; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017607 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017607
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold373:882819..883271
RNA-Seq ExpressionMS017607
SyntenyMS017607
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651473.1 hypothetical protein Csa_001696 [Cucumis sativus]4.0e-2742.86Show/hide
Query:  LKYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKD-
        +K  M  L V++ + +      +PF+ W VKVVN+M  GG L+L C+S D+DLG HNLR G+ F W+FR NISS+T+FWCYMR+K+G  ++ +VF   + 
Subjt:  LKYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKD-

Query:  DDLLYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKW
           + Y+C   + C+WSVRD G Y+++D ++  F  + +W
Subjt:  DDLLYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKW

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]2.6e-2644.09Show/hide
Query:  KYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDD
        K+ +  LLV+ LV +EP       + W++ VVN +++G TLF+HCKSKD+DLG+HNL  G  F W FR+N+ ++TLFWCY+    G+  S DVF  +   
Subjt:  KYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDD

Query:  L-LYYKCWEGRVCIWSVRDGGIYVRND
        + L+Y+C+    CIW+ +D GIY+R++
Subjt:  L-LYYKCWEGRVCIWSVRDGGIYVRND

XP_022143780.1 S-protein homolog 1-like [Momordica charantia]5.2e-2745.32Show/hide
Query:  KYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDD
        K+ +  L V  L  VE     +P   W++ V N +++   LF+HCKSK+DDLG+HNL VG  F WRFR+NI  +TL+WCY++  +G+ VS D F  + D 
Subjt:  KYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDD

Query:  L-LYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKW
        + LYYKC E   C W  +D GIY+RN+  D +  FV KW
Subjt:  L-LYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKW

XP_022931006.1 S-protein homolog 1-like [Cucurbita moschata]8.3e-3349.29Show/hide
Query:  LKYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDD
        ++ C+ALLLV+  V  E CF    F+ W ++V N+M+ G TL +HCKSKDDDLG+  L+VG    W FR N+  +TLFWC + + HG H +L+VFN++ D
Subjt:  LKYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDD

Query:  DLLYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKWE
         +LY++C  G VCIWS+RD GIYVRN   ++ ++ +AKWE
Subjt:  DLLYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKWE

XP_023532937.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]9.2e-3248.57Show/hide
Query:  LKYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDD
        ++ C+ALLL +  V  E CF    F+ W ++V N+M+ G TL +HCKSKDDDLG+  L+VG    W FR NI  +TLFWC + + +G H +L+VFN++ D
Subjt:  LKYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDD

Query:  DLLYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKWE
         +LY++C  G VCIWS+RD GIYVRN   ++ ++ +AKWE
Subjt:  DLLYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKWE

TrEMBL top hitse value%identityAlignment
A0A1S4DWP0 S-protein homolog2.4e-2550.79Show/hide
Query:  KYCMALLLVVVLVRV--EPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKD
        K C+  +LV++ + +  +PCF    F  W V+V N+M +G  L +HCKSKDDDLG   L V   FTW FR N+ SSTLFWCY+RN+   HVSL+VFNA +
Subjt:  KYCMALLLVVVLVRV--EPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKD

Query:  DDLLYYKCWEGRVCIWSVRDGGIYVR
         + LYY+C +   CIWS+R+ GIYV+
Subjt:  DDLLYYKCWEGRVCIWSVRDGGIYVR

A0A5A7UB41 S-protein homolog4.0e-2541.22Show/hide
Query:  IILKYCMALLLVVVLVRV--EPCFGGI----PFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSL
        + +KYC  +  VVV++ +  E C GG     PF  W+V V N ++ G +L +HCKSKD+DLG+H+LRVG+ F+W+F+ N+ S+T FWC + +   + V++
Subjt:  IILKYCMALLLVVVLVRV--EPCFGGI----PFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSL

Query:  DVFNAKDDDLLYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKWE
        DVF  +  D L Y+C     CIW  +D GIY+ N  + +  +FV KW+
Subjt:  DVFNAKDDDLLYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKWE

A0A6J1CPR8 S-protein homolog2.5e-2745.32Show/hide
Query:  KYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDD
        K+ +  L V  L  VE     +P   W++ V N +++   LF+HCKSK+DDLG+HNL VG  F WRFR+NI  +TL+WCY++  +G+ VS D F  + D 
Subjt:  KYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDD

Query:  L-LYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKW
        + LYYKC E   C W  +D GIY+RN+  D +  FV KW
Subjt:  L-LYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKW

A0A6J1CRU0 S-protein homolog1.3e-2644.09Show/hide
Query:  KYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDD
        K+ +  LLV+ LV +EP       + W++ VVN +++G TLF+HCKSKD+DLG+HNL  G  F W FR+N+ ++TLFWCY+    G+  S DVF  +   
Subjt:  KYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDD

Query:  L-LYYKCWEGRVCIWSVRDGGIYVRND
        + L+Y+C+    CIW+ +D GIY+R++
Subjt:  L-LYYKCWEGRVCIWSVRDGGIYVRND

A0A6J1ESI0 S-protein homolog4.0e-3349.29Show/hide
Query:  LKYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDD
        ++ C+ALLLV+  V  E CF    F+ W ++V N+M+ G TL +HCKSKDDDLG+  L+VG    W FR N+  +TLFWC + + HG H +L+VFN++ D
Subjt:  LKYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDD

Query:  DLLYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKWE
         +LY++C  G VCIWS+RD GIYVRN   ++ ++ +AKWE
Subjt:  DLLYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKWE

SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 11.6e-2346.15Show/hide
Query:  WEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKC-WEGRVCIWSVRDGGIYVRN
        W+V VVN +T+G TLF+HCKSK+DDLG+ NL+    F+W F  N+  ST FWCYM NK   H++++VF   DD +L+++C W+   CIW+ +  G+Y+  
Subjt:  WEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKC-WEGRVCIWSVRDGGIYVRN

Query:  DWNDDKFDFV--AKWEV
         WN    + V   KWEV
Subjt:  DWNDDKFDFV--AKWEV

P0DN92 S-protein homolog 246.0e-1036.59Show/hide
Query:  LFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKCWEGRVCIWSVRDGGIY
        L +HCKS+DDDLG H L  G+ F W+F +N   STL++C       +    +++ A  D   +Y+C     C W     GIY
Subjt:  LFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKCWEGRVCIWSVRDGGIY

P0DN93 S-protein homolog 294.2e-1131.34Show/hide
Query:  LLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWC-YMRNKHGRHVSLDVFNAKDDDLLYY
        +L +++   +  C G  PF    V V NN++   TL + C+SKDDDLG+H L  G+ F W+FR +   +TLF C ++ N + +    D + +  D    Y
Subjt:  LLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWC-YMRNKHGRHVSLDVFNAKDDDLLYY

Query:  KCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKW
               C WS+      +  ++N  KFD    W
Subjt:  KCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKW

Q2HQ46 S-protein homolog 749.9e-2144.44Show/hide
Query:  WEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKCWEGRVCIWSVRDGGIYVRN
        W+V V N +T+G TLF+HCKSK++DLG  NL+    F+W F  N+  STLFWCYM    G H+++ VF   DD +L+++C + + C+W+ ++ G+Y+ N
Subjt:  WEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKCWEGRVCIWSVRDGGIYVRN

Q9FI84 S-protein homolog 276.0e-1035.37Show/hide
Query:  LFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKCWEGRVCIWSVRDGGIY
        L +HCKSKDDDLG H  + G+ + W+F +N  +STL++C            D+  A+ D   +Y+C   R C W+ +   +Y
Subjt:  LFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKCWEGRVCIWSVRDGGIY

Arabidopsis top hitse value%identityAlignment
AT1G26796.1 Plant self-incompatibility protein S1 family1.9e-1133.64Show/hide
Query:  GGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKCWEGRVCIWSV---
        G + F P  V ++N + +  TL +HC++K DDLG  +L+    F +RFR+N+  +T + C      G   + D+F A  DD    K      CIWS+   
Subjt:  GGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKCWEGRVCIWSV---

Query:  ------RDGG
              RDGG
Subjt:  ------RDGG

AT1G26797.1 Plant self-incompatibility protein S1 family1.7e-1229.51Show/hide
Query:  LLLVVVLVRVEPCF-------GGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKD
        L+ V+V+ +    F       G  PF P  V ++N +   G L++HC++K +DLG H +   +   +RFR+N+  +T + C   +  G   + D+F A  
Subjt:  LLLVVVLVRVEPCF-------GGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKD

Query:  DDLLYYKCWEGRVCIWSVRDGG
        DD         R CIW + + G
Subjt:  DDLLYYKCWEGRVCIWSVRDGG

AT1G26799.1 Plant self-incompatibility protein S1 family8.6e-1233.05Show/hide
Query:  GGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKCWEGRVCIWSV---
        G + F P  V + N +TS  TL +HC +K+ DLG   L +G  F +RFR+N+  +T + C      G     D+F A  DD         R CIW +   
Subjt:  GGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKCWEGRVCIWSV---

Query:  ------RDGGIYVRNDWN
              RDGG  +   W+
Subjt:  ------RDGGIYVRNDWN

AT4G16295.1 S-protein homologue 11.2e-2446.15Show/hide
Query:  WEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKC-WEGRVCIWSVRDGGIYVRN
        W+V VVN +T+G TLF+HCKSK+DDLG+ NL+    F+W F  N+  ST FWCYM NK   H++++VF   DD +L+++C W+   CIW+ +  G+Y+  
Subjt:  WEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKC-WEGRVCIWSVRDGGIYVRN

Query:  DWNDDKFDFV--AKWEV
         WN    + V   KWEV
Subjt:  DWNDDKFDFV--AKWEV

AT4G29035.1 Plant self-incompatibility protein S1 family7.0e-2244.44Show/hide
Query:  WEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKCWEGRVCIWSVRDGGIYVRN
        W+V V N +T+G TLF+HCKSK++DLG  NL+    F+W F  N+  STLFWCYM    G H+++ VF   DD +L+++C + + C+W+ ++ G+Y+ N
Subjt:  WEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDDDLLYYKCWEGRVCIWSVRDGGIYVRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGTTGTCTGTCGAGAAATGACGATTATTTTGAAATATTGTATGGCTTTACTTTTGGTTGTAGTATTGGTGAGGGTTGAACCGTGCTTTGGGGGAATTCCCTTTGAACC
TTGGGAAGTGAAAGTAGTTAACAACATGACAAGTGGAGGTACGTTATTTCTTCACTGCAAATCCAAAGACGATGATTTGGGACAACATAATCTCCGAGTTGGGAAATATT
TTACATGGAGATTTAGGATAAATATATCATCGTCCACACTGTTTTGGTGCTACATGCGAAATAAACATGGTCGACATGTCTCTTTAGATGTGTTTAACGCAAAAGATGAT
GATTTGTTGTACTACAAATGTTGGGAGGGTCGCGTCTGCATTTGGTCTGTAAGAGATGGTGGAATCTATGTGAGAAATGATTGGAACGATGATAAGTTTGATTTTGTAGC
TAAATGGGAGGTT
mRNA sequenceShow/hide mRNA sequence
AAAGTTGTCTGTCGAGAAATGACGATTATTTTGAAATATTGTATGGCTTTACTTTTGGTTGTAGTATTGGTGAGGGTTGAACCGTGCTTTGGGGGAATTCCCTTTGAACC
TTGGGAAGTGAAAGTAGTTAACAACATGACAAGTGGAGGTACGTTATTTCTTCACTGCAAATCCAAAGACGATGATTTGGGACAACATAATCTCCGAGTTGGGAAATATT
TTACATGGAGATTTAGGATAAATATATCATCGTCCACACTGTTTTGGTGCTACATGCGAAATAAACATGGTCGACATGTCTCTTTAGATGTGTTTAACGCAAAAGATGAT
GATTTGTTGTACTACAAATGTTGGGAGGGTCGCGTCTGCATTTGGTCTGTAAGAGATGGTGGAATCTATGTGAGAAATGATTGGAACGATGATAAGTTTGATTTTGTAGC
TAAATGGGAGGTT
Protein sequenceShow/hide protein sequence
KVVCREMTIILKYCMALLLVVVLVRVEPCFGGIPFEPWEVKVVNNMTSGGTLFLHCKSKDDDLGQHNLRVGKYFTWRFRINISSSTLFWCYMRNKHGRHVSLDVFNAKDD
DLLYYKCWEGRVCIWSVRDGGIYVRNDWNDDKFDFVAKWEV