGTGCGGCATGTTTCGTCAAGAGAGCGACGGAAGAGGAGAAAGCCGATGACGCCAGTCACTTCCAAATTGAAGAAAACTAAGATGAAATTTTAC
TCTTCTTACAAGTCTAGGTTCTGGATGATGAAGGATGGGAGCATTAAACGTCGAAAGGAGGGGAAAAGGCACAATGCACATTTGAAGTCCAAGAAATCAAAACGTAGACT
GAGACAACCTGCCACTGTCCCATTAGCTTATGCCAAGGTAATGAAGAAGCTCAACTTTTGCGGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLRWCAKLRSAAAKPSQLVHSVSSTRRIFHSSPSLYQPLHFAPNNLSSRSIFNASLQTHSSLAAYQCIRSSLLPLSVVQVRHVSSRERRKRRKPMTPVTSKLKKTKMKFY
SSYKSRFWMMKDGSIKRRKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLNFCG

MS017541 (gene) of Bitter gourd (TR) v1 genome