; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017606 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017606
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold373:877228..877671
RNA-Seq ExpressionMS017606
SyntenyMS017606
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052584.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]3.9e-2743.15Show/hide
Query:  LKYCMALLLVVTLLSV--DPCFGSL----PFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDV
        +KYC  +  VV ++++  + C G      PF +W V V N +  G++L +HCKS+DNDLG H+L VG+KF+W FK NLFS+T FWC +     + V++DV
Subjt:  LKYCMALLLVVTLLSV--DPCFGSL----PFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDV

Query:  FNARDDGFLYGKCWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKWE
        F      +L  +C  +Y  CIW  +DDGIYI+N      EFV KW+
Subjt:  FNARDDGFLYGKCWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKWE

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]1.9e-2640.14Show/hide
Query:  TLKYCMALLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARD
        T K+ +  LLV++L+ ++P       + W + V N +  G+TLF+HCKS+DNDLG HNL  G +F W F+VNL+++TLFWCY+    G+  S DVF    
Subjt:  TLKYCMALLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARD

Query:  DG-FLYGKCWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKWE
           +L+ +C+  + NCIW+ +DDGIY+ +   ++   V +W+
Subjt:  DG-FLYGKCWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKWE

XP_022143780.1 S-protein homolog 1-like [Momordica charantia]1.9e-2641.79Show/hide
Query:  LLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDG-FLYG
        + L V+ L++     ++P   W + V N++   + LF+HCKS+++DLG HNL VG +F W F+VN++ +TL+WCY++   G+ VS D F    D  +LY 
Subjt:  LLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDG-FLYG

Query:  KCWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKW
        KC E   NC W  +DDGIY+ N  D +  FV KW
Subjt:  KCWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKW

XP_022931006.1 S-protein homolog 1-like [Cucurbita moschata]5.5e-2946.53Show/hide
Query:  TLKYCMALLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARD
        T++ C+ALLLV+  +  + CF +  F+AW ++V NDM  G TL +HCKS+D+DLGR  L VG    W F+ N++ +TLFWC +    G H +L+VFN+RD
Subjt:  TLKYCMALLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARD

Query:  DGFLYGKCWEDYHN--CIWSVRDDGIYIMN-TWDEKFEFVAKWE
           LY +C    H   CIWS+RDDGIY+ N + +  +E +AKWE
Subjt:  DGFLYGKCWEDYHN--CIWSVRDDGIYIMN-TWDEKFEFVAKWE

XP_023532937.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]1.6e-2845.77Show/hide
Query:  TLKYCMALLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARD
        T++ C+ALLL +  +  + CF +  F+AW ++V NDM  G TL +HCKS+D+DLGR  L VG    W F+ N++ +TLFWC +    G H +L+VFN+RD
Subjt:  TLKYCMALLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARD

Query:  DGFLYGKCWEDYHNCIWSVRDDGIYIMN-TWDEKFEFVAKWE
           LY +C    + CIWS+RDDGIY+ N + +  +E +AKWE
Subjt:  DGFLYGKCWEDYHNCIWSVRDDGIYIMN-TWDEKFEFVAKWE

TrEMBL top hitse value%identityAlignment
A0A1S4DWP0 S-protein homolog2.1e-2650.38Show/hide
Query:  MAITLKYCMALLLVVTLLSV--DPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDV
        M  + K C+  +LV+  L++   PCF +  F  WTV+V NDMK G  L +HCKS+D+DLG   L V  +FTW+F+ NL+SSTLFWCY+R+Q   HVSL+V
Subjt:  MAITLKYCMALLLVVTLLSV--DPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDV

Query:  FNARDDGFLYGKCWEDYHNCIWSVRDDGIYI
        FNA +   LY +C      CIWS+R+DGIY+
Subjt:  FNARDDGFLYGKCWEDYHNCIWSVRDDGIYI

A0A5A7UB41 S-protein homolog1.9e-2743.15Show/hide
Query:  LKYCMALLLVVTLLSV--DPCFGSL----PFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDV
        +KYC  +  VV ++++  + C G      PF +W V V N +  G++L +HCKS+DNDLG H+L VG+KF+W FK NLFS+T FWC +     + V++DV
Subjt:  LKYCMALLLVVTLLSV--DPCFGSL----PFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDV

Query:  FNARDDGFLYGKCWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKWE
        F      +L  +C  +Y  CIW  +DDGIYI+N      EFV KW+
Subjt:  FNARDDGFLYGKCWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKWE

A0A6J1CPR8 S-protein homolog9.4e-2741.79Show/hide
Query:  LLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDG-FLYG
        + L V+ L++     ++P   W + V N++   + LF+HCKS+++DLG HNL VG +F W F+VN++ +TL+WCY++   G+ VS D F    D  +LY 
Subjt:  LLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDG-FLYG

Query:  KCWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKW
        KC E   NC W  +DDGIY+ N  D +  FV KW
Subjt:  KCWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKW

A0A6J1CRU0 S-protein homolog9.4e-2740.14Show/hide
Query:  TLKYCMALLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARD
        T K+ +  LLV++L+ ++P       + W + V N +  G+TLF+HCKS+DNDLG HNL  G +F W F+VNL+++TLFWCY+    G+  S DVF    
Subjt:  TLKYCMALLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARD

Query:  DG-FLYGKCWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKWE
           +L+ +C+  + NCIW+ +DDGIY+ +   ++   V +W+
Subjt:  DG-FLYGKCWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKWE

A0A6J1ESI0 S-protein homolog2.6e-2946.53Show/hide
Query:  TLKYCMALLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARD
        T++ C+ALLLV+  +  + CF +  F+AW ++V NDM  G TL +HCKS+D+DLGR  L VG    W F+ N++ +TLFWC +    G H +L+VFN+RD
Subjt:  TLKYCMALLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARD

Query:  DGFLYGKCWEDYHN--CIWSVRDDGIYIMN-TWDEKFEFVAKWE
           LY +C    H   CIWS+RDDGIY+ N + +  +E +AKWE
Subjt:  DGFLYGKCWEDYHN--CIWSVRDDGIYIMN-TWDEKFEFVAKWE

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 69.1e-1133.64Show/hide
Query:  VQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGIYIMNTW
        V ++ND      L +HCKSRD+D G H L  G  + W F VN  +STL++C    ++ +    D++ A  D     +C     NC W  ++DGIY     
Subjt:  VQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGIYIMNTW

Query:  DEKFEFVAKW
         +K     KW
Subjt:  DEKFEFVAKW

F4JLQ5 S-protein homolog 22.8e-1231.03Show/hide
Query:  PFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGI
        P    TV+++ND+    TL  HCKS+D+DLG   L  G+ ++++F    F  TL++C        H S D++    D     KC  D   C+W +R +G 
Subjt:  PFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGI

Query:  YIMNTWDEKFEFVAKW
           N   ++F+    W
Subjt:  YIMNTWDEKFEFVAKW

F4JLS0 S-protein homolog 13.0e-2242.48Show/hide
Query:  WTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGIYIMN
        W V V N +  G TLF+HCKS+++DLG  NL    +F+WNF  N+  ST FWCYM    G H++++VF   DD  L+ +C   + NCIW+ + DG+Y+ N
Subjt:  WTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGIYIMN

Query:  TWDEKFEFVAKWE
        +   +     KWE
Subjt:  TWDEKFEFVAKWE

P0DN93 S-protein homolog 291.4e-1129.32Show/hide
Query:  LLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGK
        +L ++    +  C G  PF    V V N++    TL + C+S+D+DLG H L  G+ F W F+ + F +TLF C               + RD G  Y  
Subjt:  LLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGK

Query:  CWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKW
              +C WS+  D   I   +++KF+    W
Subjt:  CWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKW

Q2HQ46 S-protein homolog 741.4e-2242.98Show/hide
Query:  WTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGIYIMN
        W V V N +  G TLF+HCKS++NDLG  NL    +F+WNF  N+  STLFWCYM    G H+++ VF   DD  L+ +C  D+ NC+W+ ++DG+Y+ N
Subjt:  WTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGIYIMN

Query:  TWDEKFEFVAKWEA
        +   +     KW++
Subjt:  TWDEKFEFVAKWEA

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family4.6e-1031.25Show/hide
Query:  LKYCMALLLVVTLLSVDPCFGSLPFEAWTVQVHNDM--KRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWC--YMRDQRGRHVSLDVFN
        +K     L VV L  +   +G    +  T+ V N++  K    L +HCKS++ND+G   L +G+  +++FK N + +T FWC  Y      R+  +  + 
Subjt:  LKYCMALLLVVTLLSVDPCFGSLPFEAWTVQVHNDM--KRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWC--YMRDQRGRHVSLDVFN

Query:  ARDDGFLYGKCWEDYHNCIWSVRDDGIY
        A     L+ K    Y+   W  RDDGIY
Subjt:  ARDDGFLYGKCWEDYHNCIWSVRDDGIY

AT4G16195.1 Plant self-incompatibility protein S1 family2.0e-1331.03Show/hide
Query:  PFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGI
        P    TV+++ND+    TL  HCKS+D+DLG   L  G+ ++++F    F  TL++C        H S D++    D     KC  D   C+W +R +G 
Subjt:  PFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGI

Query:  YIMNTWDEKFEFVAKW
           N   ++F+    W
Subjt:  YIMNTWDEKFEFVAKW

AT4G16295.1 S-protein homologue 12.1e-2342.48Show/hide
Query:  WTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGIYIMN
        W V V N +  G TLF+HCKS+++DLG  NL    +F+WNF  N+  ST FWCYM    G H++++VF   DD  L+ +C   + NCIW+ + DG+Y+ N
Subjt:  WTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGIYIMN

Query:  TWDEKFEFVAKWE
        +   +     KWE
Subjt:  TWDEKFEFVAKWE

AT4G29035.1 Plant self-incompatibility protein S1 family9.6e-2442.98Show/hide
Query:  WTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGIYIMN
        W V V N +  G TLF+HCKS++NDLG  NL    +F+WNF  N+  STLFWCYM    G H+++ VF   DD  L+ +C  D+ NC+W+ ++DG+Y+ N
Subjt:  WTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGIYIMN

Query:  TWDEKFEFVAKWEA
        +   +     KW++
Subjt:  TWDEKFEFVAKWEA

AT5G06020.1 Plant self-incompatibility protein S1 family7.2e-1130.17Show/hide
Query:  PFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGI
        P    TV+ +ND   G    +HCKS+D+DLG H    G+ + W F VN  +STL++C     +      D+  A  D   + +C     NC W+ + D +
Subjt:  PFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFLYGKCWEDYHNCIWSVRDDGI

Query:  YIMNTWDEKFEFVAKW
        Y  +   +   +  KW
Subjt:  YIMNTWDEKFEFVAKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGAGAGAAATGGCGATTACTTTGAAATATTGTATGGCTTTACTTTTGGTCGTGACATTGCTAAGCGTTGATCCATGCTTTGGGTCACTTCCCTTCGAAGCTTGGACAGT
GCAAGTACACAACGACATGAAACGGGGACGAACATTATTTCTTCACTGCAAATCTAGAGACAACGATTTGGGACGACATAATCTCGGAGTCGGGAAAAAGTTTACATGGA
ATTTTAAGGTAAATCTATTTTCGTCGACACTATTTTGGTGCTACATGCGCGATCAACGCGGTCGACATGTTTCTTTAGATGTGTTTAATGCAAGAGATGACGGTTTCCTG
TACGGCAAATGTTGGGAGGATTATCACAACTGCATCTGGTCTGTAAGAGACGATGGAATCTATATAATGAATACTTGGGACGAGAAGTTTGAATTTGTAGCAAAATGGGA
GGCT
mRNA sequenceShow/hide mRNA sequence
TCGAGAGAAATGGCGATTACTTTGAAATATTGTATGGCTTTACTTTTGGTCGTGACATTGCTAAGCGTTGATCCATGCTTTGGGTCACTTCCCTTCGAAGCTTGGACAGT
GCAAGTACACAACGACATGAAACGGGGACGAACATTATTTCTTCACTGCAAATCTAGAGACAACGATTTGGGACGACATAATCTCGGAGTCGGGAAAAAGTTTACATGGA
ATTTTAAGGTAAATCTATTTTCGTCGACACTATTTTGGTGCTACATGCGCGATCAACGCGGTCGACATGTTTCTTTAGATGTGTTTAATGCAAGAGATGACGGTTTCCTG
TACGGCAAATGTTGGGAGGATTATCACAACTGCATCTGGTCTGTAAGAGACGATGGAATCTATATAATGAATACTTGGGACGAGAAGTTTGAATTTGTAGCAAAATGGGA
GGCT
Protein sequenceShow/hide protein sequence
SREMAITLKYCMALLLVVTLLSVDPCFGSLPFEAWTVQVHNDMKRGRTLFLHCKSRDNDLGRHNLGVGKKFTWNFKVNLFSSTLFWCYMRDQRGRHVSLDVFNARDDGFL
YGKCWEDYHNCIWSVRDDGIYIMNTWDEKFEFVAKWEA