; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017572 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017572
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE3 ubiquitin-protein ligase RNF4-like
Genome locationscaffold373:671815..675716
RNA-Seq ExpressionMS017572
SyntenyMS017572
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144388.1 E3 ubiquitin-protein ligase RNF4 [Cucumis sativus]6.8e-9489.32Show/hide
Query:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQAMRG T RGYHRRKSLDLDLNSMPP+ENRDQGE SQL LQ+A  NQQQP+QP MIDIEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEERS
Subjt:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL
        RVSNN RSKRRR+VSN+ +VNS+LLINLEASNSS+K KP PPKEPKFSCPICMGPLVEETSTRCGHIFCKACI+AAI VQSKCPTCRKRVTAKELIRVFL
Subjt:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

XP_008460369.1 PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X1 [Cucumis melo]5.7e-9388.35Show/hide
Query:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQAMRG   RGYHRRKSLDLDLNSMPP+ENRDQGE SQL LQ+A  NQQQP+QP MIDIEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEERS
Subjt:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL
        RVSNN RSKRRR+VSN+ +VNS+LLINLEASNSS+K KP PPKEPKFSCPICMGPLVEETST+CGHIFCKACI+AAI VQSKCPTCRKRVTAKELIRVFL
Subjt:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

XP_022158086.1 E3 ubiquitin-protein ligase RNF4 isoform X1 [Momordica charantia]1.1e-10499.04Show/hide
Query:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
Subjt:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSL--KEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRV
        RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSL  KEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRV
Subjt:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSL--KEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRV

Query:  FLPGTSLE
        FLPGTSLE
Subjt:  FLPGTSLE

XP_022158096.1 E3 ubiquitin-protein ligase RNF4 isoform X2 [Momordica charantia]3.5e-106100Show/hide
Query:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
Subjt:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL
        RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL
Subjt:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

XP_022967334.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima]2.6e-9389.32Show/hide
Query:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MST+AMRG TARGYHRRKSLDLDLNSMPP+ENRDQGE SQ G QEA  NQQQ +QP MIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
Subjt:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL
        R SNN RSKRRR+V NQ+TVNS+LLINLEASNSS+KEK  PPKEP FSCPICMGPLVEETSTRCGHIFCKACIK AIAVQSKCPTCRKRVTAKELIRVFL
Subjt:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

TrEMBL top hitse value%identityAlignment
A0A1S3CCB4 E3 ubiquitin-protein ligase RNF4-like isoform X12.8e-9388.35Show/hide
Query:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQAMRG   RGYHRRKSLDLDLNSMPP+ENRDQGE SQL LQ+A  NQQQP+QP MIDIEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEERS
Subjt:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL
        RVSNN RSKRRR+VSN+ +VNS+LLINLEASNSS+K KP PPKEPKFSCPICMGPLVEETST+CGHIFCKACI+AAI VQSKCPTCRKRVTAKELIRVFL
Subjt:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

A0A6J1DZZ9 E3 ubiquitin-protein ligase RNF4 isoform X15.4e-10599.04Show/hide
Query:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
Subjt:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSL--KEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRV
        RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSL  KEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRV
Subjt:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSL--KEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRV

Query:  FLPGTSLE
        FLPGTSLE
Subjt:  FLPGTSLE

A0A6J1E010 E3 ubiquitin-protein ligase RNF4 isoform X21.7e-106100Show/hide
Query:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
Subjt:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL
        RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL
Subjt:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

A0A6J1HFU4 E3 ubiquitin-protein ligase RNF4-like6.2e-9388.83Show/hide
Query:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQAMRG TARGYHRRKSLDLDLNSMPP+ENRDQGE SQ G  EA  NQQQ +QP MIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
Subjt:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL
        R SNN RSKRRR+V NQ+TVNS+LLINLE SNSS+KEK  PPKEP FSCPICMGPLVEETSTRCGHIFCKACIK AIAVQSKCPTCRKRVTAKELIRVFL
Subjt:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

A0A6J1HQI7 E3 ubiquitin-protein ligase RNF4-like1.2e-9389.32Show/hide
Query:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MST+AMRG TARGYHRRKSLDLDLNSMPP+ENRDQGE SQ G QEA  NQQQ +QP MIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
Subjt:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL
        R SNN RSKRRR+V NQ+TVNS+LLINLEASNSS+KEK  PPKEP FSCPICMGPLVEETSTRCGHIFCKACIK AIAVQSKCPTCRKRVTAKELIRVFL
Subjt:  RVSNNIRSKRRREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

SwissProt top hitse value%identityAlignment
B5DF45 TNF receptor-associated factor 62.1e-0553.33Show/hide
Query:  PPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIA-VQSKCP
        PP E K+ CPIC+  L E   T CGH FCKACI  +I     KCP
Subjt:  PPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIA-VQSKCP

E7FDW2 E3 ubiquitin-protein ligase PDZRN3-B2.7e-0538.18Show/hide
Query:  EPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRV
        +P F C +C   L +  +T CGH+FC  C+   +  QS CP   +R++ KEL  V
Subjt:  EPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRV

Q28DL4 TNF receptor-associated factor 62.1e-0544.64Show/hide
Query:  PPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIA-VQSKCPTCRKRVTAKEL
        PP E K+ CPIC+  L E   T CGH FCKACI  +I     KCP   + +   +L
Subjt:  PPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIA-VQSKCPTCRKRVTAKEL

Q3MV19 TNF receptor-associated factor 6-A1.2e-0546.43Show/hide
Query:  PPKEPKFSCPICMGPLVEETSTRCGHIFCKACI-KAAIAVQSKCPTCRKRVTAKEL
        PP E K+ CPIC+  L E   T CGH FCKACI K+      KCP   + +  K+L
Subjt:  PPKEPKFSCPICMGPLVEETSTRCGHIFCKACI-KAAIAVQSKCPTCRKRVTAKEL

Q9CQ29 RING finger protein 1517.7e-0845.61Show/hide
Query:  PKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRV
        P + KF C +C G L   T   C HIFCK CI   +A Q+ CP CRK VT ++++ V
Subjt:  PKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRV

Arabidopsis top hitse value%identityAlignment
AT3G07200.1 RING/U-box superfamily protein3.3e-3049.44Show/hide
Query:  SENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAI--DDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRVSNNIRSKRRREVSNQRTVNSNLLIN
        ++N  QG+  Q    +A +  Q    P  I++ AI  DDDV+ES+A AFA+AKNKS R+AR+    VD E     +   RS RRR  S+Q +V+S  L  
Subjt:  SENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAI--DDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRVSNNIRSKRRREVSNQRTVNSNLLIN

Query:  LEASNSSLKEKPVPP--KEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFLPGT
            N   K K V P  +EPKFSCPIC+ P  +E ST+CGHIFCK CIK A+++Q+KCPTCRK++T K+LIRVFLP T
Subjt:  LEASNSSLKEKPVPP--KEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFLPGT

AT3G07200.2 RING/U-box superfamily protein3.3e-3049.44Show/hide
Query:  SENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAI--DDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRVSNNIRSKRRREVSNQRTVNSNLLIN
        ++N  QG+  Q    +A +  Q    P  I++ AI  DDDV+ES+A AFA+AKNKS R+AR+    VD E     +   RS RRR  S+Q +V+S  L  
Subjt:  SENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAI--DDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRVSNNIRSKRRREVSNQRTVNSNLLIN

Query:  LEASNSSLKEKPVPP--KEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFLPGT
            N   K K V P  +EPKFSCPIC+ P  +E ST+CGHIFCK CIK A+++Q+KCPTCRK++T K+LIRVFLP T
Subjt:  LEASNSSLKEKPVPP--KEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFLPGT

AT5G48655.1 RING/U-box superfamily protein3.2e-4150.48Show/hide
Query:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEE
        M+T  +R    RG  RRK++ +DLN++P  +   +G  + +          QP  PTMID++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++  
Subjt:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEE

Query:  RSRVSNNIRSKRRREVSNQRTVNS-----NLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAK
         +R   NI +KRRR  S++  ++      N  +N+ +  S  K    PP+EPKF+CPICM P  EE ST+CGHIFCK CIK AI+ Q KCPTCRK+VTAK
Subjt:  RSRVSNNIRSKRRREVSNQRTVNS-----NLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAK

Query:  ELIRVFLPGT
        ELIRVFLP T
Subjt:  ELIRVFLPGT

AT5G48655.2 RING/U-box superfamily protein3.2e-4150.48Show/hide
Query:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEE
        M+T  +R    RG  RRK++ +DLN++P  +   +G  + +          QP  PTMID++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++  
Subjt:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEE

Query:  RSRVSNNIRSKRRREVSNQRTVNS-----NLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAK
         +R   NI +KRRR  S++  ++      N  +N+ +  S  K    PP+EPKF+CPICM P  EE ST+CGHIFCK CIK AI+ Q KCPTCRK+VTAK
Subjt:  RSRVSNNIRSKRRREVSNQRTVNS-----NLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAK

Query:  ELIRVFLPGT
        ELIRVFLP T
Subjt:  ELIRVFLPGT

AT5G48655.3 RING/U-box superfamily protein3.2e-4150.48Show/hide
Query:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEE
        M+T  +R    RG  RRK++ +DLN++P  +   +G  + +          QP  PTMID++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++  
Subjt:  MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEE

Query:  RSRVSNNIRSKRRREVSNQRTVNS-----NLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAK
         +R   NI +KRRR  S++  ++      N  +N+ +  S  K    PP+EPKF+CPICM P  EE ST+CGHIFCK CIK AI+ Q KCPTCRK+VTAK
Subjt:  RSRVSNNIRSKRRREVSNQRTVNS-----NLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAK

Query:  ELIRVFLPGT
        ELIRVFLP T
Subjt:  ELIRVFLPGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACTCAGGCAATGAGGGGAACTACTGCTAGAGGGTATCATCGTAGGAAATCATTGGATTTAGACCTAAACAGCATGCCACCAAGTGAGAACCGAGATCAAGGGGA
GCCATCTCAATTGGGGTTGCAGGAAGCACACAGTAATCAACAACAGCCCTTACAACCTACAATGATTGACATTGAGGCCATTGATGATGATGTTATTGAATCATCTGCCA
GGGCATTTGCTGAAGCTAAAAATAAATCCAGACGGAATGCTAGGAAGAATATAGTTGATGTGGATGCAGAAGAGCGAAGCAGGGTGTCAAATAATATTCGGAGCAAGCGC
AGGAGGGAAGTGTCAAATCAACGAACTGTAAATTCTAATTTATTAATCAATTTGGAAGCCAGCAACAGCTCTCTGAAAGAGAAGCCTGTTCCACCTAAGGAGCCCAAATT
CAGTTGCCCAATATGCATGGGCCCATTAGTAGAGGAAACATCAACAAGGTGTGGTCATATTTTCTGCAAGGCGTGCATTAAAGCTGCAATAGCCGTGCAGAGTAAATGCC
CTACCTGTAGGAAGAGAGTAACTGCCAAAGAACTCATTAGAGTGTTCCTTCCTGGGACAAGCTTGGAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTACTCAGGCAATGAGGGGAACTACTGCTAGAGGGTATCATCGTAGGAAATCATTGGATTTAGACCTAAACAGCATGCCACCAAGTGAGAACCGAGATCAAGGGGA
GCCATCTCAATTGGGGTTGCAGGAAGCACACAGTAATCAACAACAGCCCTTACAACCTACAATGATTGACATTGAGGCCATTGATGATGATGTTATTGAATCATCTGCCA
GGGCATTTGCTGAAGCTAAAAATAAATCCAGACGGAATGCTAGGAAGAATATAGTTGATGTGGATGCAGAAGAGCGAAGCAGGGTGTCAAATAATATTCGGAGCAAGCGC
AGGAGGGAAGTGTCAAATCAACGAACTGTAAATTCTAATTTATTAATCAATTTGGAAGCCAGCAACAGCTCTCTGAAAGAGAAGCCTGTTCCACCTAAGGAGCCCAAATT
CAGTTGCCCAATATGCATGGGCCCATTAGTAGAGGAAACATCAACAAGGTGTGGTCATATTTTCTGCAAGGCGTGCATTAAAGCTGCAATAGCCGTGCAGAGTAAATGCC
CTACCTGTAGGAAGAGAGTAACTGCCAAAGAACTCATTAGAGTGTTCCTTCCTGGGACAAGCTTGGAG
Protein sequenceShow/hide protein sequence
MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRVSNNIRSKR
RREVSNQRTVNSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQSKCPTCRKRVTAKELIRVFLPGTSLE