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MS017583 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017583
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBSD domain-containing protein
Genome locationscaffold373:741978..745398
RNA-Seq ExpressionMS017583
SyntenyMS017583
Gene Ontology termsNA
InterPro domainsIPR005607 - BSD domain
IPR035925 - BSD domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144378.1 uncharacterized protein LOC101211516 [Cucumis sativus]5.3e-6578.24Show/hide
Query:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP
        M+ SSWFRRRLLRENGQFT      +QS  EKEE+ LGVTD LIEFVKSFTF+TFKNFPL DEGEA   D+NLSDWQERHAVLVLSKVKEISQLRYKLCP
Subjt:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP

Query:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASHLTSVGPSTP
        GHLKE+QFW IYFALVKSLV EYELRAIQLDKL+RMA+ NE+ SN+T YEVEM+ETN A H+TSV P++P
Subjt:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASHLTSVGPSTP

XP_022159088.1 uncharacterized protein LOC111025528 [Momordica charantia]2.1e-8599.4Show/hide
Query:  MNFSSWFRRRLLRENGQFTSGKQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLK
        MNFSSWFRRRLLRENGQFTSGKQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLK
Subjt:  MNFSSWFRRRLLRENGQFTSGKQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLK

Query:  ERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASHLTSVGPSTP
        ERQFWIIYF LVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASHLTSVGPSTP
Subjt:  ERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASHLTSVGPSTP

XP_022995670.1 uncharacterized protein LOC111491135 [Cucurbita maxima]2.6e-6480.12Show/hide
Query:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP
        M+ SSWFRRRLLR+  QFT G    ++S GEKEE+  GVTD LIEFVKSFT ETFKNFPL DEGEA   DQNLSDWQERHAVLVLSKVKEISQLRYKLCP
Subjt:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP

Query:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNST-TYEVEMAETNAASHLTSVGPSTP
        GHLKE QFW IYF+LVKSLVVEYELRAIQLDKLRRMA+GNE SSN T +YEVEMAETN ASHL  VGP TP
Subjt:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNST-TYEVEMAETNAASHLTSVGPSTP

XP_023533324.1 uncharacterized protein LOC111795251 [Cucurbita pepo subsp. pepo]4.5e-6480.12Show/hide
Query:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP
        M+ SSWFRRRLLR+  QFT      ++S GEKEE+  GVTD+LIEFVKSFT ETFKNFPL DEGEA   DQNLSDWQERHAVLVLSKVKEISQLRYKLCP
Subjt:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP

Query:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNST-TYEVEMAETNAASHLTSVGPSTP
        GHLKE QFW IYFALVKSLVVEYELRAIQLDKLRRMA+GNE SSN T +YEVEMAETN ASHL  VGP TP
Subjt:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNST-TYEVEMAETNAASHLTSVGPSTP

XP_038888694.1 uncharacterized protein LOC120078494 [Benincasa hispida]1.1e-6580Show/hide
Query:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP
        M+ SSW RRRLLRENGQFT      +QS  EKEE+ LGVTD LIEFVKSFTFETFKNFPL DEGEAPR D+ LSDWQERHAVLVLSKVKEISQLRYKLCP
Subjt:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP

Query:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASHLTSVGPSTP
        GHLKE+QFW IYFALVKSLV EYELRAIQLDK+RRMA+GNEESSN T YEVEM+ETN +SHLTS     P
Subjt:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASHLTSVGPSTP

TrEMBL top hitse value%identityAlignment
A0A0A0L939 BSD domain-containing protein2.6e-6578.24Show/hide
Query:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP
        M+ SSWFRRRLLRENGQFT      +QS  EKEE+ LGVTD LIEFVKSFTF+TFKNFPL DEGEA   D+NLSDWQERHAVLVLSKVKEISQLRYKLCP
Subjt:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP

Query:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASHLTSVGPSTP
        GHLKE+QFW IYFALVKSLV EYELRAIQLDKL+RMA+ NE+ SN+T YEVEM+ETN A H+TSV P++P
Subjt:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASHLTSVGPSTP

A0A1S3CNW3 uncharacterized protein LOC1035030735.4e-6380.12Show/hide
Query:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP
        M+ SSWFRRRLLRENGQFT      +QS  EKEE  LGVTD LIEFVKSFTF TFKNFPL DEGEA   D+NLSDWQERHAVLVLSKVKEISQLRYKLCP
Subjt:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP

Query:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASH
        GHLKE+QFW IYFALVKSLV EYELRAIQLDKL+RMA+GNE+ SN+T YEVEM+ETN A H
Subjt:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASH

A0A6J1DXV0 uncharacterized protein LOC1110255281.0e-8599.4Show/hide
Query:  MNFSSWFRRRLLRENGQFTSGKQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLK
        MNFSSWFRRRLLRENGQFTSGKQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLK
Subjt:  MNFSSWFRRRLLRENGQFTSGKQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLK

Query:  ERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASHLTSVGPSTP
        ERQFWIIYF LVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASHLTSVGPSTP
Subjt:  ERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASHLTSVGPSTP

A0A6J1ESK6 uncharacterized protein LOC1114373888.3e-6479.53Show/hide
Query:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP
        M+ SSWFRRRLLR+  QFT      ++S GEKEE+  GVT+ LIEFVKSFT ETFKNFPL DEGEA   DQNLSDWQERHAVLVLSKVKEISQLRYKLCP
Subjt:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP

Query:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNST-TYEVEMAETNAASHLTSVGPSTP
        GHLKE QFW IYFALVKSLVVEYELRAIQLDKLRRMA+GNE SSN T +YEVEMAETN ASHL  VGP TP
Subjt:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNST-TYEVEMAETNAASHLTSVGPSTP

A0A6J1K4L6 uncharacterized protein LOC1114911351.3e-6480.12Show/hide
Query:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP
        M+ SSWFRRRLLR+  QFT G    ++S GEKEE+  GVTD LIEFVKSFT ETFKNFPL DEGEA   DQNLSDWQERHAVLVLSKVKEISQLRYKLCP
Subjt:  MNFSSWFRRRLLRENGQFTSG----KQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCP

Query:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNST-TYEVEMAETNAASHLTSVGPSTP
        GHLKE QFW IYF+LVKSLVVEYELRAIQLDKLRRMA+GNE SSN T +YEVEMAETN ASHL  VGP TP
Subjt:  GHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNST-TYEVEMAETNAASHLTSVGPSTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26300.1 BSD domain-containing protein6.3e-2444.81Show/hide
Query:  SGKQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGE--------APRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKERQFWIIYFAL
        +G  S  E E    GVTD L EF +  T  TF+ FP  D+G+        A  V ++LSDWQERHA LVL+ VK+IS+LRY+LCP  +KER+FW IYF L
Subjt:  SGKQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGE--------APRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKERQFWIIYFAL

Query:  VKSLVVEYELRAIQLDKLRRMAVGNEESSNS-TTYEVEMAETNAASHLTSVGPS
        V + V  YE + ++  K +    GNEE+  +  T E E  E N A   TS   S
Subjt:  VKSLVVEYELRAIQLDKLRRMAVGNEESSNS-TTYEVEMAETNAASHLTSVGPS

AT1G26300.2 BSD domain-containing protein6.6e-2150.48Show/hide
Query:  SGKQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGE--------APRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKERQFWIIYFAL
        +G  S  E E    GVTD L EF +  T  TF+ FP  D+G+        A  V ++LSDWQERHA LVL+ VK+IS+LRY+LCP  +KER+FW IYF L
Subjt:  SGKQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGE--------APRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKERQFWIIYFAL

Query:  VKSLV
        V + V
Subjt:  VKSLV

AT1G69030.1 BSD domain-containing protein4.5e-2242.67Show/hide
Query:  GKQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEG--------EAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKERQFWIIYFALV
        G     E E    G+TD L EFVK  T  TF+ FP  DE          A  V ++LS+WQERHA LVL  VK+IS+LRY+LCP  +KER+FW IYF LV
Subjt:  GKQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEG--------EAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKERQFWIIYFALV

Query:  KSLVVEYELRAIQLDKLRRMAVGNEESSNST--TYEVEMAETNAASHLTS
         + V  YE +   +++LR  A   +E +  +      E AE N  S  +S
Subjt:  KSLVVEYELRAIQLDKLRRMAVGNEESSNST--TYEVEMAETNAASHLTS

AT3G24820.1 BSD domain-containing protein2.2e-3748.68Show/hide
Query:  MNFSSWFRRRLLRENGQFTSGKQSRG------EKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGE----------------APRVDQNLSDWQERHAV
        MN +S  RR  LRE  + + G   +       E ++EILGVTD LI+ V+SFT +TFKNF L DE E                +  V ++LSDWQE+HAV
Subjt:  MNFSSWFRRRLLRENGQFTSGKQSRG------EKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGE----------------APRVDQNLSDWQERHAV

Query:  LVLSKVKEISQLRYKLCPGHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNST-TYEVEMAETNAASHLTSVGPSTP
        LVLSK KE+SQLR+KLCP  LKE QFW IYF LV+ +V +YE+ AIQ  ++RRMA+ + ++S S   YEVEM+ET       S GP+TP
Subjt:  LVLSKVKEISQLRYKLCPGHLKERQFWIIYFALVKSLVVEYELRAIQLDKLRRMAVGNEESSNST-TYEVEMAETNAASHLTSVGPSTP

AT3G49800.1 BSD domain-containing protein9.8e-0933.33Show/hide
Query:  LGVTDSLIEFVKSFTF--ETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKERQFWIIYFALVKSLVVEYE
        +GVT+ ++ F +      ET+ +FP PDE +    D  ++D Q  HA+ V +    ++ LR +LCP ++ E  FW IYF LV  +  +++
Subjt:  LGVTDSLIEFVKSFTF--ETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKERQFWIIYFALVKSLVVEYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTTTCTTCTTGGTTTCGACGCAGACTTTTGAGGGAAAATGGCCAGTTCACCAGCGGCAAACAATCCCGCGGAGAGAAGGAAGAGGAAATTCTCGGAGTCACAGA
CAGTTTGATCGAATTTGTGAAGTCCTTCACCTTCGAAACCTTCAAGAACTTTCCTCTTCCGGATGAAGGGGAAGCACCTCGTGTTGACCAGAATCTCTCAGATTGGCAGG
AGCGACATGCAGTTCTTGTGCTATCAAAAGTCAAGGAAATTTCCCAACTCAGATATAAACTCTGCCCTGGACACTTGAAGGAACGCCAATTCTGGATAATATATTTTGCG
CTTGTCAAAAGCCTTGTGGTTGAATATGAACTGCGTGCAATTCAACTTGATAAACTCAGGAGGATGGCTGTAGGTAATGAGGAATCTTCCAACAGCACTACATATGAAGT
TGAAATGGCAGAGACGAATGCCGCATCACATTTAACTTCTGTAGGTCCCTCAACTCCA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTTTCTTCTTGGTTTCGACGCAGACTTTTGAGGGAAAATGGCCAGTTCACCAGCGGCAAACAATCCCGCGGAGAGAAGGAAGAGGAAATTCTCGGAGTCACAGA
CAGTTTGATCGAATTTGTGAAGTCCTTCACCTTCGAAACCTTCAAGAACTTTCCTCTTCCGGATGAAGGGGAAGCACCTCGTGTTGACCAGAATCTCTCAGATTGGCAGG
AGCGACATGCAGTTCTTGTGCTATCAAAAGTCAAGGAAATTTCCCAACTCAGATATAAACTCTGCCCTGGACACTTGAAGGAACGCCAATTCTGGATAATATATTTTGCG
CTTGTCAAAAGCCTTGTGGTTGAATATGAACTGCGTGCAATTCAACTTGATAAACTCAGGAGGATGGCTGTAGGTAATGAGGAATCTTCCAACAGCACTACATATGAAGT
TGAAATGGCAGAGACGAATGCCGCATCACATTTAACTTCTGTAGGTCCCTCAACTCCA
Protein sequenceShow/hide protein sequence
MNFSSWFRRRLLRENGQFTSGKQSRGEKEEEILGVTDSLIEFVKSFTFETFKNFPLPDEGEAPRVDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKERQFWIIYFA
LVKSLVVEYELRAIQLDKLRRMAVGNEESSNSTTYEVEMAETNAASHLTSVGPSTP