; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017567 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017567
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSpc97 / Spc98 family of spindle pole body (SBP) component
Genome locationscaffold373:640510..641439
RNA-Seq ExpressionMS017567
SyntenyMS017567
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0005319 - lipid transporter activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606306.1 hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sororia]5.6e-4985.95Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI
        MEEAKEILKDNRIED+SWLCSLSESELD LISIKMLVLQRAK+IGHE LAEKFDLKTLRA+GF LMEHLKGQL  S VPDQSQ +ALNG NLLD SLEK+
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI

Query:  LSIDEIMASVCSDRRKKPGKR
        LSID+IMAS+CS+RRKKPGKR
Subjt:  LSIDEIMASVCSDRRKKPGKR

XP_022156102.1 uncharacterized protein LOC111023068 [Momordica charantia]5.0e-58100Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI
        MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI

Query:  LSIDEIMASVCSDRRKKPGKR
        LSIDEIMASVCSDRRKKPGKR
Subjt:  LSIDEIMASVCSDRRKKPGKR

XP_022995750.1 uncharacterized protein LOC111491189 [Cucurbita maxima]3.3e-4986.78Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI
        MEEAKEILKDNRIED+SWLCSLSESELD LISIKMLVLQRAK+IGHE LAEKFDLKTLRA+GF LMEHLKGQL  S VPDQSQ +ALNG NLLD SLEKI
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI

Query:  LSIDEIMASVCSDRRKKPGKR
        LSID+IMAS+CS+RRKKPGKR
Subjt:  LSIDEIMASVCSDRRKKPGKR

XP_023533769.1 uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo]2.5e-4987.6Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI
        MEEAKEILKDNRIED+SWLCSLSESELD LISIKMLVLQRAK+IGHE LAEKFDLKTLRAIGF LMEHLKGQL  S VPDQSQ +ALNG NLLD SLEKI
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI

Query:  LSIDEIMASVCSDRRKKPGKR
        LSID+IMAS+CS+RRKKPGKR
Subjt:  LSIDEIMASVCSDRRKKPGKR

XP_038902583.1 uncharacterized protein LOC120089238 [Benincasa hispida]4.6e-5188.43Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI
        MEEAKEI K NRIED+SWLCSLSESELDMLISIKMLVLQRAK+IGHE LA+KFDLKT+RAIGF LMEHLKG+L+ASDVPD SQSAALNGCNLLD +LEKI
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI

Query:  LSIDEIMASVCSDRRKKPGKR
        LSIDEIMAS+CSDRRKKPGKR
Subjt:  LSIDEIMASVCSDRRKKPGKR

TrEMBL top hitse value%identityAlignment
A0A1S3BQH9 uncharacterized protein LOC1034924134.6e-4985.12Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI
        MEEA EILK+NR+ED+SWLCSLSESELD+LISIKMLVLQRAK IGHE LAEKFDLKTLRAIGF LMEHLKG+LR SDV D SQSA LN CNLLD ++EKI
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI

Query:  LSIDEIMASVCSDRRKKPGKR
        LSIDEIMAS+CSDRRKKPGKR
Subjt:  LSIDEIMASVCSDRRKKPGKR

A0A5A7UQA1 Uncharacterized protein4.6e-4985.12Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI
        MEEA EILK+NR+ED+SWLCSLSESELD+LISIKMLVLQRAK IGHE LAEKFDLKTLRAIGF LMEHLKG+LR SDV D SQSA LN CNLLD ++EKI
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI

Query:  LSIDEIMASVCSDRRKKPGKR
        LSIDEIMAS+CSDRRKKPGKR
Subjt:  LSIDEIMASVCSDRRKKPGKR

A0A6J1DR49 uncharacterized protein LOC1110230682.4e-58100Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI
        MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI

Query:  LSIDEIMASVCSDRRKKPGKR
        LSIDEIMASVCSDRRKKPGKR
Subjt:  LSIDEIMASVCSDRRKKPGKR

A0A6J1ESQ9 uncharacterized protein LOC1114374146.0e-4985.95Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI
        MEEAKEILKDNRIED+SWLCSLSESELD LISIKMLVLQRAK+IGHE LAEKFDLKTLRAIGF LMEHLKGQL  S VPDQSQ +ALNG NLLD SLEK+
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI

Query:  LSIDEIMASVCSDRRKKPGKR
        LSID+IMAS+C +RRKKPGKR
Subjt:  LSIDEIMASVCSDRRKKPGKR

A0A6J1K2S6 uncharacterized protein LOC1114911891.6e-4986.78Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI
        MEEAKEILKDNRIED+SWLCSLSESELD LISIKMLVLQRAK+IGHE LAEKFDLKTLRA+GF LMEHLKGQL  S VPDQSQ +ALNG NLLD SLEKI
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKI

Query:  LSIDEIMASVCSDRRKKPGKR
        LSID+IMAS+CS+RRKKPGKR
Subjt:  LSIDEIMASVCSDRRKKPGKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80245.1 Spc97 / Spc98 family of spindle pole body (SBP) component5.4e-2646.77Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLR--ASDVPD-QSQSAALNGCNLLDCSL
        MEE  +ILK+NR +D++W CSLSESELD+LIS+K L +QRAK+ GH+ LA+KFDLK LR++G  LMEH + +++   S  P    Q   L+ CNLL   +
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLR--ASDVPD-QSQSAALNGCNLLDCSL

Query:  EKILSIDEIMASVCSDRRKKPGKR
        +  + I+EI+  +C ++ KK  ++
Subjt:  EKILSIDEIMASVCSDRRKKPGKR

AT1G80245.2 Spc97 / Spc98 family of spindle pole body (SBP) component5.4e-2646.77Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLR--ASDVPD-QSQSAALNGCNLLDCSL
        MEE  +ILK+NR +D++W CSLSESELD+LIS+K L +QRAK+ GH+ LA+KFDLK LR++G  LMEH + +++   S  P    Q   L+ CNLL   +
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLR--ASDVPD-QSQSAALNGCNLLDCSL

Query:  EKILSIDEIMASVCSDRRKKPGKR
        +  + I+EI+  +C ++ KK  ++
Subjt:  EKILSIDEIMASVCSDRRKKPGKR

AT1G80245.3 Spc97 / Spc98 family of spindle pole body (SBP) component5.4e-2646.77Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLR--ASDVPD-QSQSAALNGCNLLDCSL
        MEE  +ILK+NR +D++W CSLSESELD+LIS+K L +QRAK+ GH+ LA+KFDLK LR++G  LMEH + +++   S  P    Q   L+ CNLL   +
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLR--ASDVPD-QSQSAALNGCNLLDCSL

Query:  EKILSIDEIMASVCSDRRKKPGKR
        +  + I+EI+  +C ++ KK  ++
Subjt:  EKILSIDEIMASVCSDRRKKPGKR

AT4G00695.1 FUNCTIONS IN: molecular_function unknown4.3e-2345.6Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEAL-AEKFDLKTLRAIGFALMEHLKGQLR--ASDVPDQSQS-AALNGCNLLDCS
        MEE  +ILK+NR +D++W CSLSESELD+LIS+K LV++RAK+ G E L A+KFDLK LR++G  LME+++ ++    S  P   Q  + L+ CNLL   
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEAL-AEKFDLKTLRAIGFALMEHLKGQLR--ASDVPDQSQS-AALNGCNLLDCS

Query:  LEKILSIDEIMASVCSDRRKKPGKR
        ++  + I+EI+  +C+ + KK  ++
Subjt:  LEKILSIDEIMASVCSDRRKKPGKR

AT4G00695.2 FUNCTIONS IN: molecular_function unknown4.3e-2345.6Show/hide
Query:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEAL-AEKFDLKTLRAIGFALMEHLKGQLR--ASDVPDQSQS-AALNGCNLLDCS
        MEE  +ILK+NR +D++W CSLSESELD+LIS+K LV++RAK+ G E L A+KFDLK LR++G  LME+++ ++    S  P   Q  + L+ CNLL   
Subjt:  MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEAL-AEKFDLKTLRAIGFALMEHLKGQLR--ASDVPDQSQS-AALNGCNLLDCS

Query:  LEKILSIDEIMASVCSDRRKKPGKR
        ++  + I+EI+  +C+ + KK  ++
Subjt:  LEKILSIDEIMASVCSDRRKKPGKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGGATCGAAGATGTCAGTTGGCTGTGTTCGCTATCTGAATCGGAGCTTGACATGCTAATTAGCATTAAAATGCTAGT
TCTCCAACGTGCAAAAATGATTGGCCATGAAGCTCTTGCTGAGAAATTTGATCTGAAGACACTACGTGCTATTGGGTTTGCCTTGATGGAACATCTTAAAGGACAACTTA
GGGCGTCAGATGTTCCAGATCAGTCTCAGTCTGCTGCCTTAAATGGATGCAACTTATTAGACTGCAGTCTTGAGAAGATTTTGTCAATTGATGAGATAATGGCAAGTGTT
TGTTCTGACAGAAGGAAGAAACCTGGAAAAAGGTTGGTAAAAACTACAAGTGGCTGTTGTTGTATTGTG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGGATCGAAGATGTCAGTTGGCTGTGTTCGCTATCTGAATCGGAGCTTGACATGCTAATTAGCATTAAAATGCTAGT
TCTCCAACGTGCAAAAATGATTGGCCATGAAGCTCTTGCTGAGAAATTTGATCTGAAGACACTACGTGCTATTGGGTTTGCCTTGATGGAACATCTTAAAGGACAACTTA
GGGCGTCAGATGTTCCAGATCAGTCTCAGTCTGCTGCCTTAAATGGATGCAACTTATTAGACTGCAGTCTTGAGAAGATTTTGTCAATTGATGAGATAATGGCAAGTGTT
TGTTCTGACAGAAGGAAGAAACCTGGAAAAAGGTTGGTAAAAACTACAAGTGGCTGTTGTTGTATTGTG
Protein sequenceShow/hide protein sequence
MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRAIGFALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASV
CSDRRKKPGKRLVKTTSGCCCIV