; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017578 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017578
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncytochrome b5
Genome locationscaffold373:722813..724156
RNA-Seq ExpressionMS017578
SyntenyMS017578
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001199 - Cytochrome b5-like heme/steroid binding domain
IPR018506 - Cytochrome b5, heme-binding site
IPR036400 - Cytochrome b5-like heme/steroid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606316.1 hypothetical protein SDJN03_03633, partial [Cucurbita argyrosperma subsp. sororia]4.7e-6493.13Show/hide
Query:  GGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDK
        G TV+TLAEVASHD+RNDCWLIIE+KVYDVTKFLEDHPGGDEVLLSAIGKDATNDF DVGHSSAARAMM+EFYVGDIDSSTIP KRKYTPPKQPLYNQDK
Subjt:  GGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDK

Query:  TPEFIIKVLQFLAPMVILGLAFGVHLYTKTT
        TPEFIIKVLQFLAPMVIL LAFG+HLYTKTT
Subjt:  TPEFIIKVLQFLAPMVILGLAFGVHLYTKTT

XP_022155479.1 cytochrome b5, seed isoform [Momordica charantia]1.7e-69100Show/hide
Query:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD
        GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD
Subjt:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD

Query:  KTPEFIIKVLQFLAPMVILGLAFGVHLYTKTT
        KTPEFIIKVLQFLAPMVILGLAFGVHLYTKTT
Subjt:  KTPEFIIKVLQFLAPMVILGLAFGVHLYTKTT

XP_022931194.1 cytochrome b5, seed isoform-like [Cucurbita moschata]1.0e-6392.37Show/hide
Query:  GGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDK
        G TV+TLAEVASHD+RNDCWLIIE+KVYDVTKFLEDHPGGDEVLLSAIGKDATNDF DVGHSSAARAMM+EFY+GDIDSSTIP KRKYTPPKQPLYNQDK
Subjt:  GGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDK

Query:  TPEFIIKVLQFLAPMVILGLAFGVHLYTKTT
        TPEFIIKVLQFLAP+VIL LAFGVHLYTKTT
Subjt:  TPEFIIKVLQFLAPMVILGLAFGVHLYTKTT

XP_023534065.1 cytochrome b5, seed isoform-like [Cucurbita pepo subsp. pepo]1.0e-6392.37Show/hide
Query:  GGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDK
        G TV+TLAEVASHD+RNDCWLIIE+KVYDVTKFLEDHPGGDEVLLSAIGKDATNDF DVGHSSAARAMM+EFYVGDIDSSTIP KRKYTPPKQPLYNQDK
Subjt:  GGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDK

Query:  TPEFIIKVLQFLAPMVILGLAFGVHLYTKTT
        TPEFIIKVLQFLAP+VIL LAFG+HLYTKTT
Subjt:  TPEFIIKVLQFLAPMVILGLAFGVHLYTKTT

XP_038889018.1 cytochrome b5, seed isoform isoform X3 [Benincasa hispida]2.3e-6390.15Show/hide
Query:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD
        GG TV++LAEVASHD+RNDCWLIIE+KVYDVTKFLEDHPGGDEVLLS +GKDATNDF DVGHSSAARAMM+EFYVGDIDSSTIPAKR YTPPKQPLYNQD
Subjt:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD

Query:  KTPEFIIKVLQFLAPMVILGLAFGVHLYTKTT
        KTPEFIIKVLQFLAP++ILGLAFG+HLYTKTT
Subjt:  KTPEFIIKVLQFLAPMVILGLAFGVHLYTKTT

TrEMBL top hitse value%identityAlignment
A0A1S3CMW3 cytochrome b5, seed isoform-like7.3e-6389.39Show/hide
Query:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD
        GG +V+TLAEVASHD+RNDCWLIIE+KVYDVTKFLEDHPGGDEVLLS +GKDATNDF DVGHSS ARAMM+EFYVGDIDSSTIPAKR+YTPPKQPLYNQD
Subjt:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD

Query:  KTPEFIIKVLQFLAPMVILGLAFGVHLYTKTT
        KTPEFIIKVLQFLAP+VILGLAFG+HLY KTT
Subjt:  KTPEFIIKVLQFLAPMVILGLAFGVHLYTKTT

A0A5A7UKQ8 Cytochrome b5, seed isoform-like7.3e-6389.39Show/hide
Query:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD
        GG +V+TLAEVASHD+RNDCWLIIE+KVYDVTKFLEDHPGGDEVLLS +GKDATNDF DVGHSS ARAMM+EFYVGDIDSSTIPAKR+YTPPKQPLYNQD
Subjt:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD

Query:  KTPEFIIKVLQFLAPMVILGLAFGVHLYTKTT
        KTPEFIIKVLQFLAP+VILGLAFG+HLY KTT
Subjt:  KTPEFIIKVLQFLAPMVILGLAFGVHLYTKTT

A0A6J1DQD9 cytochrome b5, seed isoform8.0e-70100Show/hide
Query:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD
        GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD
Subjt:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD

Query:  KTPEFIIKVLQFLAPMVILGLAFGVHLYTKTT
        KTPEFIIKVLQFLAPMVILGLAFGVHLYTKTT
Subjt:  KTPEFIIKVLQFLAPMVILGLAFGVHLYTKTT

A0A6J1ETM5 cytochrome b5, seed isoform-like5.0e-6492.37Show/hide
Query:  GGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDK
        G TV+TLAEVASHD+RNDCWLIIE+KVYDVTKFLEDHPGGDEVLLSAIGKDATNDF DVGHSSAARAMM+EFY+GDIDSSTIP KRKYTPPKQPLYNQDK
Subjt:  GGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDK

Query:  TPEFIIKVLQFLAPMVILGLAFGVHLYTKTT
        TPEFIIKVLQFLAP+VIL LAFGVHLYTKTT
Subjt:  TPEFIIKVLQFLAPMVILGLAFGVHLYTKTT

A0A6J1K3E7 cytochrome b5, seed isoform-like3.3e-6390.84Show/hide
Query:  GGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDK
        G T++TLAEVASHD+RNDCWLIIE+KVYDVTKFLEDHPGGDEVLLSAIGKDATNDF DVGHSS ARAMM+EFYVGDIDSSTIP KRKYTPPKQPLYNQDK
Subjt:  GGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDK

Query:  TPEFIIKVLQFLAPMVILGLAFGVHLYTKTT
        TPEFIIKVLQFLAP+VIL LAFG+HLYTKTT
Subjt:  TPEFIIKVLQFLAPMVILGLAFGVHLYTKTT

SwissProt top hitse value%identityAlignment
O04354 Cytochrome b52.5e-5271.54Show/hide
Query:  GTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKT
        G ++TLAEVA H++  DCWLII  KVYDVTKFLEDHPGGD+VLLSA GKDAT+DF+D+GHSS+A+AM+DE+YVGDIDSS+IP++ KYTPPKQPLYN DKT
Subjt:  GTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKT

Query:  PEFIIKVLQFLAPMVILGLAFGVHLYTKTT
         EF+IK+LQFL P+VIL  A G+  YTK++
Subjt:  PEFIIKVLQFLAPMVILGLAFGVHLYTKTT

P49097 Cytochrome b59.5e-5271.54Show/hide
Query:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD
        GG  VY+LAEV+ H   NDCWL+I  KVYDVTKFL+DHPGG +VLLS+  KDAT+DF+D+GHSS+ARAMMDE  VGDIDSSTIP K  YTPPKQPLYNQD
Subjt:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD

Query:  KTPEFIIKVLQFLAPMVILGLAFGVHLYTK
        KTP+FIIK+LQFL P++ILG+A G+  Y K
Subjt:  KTPEFIIKVLQFLAPMVILGLAFGVHLYTK

P49098 Cytochrome b51.0e-5373.28Show/hide
Query:  GGGT-VYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQ
        GG T V+TLAEV+ H++  DCWL+I  KVYDVTKFL+DHPGGDEVLLSA GKDAT+DF+DVGHSS+ARAM+DE+YVGDIDS+TIP K KYTPP QP YNQ
Subjt:  GGGT-VYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQ

Query:  DKTPEFIIKVLQFLAPMVILGLAFGVHLYTK
        DKT EF++K+LQFL P++ILG+AFG+  YTK
Subjt:  DKTPEFIIKVLQFLAPMVILGLAFGVHLYTK

P49099 Cytochrome b5, seed isoform1.2e-5475.38Show/hide
Query:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD
        G   V+TLAEV++H++  DCWLII  KVY+VTKFLEDHPGG EVLLSA GKDAT+DF+D+GHSS+ARAM+DE+YVGDIDSSTIP K KYTPPKQP YNQD
Subjt:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQD

Query:  KTPEFIIKVLQFLAPMVILGLAFGVHLYTK
        KT EFI+K+LQFL P++ILG+AFGVH YTK
Subjt:  KTPEFIIKVLQFLAPMVILGLAFGVHLYTK

P49100 Cytochrome b52.9e-5374.8Show/hide
Query:  VYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTPE
        VYTL EVA H+S++DCWLII  KVY+V+KFLEDHPGGD+VLLS+ GKDAT+DF+DVGHS+ ARAMMDE+YVGDID+STIPA+ KY PPKQP YNQDKTPE
Subjt:  VYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTPE

Query:  FIIKVLQFLAPMVILGLAFGVHLYTKT
        FIIK+LQFL P+ ILGLA  + +YTK+
Subjt:  FIIKVLQFLAPMVILGLAFGVHLYTKT

Arabidopsis top hitse value%identityAlignment
AT1G26340.1 cytochrome B5 isoform A2.0e-2535.82Show/hide
Query:  VYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTPE
        +Y++ E A+H+ ++DCW++I+ KVYDV+ ++++HPGGD+VLL+  GKDAT+DF+D GHS  AR +M+++++G++D S++P       P+  +Y +D+  +
Subjt:  VYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTPE

Query:  FIIKVLQ-----FLAPMVILGLAFGVH-LYTKTT
         + K+       ++ P+ I+ ++  V  L+++ T
Subjt:  FIIKVLQ-----FLAPMVILGLAFGVH-LYTKTT

AT2G32720.1 cytochrome B5 isoform B1.8e-5067.72Show/hide
Query:  VYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTPE
        ++TL+EV+ H+  +DCW++I  KVY+VTKFLEDHPGGD+VLLS+ GKDAT+DF+DVGHS +AR MM+++YVG+ID +TIP K KYTPPKQP YNQDKT E
Subjt:  VYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTPE

Query:  FIIKVLQFLAPMVILGLAFGVHLYTKT
        FIIK+LQFL P+ ILGLA G+ +YTK+
Subjt:  FIIKVLQFLAPMVILGLAFGVHLYTKT

AT2G46650.1 cytochrome B5 isoform C1.5e-2844.63Show/hide
Query:  EVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPP--KQPLYNQDKTPEFII
        +VA H  +NDCW++I  KVYD++ F+++HPGGD VLL+  GKDA+ DF+DV HS  A+ +M ++ +GD+D ST+P  ++Y PP  K+    +    E   
Subjt:  EVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPP--KQPLYNQDKTPEFII

Query:  KVLQFLAPMVILGLAFGVHLY
        K+L +L P++ILG+AF +  Y
Subjt:  KVLQFLAPMVILGLAFGVHLY

AT5G48810.1 cytochrome B5 isoform D2.9e-4862.41Show/hide
Query:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPP--KQPLYN
        G G V+TL+EV+ H S  DCW++I+ KVYDVTKFL+DHPGGDEV+L++ GKDAT+DF+DVGHSS A+AM+DE+YVGDID++T+P K K+ PP   + +  
Subjt:  GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPP--KQPLYN

Query:  QDKTPEFIIKVLQFLAPMVILGLAFGVHLYTKT
        QDK+ +F+IK+LQFL P++ILGLAFG+  YTKT
Subjt:  QDKTPEFIIKVLQFLAPMVILGLAFGVHLYTKT

AT5G53560.1 cytochrome B5 isoform E2.5e-4766.67Show/hide
Query:  VYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTPE
        V +  EV+ H+   DCWLII  KVYDVT F++DHPGGDEVLLS+ GKDATNDF+DVGHS  AR MMD++++G+IDSS++PA R Y  P+QP YNQDKTPE
Subjt:  VYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTPE

Query:  FIIKVLQFLAPMVILGLAFGVHLYTK
        FIIK+LQFL P++ILGLA  V  YTK
Subjt:  FIIKVLQFLAPMVILGLAFGVHLYTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCGGGGGCACGGTCTACACTTTGGCTGAGGTTGCCTCCCACGACAGTCGCAACGACTGCTGGCTGATCATTGAGAACAAGGTCTATGATGTAACAAAATTCCTAGAAGA
CCATCCTGGTGGTGATGAAGTCTTGTTGTCAGCCATCGGTAAGGATGCAACGAATGATTTTGACGATGTTGGGCACAGTAGCGCTGCTAGAGCAATGATGGATGAGTTTT
ACGTAGGTGATATTGATAGCTCGACTATTCCCGCAAAAAGAAAGTACACTCCTCCAAAGCAGCCCCTATACAACCAAGACAAGACACCAGAATTCATTATCAAGGTCCTC
CAGTTTCTAGCTCCCATGGTAATCTTGGGTTTGGCTTTTGGCGTCCACCTTTATACCAAAACGACT
mRNA sequenceShow/hide mRNA sequence
GGCGGGGGCACGGTCTACACTTTGGCTGAGGTTGCCTCCCACGACAGTCGCAACGACTGCTGGCTGATCATTGAGAACAAGGTCTATGATGTAACAAAATTCCTAGAAGA
CCATCCTGGTGGTGATGAAGTCTTGTTGTCAGCCATCGGTAAGGATGCAACGAATGATTTTGACGATGTTGGGCACAGTAGCGCTGCTAGAGCAATGATGGATGAGTTTT
ACGTAGGTGATATTGATAGCTCGACTATTCCCGCAAAAAGAAAGTACACTCCTCCAAAGCAGCCCCTATACAACCAAGACAAGACACCAGAATTCATTATCAAGGTCCTC
CAGTTTCTAGCTCCCATGGTAATCTTGGGTTTGGCTTTTGGCGTCCACCTTTATACCAAAACGACT
Protein sequenceShow/hide protein sequence
GGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTPEFIIKVL
QFLAPMVILGLAFGVHLYTKTT