CuGenDBv2

Gene ID	MS017604
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Genome location	scaffold373:865536..866331
RNA-Seq Expression	MS017604
Synteny	MS017604
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152015.1 uncharacterized protein LOC101207451 isoform X1 [Cucumis sativus]

8.5e-45

80.3

Show/hide

Query:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR
        MASS LFHNF SIS H   RHRNP I  HSQ LP NSLKLK+QS   N QI KL  RGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGT LVPDSVPR
Subjt:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR

Query:  PIARISVAIVASTITLFLLKSVLSTALFVLVL
        PIARISV IVA TI LFL KSVLSTALFVL +
Subjt:  PIARISVAIVASTITLFLLKSVLSTALFVLVL

XP_008447333.1 PREDICTED: uncharacterized protein LOC103489804 [Cucumis melo]

8.0e-43

79.55

Show/hide

Query:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR
        MASS LFHNF SIS H   RHRNP I  HSQFLP NSLKLKKQ     SQI KL ARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGT LVP SVPR
Subjt:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR

Query:  PIARISVAIVASTITLFLLKSVLSTALFVLVL
        PIARISV IVA  I LFL KS+LSTALFVL +
Subjt:  PIARISVAIVASTITLFLLKSVLSTALFVLVL

XP_022159605.1 uncharacterized protein LOC111025970 [Momordica charantia]

1.9e-60

96.97

Show/hide

Query:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR
        MASSSLFHNFSSISPH SIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR
Subjt:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR

Query:  PIARISVAIVASTITLFLLKSVLSTALFVLVL
        PIARISVAIVASTI LFLLKSVLSTALFVL +
Subjt:  PIARISVAIVASTITLFLLKSVLSTALFVLVL

XP_023532771.1 uncharacterized protein LOC111794841 [Cucurbita pepo subsp. pepo]

3.0e-42

75.76

Show/hide

Query:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR
        MASS LFHN  SIS H   RHRN  IF HSQFLP NSLKL+KQS  SNS+I KL  R S SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGT LVP+SVPR
Subjt:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR

Query:  PIARISVAIVASTITLFLLKSVLSTALFVLVL
        P+ARISVAI A +I LFLLKSVLSTA FVL +
Subjt:  PIARISVAIVASTITLFLLKSVLSTALFVLVL

XP_038887965.1 uncharacterized protein LOC120077928 [Benincasa hispida]

9.4e-44

77.27

Show/hide

Query:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR
        MASS LFHNF SIS H   RHRN PI  HSQFLP NSLKLKKQS   N +I KL  RGSPSF LVYAAQNNFLRVFQTVWK+GKDGIEAGT L+PDSVPR
Subjt:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR

Query:  PIARISVAIVASTITLFLLKSVLSTALFVLVL
        PIARISV +VA TI LFL KS+LSTALFVL +
Subjt:  PIARISVAIVASTITLFLLKSVLSTALFVLVL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCA2 Uncharacterized protein

8.3e-46

81.82

Show/hide

Query:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR
        MASS LFHNF SIS H   RHRNP I  HSQ LP NSLKLK+QS   N QI KL  RGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGT LVPDSVPR
Subjt:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR

Query:  PIARISVAIVASTITLFLLKSVLSTALFVLVL
        PIARISV IVA TI LFL KSVLSTALFVLVL
Subjt:  PIARISVAIVASTITLFLLKSVLSTALFVLVL

A0A1S3BHT2 uncharacterized protein LOC103489804

3.9e-43

79.55

Show/hide

Query:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR
        MASS LFHNF SIS H   RHRNP I  HSQFLP NSLKLKKQ     SQI KL ARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGT LVP SVPR
Subjt:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR

Query:  PIARISVAIVASTITLFLLKSVLSTALFVLVL
        PIARISV IVA  I LFL KS+LSTALFVL +
Subjt:  PIARISVAIVASTITLFLLKSVLSTALFVLVL

A0A6J1DZ75 uncharacterized protein LOC111025970

9.2e-61

96.97

Show/hide

Query:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR
        MASSSLFHNFSSISPH SIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR
Subjt:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR

Query:  PIARISVAIVASTITLFLLKSVLSTALFVLVL
        PIARISVAIVASTI LFLLKSVLSTALFVL +
Subjt:  PIARISVAIVASTITLFLLKSVLSTALFVLVL

A0A6J1ESP6 uncharacterized protein LOC111437405

1.9e-42

75.76

Show/hide

Query:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR
        MASS LFHN  SIS H   RHRNP IF HSQFLP NSLKL+KQ    NS+I KL  RGS SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGT LVP SVPR
Subjt:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR

Query:  PIARISVAIVASTITLFLLKSVLSTALFVLVL
        P+ARISVAI A +I LFLLKSVLSTA FVL +
Subjt:  PIARISVAIVASTITLFLLKSVLSTALFVLVL

A0A6J1K1P0 uncharacterized protein LOC111491610

3.6e-41

Show/hide

Query:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR
        MASS LFHN  SIS H   RHRN  IF HSQFLP NSLKL+KQS    S+I KL  R S SFP+VYAAQNNFLRVFQTVWK+GKDGIEAGT LVPDSVPR
Subjt:  MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR

Query:  PIARISVAIVASTITLFLLKSVLSTALFVLVL
        P+ARISVAI A +I LFLLKSVLSTA FVL +
Subjt:  PIARISVAIVASTITLFLLKSVLSTALFVLVL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G13220.1 unknown protein

5.4e-21

51.54

Show/hide

Query:  SSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNS-LKLKKQSLFS-NSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR
        +SSL  N S ++P      +    FP+S FL P S LKLK  SL +  ++I  L  +   S  LV +AQ++FL+V +T W IGKDGIEAGT LVP SVPR
Subjt:  SSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNS-LKLKKQSLFS-NSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPR

Query:  PIARISVAIVASTITLFLLKSVLSTALFVL
        P+ARISV I A  ++LF++KS LSTA FVL
Subjt:  PIARISVAIVASTITLFLLKSVLSTALFVL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCTTCATCTCTATTTCACAATTTTTCTTCCATTTCTCCACACCTTTCAATCCGCCATAGAAACCCACCCATTTTTCCCCATTCCCAGTTCCTCCCTCCCAACTC
CTTGAAACTCAAAAAACAATCTCTCTTCTCAAATTCGCAAATTCGGAAGCTAACAGCTCGAGGGTCTCCTTCTTTCCCTCTTGTATATGCTGCACAGAACAATTTCTTGA
GAGTCTTTCAGACAGTTTGGAAGATTGGTAAGGATGGAATTGAGGCAGGAACAGGCCTGGTACCTGATTCTGTACCAAGGCCTATAGCAAGGATATCTGTAGCAATAGTT
GCATCAACTATTACACTTTTTTTGCTCAAGTCAGTCCTGTCTACGGCCTTGTTTGTGCTGGTATTGCAATACTCTTAC

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASSSLFHNFSSISPHLSIRHRNPPIFPHSQFLPPNSLKLKKQSLFSNSQIRKLTARGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTGLVPDSVPRPIARISVAIV
ASTITLFLLKSVLSTALFVLVLQYSY

MS017604 (gene) of Bitter gourd (TR) v1 genome