; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017548 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017548
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTumor necrosis factor alpha-induced protein like
Genome locationscaffold373:472727..474588
RNA-Seq ExpressionMS017548
SyntenyMS017548
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144465.1 uncharacterized protein LOC101212399 isoform X2 [Cucumis sativus]6.8e-7582.76Show/hide
Query:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARN--TLSTISDLKDFASSLLVDLK
        M KKRG TRRSSAAELLETPPLTPPPA D+PKS IFN K NS   KLSSPENTN+AKN+V        AGLFKS  RN  +LS+ISDLKDFASS L+DLK
Subjt:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARN--TLSTISDLKDFASSLLVDLK

Query:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGI
        RHIDHSHSQIVKDLDSSNSRLQKRFKIQ QTCQ+MMDEAEKEYKKMS+RI ESQEAMKASYEEFLAHE+ESASRACKTS+TELSQSFERS+DALRSRFGI
Subjt:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGI

Query:  PST
        PST
Subjt:  PST

XP_011651686.1 uncharacterized protein LOC101212399 isoform X1 [Cucumis sativus]1.7e-7382.35Show/hide
Query:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARN--TLSTISDLKDFASSLLVDLK
        M KKRG TRRSSAAELLETPPLTPPPA D+PKS IFN K NS   KLSSPENTN+AKN+V        AGLFKS  RN  +LS+ISDLKDFASS L+DLK
Subjt:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARN--TLSTISDLKDFASSLLVDLK

Query:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASR-ACKTSVTELSQSFERSMDALRSRFG
        RHIDHSHSQIVKDLDSSNSRLQKRFKIQ QTCQ+MMDEAEKEYKKMS+RI ESQEAMKASYEEFLAHE+ESASR ACKTS+TELSQSFERS+DALRSRFG
Subjt:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASR-ACKTSVTELSQSFERSMDALRSRFG

Query:  IPST
        IPST
Subjt:  IPST

XP_022159662.1 uncharacterized protein LOC111026007 [Momordica charantia]4.4e-9899.5Show/hide
Query:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTKNSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARNTLSTISDLKDFASSLLVDLKRHI
        MVKKRGRTRRSSAAELLETPPLTPPP+ADTPKSTIFNTKNSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARNTLSTISDLKDFASSLLVDLKRHI
Subjt:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTKNSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARNTLSTISDLKDFASSLLVDLKRHI

Query:  DHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGIPST
        DHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGIPST
Subjt:  DHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGIPST

XP_022967652.1 uncharacterized protein LOC111467096 [Cucurbita maxima]3.7e-7379.8Show/hide
Query:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARN--TLSTISDLKDFASSLLVDLK
        M KKR RTRRSSAAELLETPP TPPPA D+PKS IFN K NSN  K SSPENTN+ KNR       + AGLFKSP+RN  +LSTISDLKDFA+S L+DLK
Subjt:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARN--TLSTISDLKDFASSLLVDLK

Query:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGI
        RHIDHSHSQI+KD +SS SRL+KRFKIQSQ CQ+MMDEAEKEYKKMS+RI ESQEAMKASYEEFLAHE ESASRACKTS+TELSQSFERS+DALRSRFGI
Subjt:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGI

Query:  PST
        PST
Subjt:  PST

XP_038887830.1 uncharacterized protein LOC120077835 isoform X2 [Benincasa hispida]9.8e-7481.28Show/hide
Query:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARNT--LSTISDLKDFASSLLVDLK
        M KKRG TRRSSAAELLETPPLTPPPA D+PKS IFN K NSN  K SSPENTN+AKNRV        A LFK P+RNT  LSTISDLKDFASS L+DLK
Subjt:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARNT--LSTISDLKDFASSLLVDLK

Query:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGI
        RHIDHSHSQIVKDLDSSNS LQKRFKIQSQ CQ+MMDEAEKEYKKMS+RI ESQE MKAS+EEFL HEQESASRACK S+TELSQSFERS+DALRSRFGI
Subjt:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGI

Query:  PST
         ST
Subjt:  PST

TrEMBL top hitse value%identityAlignment
A0A0A0LCH5 Uncharacterized protein3.3e-7582.76Show/hide
Query:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARN--TLSTISDLKDFASSLLVDLK
        M KKRG TRRSSAAELLETPPLTPPPA D+PKS IFN K NS   KLSSPENTN+AKN+V        AGLFKS  RN  +LS+ISDLKDFASS L+DLK
Subjt:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARN--TLSTISDLKDFASSLLVDLK

Query:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGI
        RHIDHSHSQIVKDLDSSNSRLQKRFKIQ QTCQ+MMDEAEKEYKKMS+RI ESQEAMKASYEEFLAHE+ESASRACKTS+TELSQSFERS+DALRSRFGI
Subjt:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGI

Query:  PST
        PST
Subjt:  PST

A0A5D3DBU5 Uncharacterized protein6.9e-7380.79Show/hide
Query:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARN--TLSTISDLKDFASSLLVDLK
        M KKRG TRRSSAAELLETPPLTPPPA D+PKS IFN K NS   K SSPENTN+AKN+V        AGLFKS  RN  +LS+ISDLKDFASS L+DLK
Subjt:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARN--TLSTISDLKDFASSLLVDLK

Query:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGI
        RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQ+MMDEAEKEYKKM++RI ESQEAMKASYEEFLAHE+ESASRACKT +TELSQ FERS+DALRSRFGI
Subjt:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGI

Query:  PST
         ST
Subjt:  PST

A0A6J1E0F3 uncharacterized protein LOC1110260072.1e-9899.5Show/hide
Query:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTKNSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARNTLSTISDLKDFASSLLVDLKRHI
        MVKKRGRTRRSSAAELLETPPLTPPP+ADTPKSTIFNTKNSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARNTLSTISDLKDFASSLLVDLKRHI
Subjt:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTKNSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARNTLSTISDLKDFASSLLVDLKRHI

Query:  DHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGIPST
        DHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGIPST
Subjt:  DHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGIPST

A0A6J1HH77 uncharacterized protein LOC111464038 isoform X26.9e-7379.8Show/hide
Query:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARN--TLSTISDLKDFASSLLVDLK
        M KKR RTRRSSAAELLETPP TP PA D+PKS IFN K NSN  K SSPENTN+ KNRV        AGLFKSP+RN  +LSTISDLKDFA+S L+DLK
Subjt:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARN--TLSTISDLKDFASSLLVDLK

Query:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGI
        RHIDHSHSQI+KD +SS SRL+KRFKIQSQ CQ+MMDEAEKEYKKMS+RI ESQEAMKASYEEFLAHE ESASRACKTS+TELSQSFERS+DALRSRFGI
Subjt:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGI

Query:  PST
        PST
Subjt:  PST

A0A6J1HRE1 uncharacterized protein LOC1114670961.8e-7379.8Show/hide
Query:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARN--TLSTISDLKDFASSLLVDLK
        M KKR RTRRSSAAELLETPP TPPPA D+PKS IFN K NSN  K SSPENTN+ KNR       + AGLFKSP+RN  +LSTISDLKDFA+S L+DLK
Subjt:  MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTK-NSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARN--TLSTISDLKDFASSLLVDLK

Query:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGI
        RHIDHSHSQI+KD +SS SRL+KRFKIQSQ CQ+MMDEAEKEYKKMS+RI ESQEAMKASYEEFLAHE ESASRACKTS+TELSQSFERS+DALRSRFGI
Subjt:  RHIDHSHSQIVKDLDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGI

Query:  PST
        PST
Subjt:  PST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGAAGAGGGGTCGAACTCGCCGGTCCTCAGCCGCGGAGCTTCTGGAAACGCCGCCTTTAACGCCTCCTCCGGCCGCCGACACTCCAAAGTCAACGATCTTCAA
CACAAAAAACAGCAATGAAAGGAAGTTATCTTCACCGGAGAACACCAACGTTGCGAAGAACAGAGTCGCTGCTGGTCTAGGTTCTTCCACTGCCGGTCTCTTCAAGTCGC
CTGCTCGAAATACTTTGAGCACTATATCTGATCTCAAGGACTTTGCGTCTTCGCTTCTCGTCGATCTCAAGCGCCACATTGATCACTCTCACTCACAGATTGTCAAAGAT
CTCGACTCCTCGAACTCACGCCTCCAAAAGCGATTTAAGATTCAAAGTCAAACATGCCAGCAAATGATGGATGAAGCAGAGAAGGAGTATAAGAAGATGTCCCGAAGAAT
TTGTGAGAGTCAGGAAGCAATGAAGGCTTCATACGAAGAGTTTTTGGCACATGAACAGGAGAGTGCATCTCGCGCTTGTAAAACATCCGTGACTGAACTTTCGCAATCCT
TTGAGAGATCAATGGATGCTCTTCGTAGCCGTTTCGGGATCCCGTCCACC
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGAAGAGGGGTCGAACTCGCCGGTCCTCAGCCGCGGAGCTTCTGGAAACGCCGCCTTTAACGCCTCCTCCGGCCGCCGACACTCCAAAGTCAACGATCTTCAA
CACAAAAAACAGCAATGAAAGGAAGTTATCTTCACCGGAGAACACCAACGTTGCGAAGAACAGAGTCGCTGCTGGTCTAGGTTCTTCCACTGCCGGTCTCTTCAAGTCGC
CTGCTCGAAATACTTTGAGCACTATATCTGATCTCAAGGACTTTGCGTCTTCGCTTCTCGTCGATCTCAAGCGCCACATTGATCACTCTCACTCACAGATTGTCAAAGAT
CTCGACTCCTCGAACTCACGCCTCCAAAAGCGATTTAAGATTCAAAGTCAAACATGCCAGCAAATGATGGATGAAGCAGAGAAGGAGTATAAGAAGATGTCCCGAAGAAT
TTGTGAGAGTCAGGAAGCAATGAAGGCTTCATACGAAGAGTTTTTGGCACATGAACAGGAGAGTGCATCTCGCGCTTGTAAAACATCCGTGACTGAACTTTCGCAATCCT
TTGAGAGATCAATGGATGCTCTTCGTAGCCGTTTCGGGATCCCGTCCACC
Protein sequenceShow/hide protein sequence
MVKKRGRTRRSSAAELLETPPLTPPPAADTPKSTIFNTKNSNERKLSSPENTNVAKNRVAAGLGSSTAGLFKSPARNTLSTISDLKDFASSLLVDLKRHIDHSHSQIVKD
LDSSNSRLQKRFKIQSQTCQQMMDEAEKEYKKMSRRICESQEAMKASYEEFLAHEQESASRACKTSVTELSQSFERSMDALRSRFGIPST