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MS017573 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017573
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationscaffold373:683826..684017
RNA-Seq ExpressionMS017573
SyntenyMS017573
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7845583.1 RPM1-interacting protein 4 [Senna tora]8.2e-0647.76Show/hide
Query:  EAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQEAARAPTLP-------RSTVNSTQNQDHEHNQKV
        +AAVPKFGEW++ D  + D +T IFN+VRE RQ A +AP  P       RS  N  + Q H+H Q V
Subjt:  EAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQEAARAPTLP-------RSTVNSTQNQDHEHNQKV

KAG6606311.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1168.33Show/hide
Query:  EAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRSTVNSTQNQDHEHNQK
        E AVPKFGEWNDRDAT PDNYTAIF +VRE RQ + AR PTLP+++ N   NQ+ E NQK
Subjt:  EAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRSTVNSTQNQDHEHNQK

KAG7036250.1 hypothetical protein SDJN02_03052 [Cucurbita argyrosperma subsp. argyrosperma]5.8e-1268.85Show/hide
Query:  EAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRSTVNSTQNQDHEHNQKV
        E AVPKFGEWNDRDAT PDNYTAIF +VRE RQ + AR PTLP+++ N   NQ+ E NQKV
Subjt:  EAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRSTVNSTQNQDHEHNQKV

XP_035547329.1 RPM1-interacting protein 4-like [Juglans regia]1.2e-0449.15Show/hide
Query:  AAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRSTVNSTQNQDHEHNQK
        AAVPKFGEW++ +  + D +T IFN+VRE RQ    R P  P +  N+T+NQD + N K
Subjt:  AAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRSTVNSTQNQDHEHNQK

XP_038888923.1 RPM1-interacting protein 4-like [Benincasa hispida]1.6e-1472.58Show/hide
Query:  NDEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQE-AARAPTLPRSTVNSTQNQDHEHNQK
        ++EA VPKFGEW+DRDA AP+NYTAIF +VREGRQE   RA T PRS  NST NQ+HEHNQK
Subjt:  NDEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQE-AARAPTLPRSTVNSTQNQDHEHNQK

TrEMBL top hitse value%identityAlignment
A0A0A0L950 AvrRpt-cleavage domain-containing protein7.7e-1058.06Show/hide
Query:  NDEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQEAARAPTLPRSTVNSTQNQDHEHNQKV
        ++E AVPKFGEW+D DA AP+NYTAIFN+VRE RQ+     T P   ++ST +Q+HE NQK+
Subjt:  NDEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQEAARAPTLPRSTVNSTQNQDHEHNQKV

A0A251J307 AvrRpt-cleavage domain-containing protein2.2e-0447.37Show/hide
Query:  NDEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRSTVNSTQNQDH
        +D AAVPKFGEW++ +  + D YT IFN+VRE RQ   A+ P LP  T +S  ++ +
Subjt:  NDEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRSTVNSTQNQDH

A0A251J317 AvrRpt-cleavage domain-containing protein2.2e-0447.37Show/hide
Query:  NDEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRSTVNSTQNQDH
        +D AAVPKFGEW++ +  + D YT IFN+VRE RQ   A+ P LP  T +S  ++ +
Subjt:  NDEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRSTVNSTQNQDH

A0A6A6KKB4 Uncharacterized protein9.8e-0548.39Show/hide
Query:  DEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRSTVNSTQNQDHEHNQKV
        D +AVPKFGEW++ D  + D YT IFN+VRE +Q  AA+ P LP     +  +Q H H Q V
Subjt:  DEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRSTVNSTQNQDHEHNQKV

A0A6P9EIK4 RPM1-interacting protein 4-like5.7e-0549.15Show/hide
Query:  AAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRSTVNSTQNQDHEHNQK
        AAVPKFGEW++ +  + D +T IFN+VRE RQ    R P  P +  N+T+NQD + N K
Subjt:  AAVPKFGEWNDRDATAPDNYTAIFNRVREGRQ-EAARAPTLPRSTVNSTQNQDHEHNQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25070.1 RPM1 interacting protein 41.6e-0440.38Show/hide
Query:  VPKFGEWNDRDATAPDNYTAIFNRVREGRQEAARAPTLPRS-TVNSTQNQDH
        VPKFG+W++ + ++ D YT IFN+VRE R   A      R+ T  S++N ++
Subjt:  VPKFGEWNDRDATAPDNYTAIFNRVREGRQEAARAPTLPRS-TVNSTQNQDH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAAAAGAATGACGAAGCTGCAGTTCCAAAATTTGGTGAATGGAACGATAGGGACGCGACAGCACCGGACAACTACACAGCTATTTTCAACAGGGTGCGGGAGGGGAGACA
GGAGGCAGCTAGAGCACCGACACTGCCGCGGTCGACCGTTAACAGCACACAGAACCAAGATCATGAACACAACCAAAAGGTA
mRNA sequenceShow/hide mRNA sequence
CAAAAGAATGACGAAGCTGCAGTTCCAAAATTTGGTGAATGGAACGATAGGGACGCGACAGCACCGGACAACTACACAGCTATTTTCAACAGGGTGCGGGAGGGGAGACA
GGAGGCAGCTAGAGCACCGACACTGCCGCGGTCGACCGTTAACAGCACACAGAACCAAGATCATGAACACAACCAAAAGGTA
Protein sequenceShow/hide protein sequence
QKNDEAAVPKFGEWNDRDATAPDNYTAIFNRVREGRQEAARAPTLPRSTVNSTQNQDHEHNQKV