; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017611 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017611
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontetraspanin-20
Genome locationscaffold373:920406..923105
RNA-Seq ExpressionMS017611
SyntenyMS017611
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571566.1 Tetraspanin-18, partial [Cucurbita argyrosperma subsp. sororia]4.1e-12383.57Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPP-PVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAA-----FGTEFEPDL
        MARTCCHVSLAF++KCFNFLQAFVG+SIIVYSAWMLDRW+H  +PVSPPP P+PALAPSP    S Y +SE + VADR   +NLAA     F TE E DL
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPP-PVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAA-----FGTEFEPDL

Query:  NAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIV
        NAFKLPAPWFIYSFMGLGI LCCI LVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFI IDR WEKDLP DPTGELE LRQFIEDN+DLCKWIGIIV
Subjt:  NAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIV

Query:  ISTQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS
        ISTQALSLLLAIILRSMVSTRKTEYD EE+   RDRTREPLLNPP NQASG HFDLWGARMREKYGLNNSDRYNSSNQ S
Subjt:  ISTQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS

XP_004152011.1 tetraspanin-18 [Cucumis sativus]5.4e-12382.92Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSP-VSSFSLYFNSEPIRVADRFAAMNLAA-FGTEFEP-----D
        MARTCCHVSLAF+LKCFNFLQAFVG+SIIVYSAWMLDRW+H  VPVSPPPPVPALAPSP  SS S Y NSE + VADR  AM+LAA F  EF+      +
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSP-VSSFSLYFNSEPIRVADRFAAMNLAA-FGTEFEP-----D

Query:  LNAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGII
        LNAFKLPAPWFIYSFMG G+ LCCITLVGCIAAEAISGCCLCFYNMLIMLFI+VEV LVAFIAIDR WEKDLP DPTGEL+ LR FIEDN++L KWIGI+
Subjt:  LNAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGII

Query:  VISTQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS
        VISTQALSLLLAIILRSMVSTRKTEYD EE+   RDRTREPLLNPPANQA+G HFDLWGARMREKYGLNNSDRYNSSNQSS
Subjt:  VISTQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS

XP_022159701.1 tetraspanin-20 [Momordica charantia]5.2e-15098.91Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAAFGTEFEPDLNAFKLP
        MARTCCHVSLAFVLKCFNFLQAF  ISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAAFGTEFEPDLNAFKLP
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAAFGTEFEPDLNAFKLP

Query:  APWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQAL
        APWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIML ILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQAL
Subjt:  APWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQAL

Query:  SLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS
        SLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS
Subjt:  SLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS

XP_022967314.1 tetraspanin-20-like [Cucurbita maxima]1.6e-12283.21Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPP-PVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAA-----FGTEFEPDL
        MARTCCHVSLAF++KCFNFLQAFVG+SIIVYSAWMLDRW+H  +PVSPPP P+PALAPSP    S Y +SE + VADR   +NLAA     F TE E DL
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPP-PVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAA-----FGTEFEPDL

Query:  NAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIV
        NAFKLPAPWFIYSFMGLGI LCCI LVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFI IDR WEKDLP DPTGELE LRQFIEDN+DLCKWIGI V
Subjt:  NAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIV

Query:  ISTQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS
        ISTQALSLLLAIILRSMVSTRKTEYD EE+   RDRTREPLLNPP NQASG HFDLWGARMREKYGLNNSDRYNSSNQ S
Subjt:  ISTQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS

XP_038888178.1 tetraspanin-20 [Benincasa hispida]8.1e-12784.23Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAA-----FGTEFEPDLN
        M RTCCHVSLAF+LKCF+FLQAFVG+SIIVYSAWMLDRW+H  VPVSPPPP+P LAPSP  S S Y NSE + V DR  AMNLA      F TE E DLN
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAA-----FGTEFEPDLN

Query:  AFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVI
        AFKLPAPWFIYSFMG GI LCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDR WEKDLP DPTGEL+GL QFIEDN+DLCKWIGI+VI
Subjt:  AFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVI

Query:  STQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS
        STQALSLLLAIILRSMVSTRKTEYD EE+   +DRTREPLLNPPANQASG HFDLWGARMREKYGLNNSDRYNSSNQSS
Subjt:  STQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS

TrEMBL top hitse value%identityAlignment
A0A0A0L8P5 Uncharacterized protein2.6e-12382.92Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSP-VSSFSLYFNSEPIRVADRFAAMNLAA-FGTEFEP-----D
        MARTCCHVSLAF+LKCFNFLQAFVG+SIIVYSAWMLDRW+H  VPVSPPPPVPALAPSP  SS S Y NSE + VADR  AM+LAA F  EF+      +
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSP-VSSFSLYFNSEPIRVADRFAAMNLAA-FGTEFEP-----D

Query:  LNAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGII
        LNAFKLPAPWFIYSFMG G+ LCCITLVGCIAAEAISGCCLCFYNMLIMLFI+VEV LVAFIAIDR WEKDLP DPTGEL+ LR FIEDN++L KWIGI+
Subjt:  LNAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGII

Query:  VISTQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS
        VISTQALSLLLAIILRSMVSTRKTEYD EE+   RDRTREPLLNPPANQA+G HFDLWGARMREKYGLNNSDRYNSSNQSS
Subjt:  VISTQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS

A0A1S3BH71 tetraspanin-183.8e-12282.21Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSP-VSSFSLYFNSEPIRVADRFAAMNLAA-FGTEF-----EPD
        M RTCCHVSLAF+LKCFNFLQAFVG+SIIVYSAWMLDRW+H  VPVSPPPPVPALAPSP  SS S Y NSE + VADR  AM++AA F  EF     + +
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSP-VSSFSLYFNSEPIRVADRFAAMNLAA-FGTEF-----EPD

Query:  LNAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGII
        LNAFKLPAPWFIYSFMG G+ LCCITLVGCIAAEAISGCCLCFYNMLIMLFI+VEVALVAFIAIDR WEKDLP DPTGEL+ LRQFIEDN++L KWIGI+
Subjt:  LNAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGII

Query:  VISTQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS
        VISTQALSLLLAIILRSMVSTRKTEYD EE+   RDRTREPLLNPPANQA+G HFDLWGARMREKYG NNSDRYNSSNQS+
Subjt:  VISTQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS

A0A6J1E4Q2 tetraspanin-202.5e-15098.91Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAAFGTEFEPDLNAFKLP
        MARTCCHVSLAFVLKCFNFLQAF  ISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAAFGTEFEPDLNAFKLP
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAAFGTEFEPDLNAFKLP

Query:  APWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQAL
        APWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIML ILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQAL
Subjt:  APWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQAL

Query:  SLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS
        SLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS
Subjt:  SLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS

A0A6J1HHZ4 tetraspanin-20-like2.9e-12282.86Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPP-PVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAA-----FGTEFEPDL
        MARTCCHVSLAF++KCFNFLQAFVG+SIIVYSAWMLDRW+H  +PVSPPP P+PALAPSP    S Y +SE + VADR   +NLAA     F TE E DL
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPP-PVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAA-----FGTEFEPDL

Query:  NAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIV
        NAFKLPAPWFIYSFMGLGI LCCI LVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFI IDR WEKDLP DPTGEL+ LRQFIEDN+D+CKWIGIIV
Subjt:  NAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIV

Query:  ISTQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS
        ISTQALSLLLAIILRSMVSTRKTEYD EE+   RDRTREPLLNPP NQASG HFDLWGARMREKYGLNNSDRYNSSNQ S
Subjt:  ISTQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS

A0A6J1HWE7 tetraspanin-20-like7.6e-12383.21Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPP-PVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAA-----FGTEFEPDL
        MARTCCHVSLAF++KCFNFLQAFVG+SIIVYSAWMLDRW+H  +PVSPPP P+PALAPSP    S Y +SE + VADR   +NLAA     F TE E DL
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPP-PVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAA-----FGTEFEPDL

Query:  NAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIV
        NAFKLPAPWFIYSFMGLGI LCCI LVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFI IDR WEKDLP DPTGELE LRQFIEDN+DLCKWIGI V
Subjt:  NAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIV

Query:  ISTQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS
        ISTQALSLLLAIILRSMVSTRKTEYD EE+   RDRTREPLLNPP NQASG HFDLWGARMREKYGLNNSDRYNSSNQ S
Subjt:  ISTQALSLLLAIILRSMVSTRKTEYDAEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS

SwissProt top hitse value%identityAlignment
Q93XY5 Tetraspanin-181.5e-7254.04Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIR-VADRFAAMNLAAFGTEFEPDLNAFKL
        M R CCHVS A  LK  NF+QAF+G+SII+YS WML  +S R +PV PPP   + + + +++      SEP++   D  A++ L + G +   +L +  L
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIR-VADRFAAMNLAAFGTEFEPDLNAFKL

Query:  PAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQA
        PAPWFIYSFM +GI +C +T +G IAAEAI+GCCLCFY++L  L IL+E ALVA+IAIDR WEKDLP+DPTGEL  LR FIE+N+D+CKW+GI V++ Q 
Subjt:  PAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQA

Query:  LSLLLAIILRSMVSTRKTEYDAEEDTDG-RDRTREPLLNPPANQ--ASGTHFDLWGARMREKYGLNNSDRYN
        LSLLLA++LR+MVST K E D EED +  R RT +PLL P  NQ  A  +  + W +R+REKYGLN S   N
Subjt:  LSLLLAIILRSMVSTRKTEYDAEEDTDG-RDRTREPLLNPPANQ--ASGTHFDLWGARMREKYGLNNSDRYN

Q940P5 Tetraspanin-194.4e-2732.14Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAAFGTEFEPDLNAFKLP
        + R+C    L  +LK  N L   VGI++I+Y+ W++ +W  +                          + P   +D                       P
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAAFGTEFEPDLNAFKLP

Query:  APWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQAL
         PWFIYSF+GLG  LC +T  G IAAE ++GCCL  Y   I+L  +VE  +VA I ++R W+KD P DP+G      +FIE N  +CKWIG+ ++  Q L
Subjt:  APWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQAL

Query:  SLLLAIILRSMVSTRKTEYDAEED
        S+L+A++L+++       YD++++
Subjt:  SLLLAIILRSMVSTRKTEYDAEED

Q9C5W7 Tobamovirus multiplication protein 2A1.4e-2529.86Show/hide
Query:  CHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAAFGTEFEPDLNAFKLPAPWFI
        C   L  +LK  NFL A  G+ +I Y  ++   +                      +F L    +      R   M ++     F+       LP  WFI
Subjt:  CHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAAFGTEFEPDLNAFKLPAPWFI

Query:  YSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQALSLLLA
        Y F+G+G++L  I+  GC+   + S CCL  Y++L++L ILVE+   AFI  D  W  +LP D TG  + +  F+ +N  + +W+ +  +  +AL  LLA
Subjt:  YSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQALSLLLA

Query:  IILRSMVSTRKTEYDAEED-TDGRDRTREPLLNPPANQASG-----------THFDLWGARMREKYGLNNSD-RYNSS
        +++R+  +    EYD++++    R + R+P +N  A   +G           +  D W ARMREKYGL+ S+  YN S
Subjt:  IILRSMVSTRKTEYDAEED-TDGRDRTREPLLNPPANQASG-----------THFDLWGARMREKYGLNNSD-RYNSS

Q9SVU4 Tetraspanin-204.8e-7452.65Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRV----------ADRFAAMNLAAFGTEF
        M   CCHVS A +LK  NFLQAF+GISII+YS WMLD+++H  VPV PPP  P  A SP SS+S  F++  I +           D  + + L + G + 
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRV----------ADRFAAMNLAAFGTEF

Query:  EPDLNAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWI
          +L +  LPAPWFIY FM +GI +C +T++G IAAEAI+GCCLCFY++L  L I++E ALV FI IDR WEKDLP+DPTGEL  LR FIE+N+D+CKW+
Subjt:  EPDLNAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWI

Query:  GIIVISTQALSLLLAIILRSMVSTRKTEYDAEEDTDG-RDRTREPLLNPPANQAS--GTHFDLWGARMREKYGLNNSDRYNSS
        GI+V++ Q LSLLLA++LR+MVS R++E D E+D +    R R+ LL P ANQ S   ++ D W +R+REKYGL NS  +  S
Subjt:  GIIVISTQALSLLLAIILRSMVSTRKTEYDAEEDTDG-RDRTREPLLNPPANQAS--GTHFDLWGARMREKYGLNNSDRYNSS

Arabidopsis top hitse value%identityAlignment
AT2G20230.1 Tetraspanin family protein1.1e-7354.04Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIR-VADRFAAMNLAAFGTEFEPDLNAFKL
        M R CCHVS A  LK  NF+QAF+G+SII+YS WML  +S R +PV PPP   + + + +++      SEP++   D  A++ L + G +   +L +  L
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIR-VADRFAAMNLAAFGTEFEPDLNAFKL

Query:  PAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQA
        PAPWFIYSFM +GI +C +T +G IAAEAI+GCCLCFY++L  L IL+E ALVA+IAIDR WEKDLP+DPTGEL  LR FIE+N+D+CKW+GI V++ Q 
Subjt:  PAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQA

Query:  LSLLLAIILRSMVSTRKTEYDAEEDTDG-RDRTREPLLNPPANQ--ASGTHFDLWGARMREKYGLNNSDRYN
        LSLLLA++LR+MVST K E D EED +  R RT +PLL P  NQ  A  +  + W +R+REKYGLN S   N
Subjt:  LSLLLAIILRSMVSTRKTEYDAEEDTDG-RDRTREPLLNPPANQ--ASGTHFDLWGARMREKYGLNNSDRYN

AT2G20740.1 Tetraspanin family protein3.1e-2832.14Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAAFGTEFEPDLNAFKLP
        + R+C    L  +LK  N L   VGI++I+Y+ W++ +W  +                          + P   +D                       P
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAAFGTEFEPDLNAFKLP

Query:  APWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQAL
         PWFIYSF+GLG  LC +T  G IAAE ++GCCL  Y   I+L  +VE  +VA I ++R W+KD P DP+G      +FIE N  +CKWIG+ ++  Q L
Subjt:  APWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQAL

Query:  SLLLAIILRSMVSTRKTEYDAEED
        S+L+A++L+++       YD++++
Subjt:  SLLLAIILRSMVSTRKTEYDAEED

AT2G20740.2 Tetraspanin family protein3.5e-2744.8Show/hide
Query:  PAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQA
        P PWFIYSF+GLG  LC +T  G IAAE ++GCCL  Y   I+L  +VE  +VA I ++R W+KD P DP+G      +FIE N  +CKWIG+ ++  Q 
Subjt:  PAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQA

Query:  LSLLLAIILRSMVSTRKTEYDAEED
        LS+L+A++L+++       YD++++
Subjt:  LSLLLAIILRSMVSTRKTEYDAEED

AT4G28770.1 Tetraspanin family protein3.4e-7552.65Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRV----------ADRFAAMNLAAFGTEF
        M   CCHVS A +LK  NFLQAF+GISII+YS WMLD+++H  VPV PPP  P  A SP SS+S  F++  I +           D  + + L + G + 
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRV----------ADRFAAMNLAAFGTEF

Query:  EPDLNAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWI
          +L +  LPAPWFIY FM +GI +C +T++G IAAEAI+GCCLCFY++L  L I++E ALV FI IDR WEKDLP+DPTGEL  LR FIE+N+D+CKW+
Subjt:  EPDLNAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWI

Query:  GIIVISTQALSLLLAIILRSMVSTRKTEYDAEEDTDG-RDRTREPLLNPPANQAS--GTHFDLWGARMREKYGLNNSDRYNSS
        GI+V++ Q LSLLLA++LR+MVS R++E D E+D +    R R+ LL P ANQ S   ++ D W +R+REKYGL NS  +  S
Subjt:  GIIVISTQALSLLLAIILRSMVSTRKTEYDAEEDTDG-RDRTREPLLNPPANQAS--GTHFDLWGARMREKYGLNNSDRYNSS

AT4G28770.2 Tetraspanin family protein3.4e-7552.65Show/hide
Query:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRV----------ADRFAAMNLAAFGTEF
        M   CCHVS A +LK  NFLQAF+GISII+YS WMLD+++H  VPV PPP  P  A SP SS+S  F++  I +           D  + + L + G + 
Subjt:  MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRV----------ADRFAAMNLAAFGTEF

Query:  EPDLNAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWI
          +L +  LPAPWFIY FM +GI +C +T++G IAAEAI+GCCLCFY++L  L I++E ALV FI IDR WEKDLP+DPTGEL  LR FIE+N+D+CKW+
Subjt:  EPDLNAFKLPAPWFIYSFMGLGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWI

Query:  GIIVISTQALSLLLAIILRSMVSTRKTEYDAEEDTDG-RDRTREPLLNPPANQAS--GTHFDLWGARMREKYGLNNSDRYNSS
        GI+V++ Q LSLLLA++LR+MVS R++E D E+D +    R R+ LL P ANQ S   ++ D W +R+REKYGL NS  +  S
Subjt:  GIIVISTQALSLLLAIILRSMVSTRKTEYDAEEDTDG-RDRTREPLLNPPANQAS--GTHFDLWGARMREKYGLNNSDRYNSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGCACTTGTTGCCATGTATCTCTCGCCTTCGTCCTAAAATGCTTCAATTTTCTTCAAGCTTTTGTTGGAATCTCGATTATAGTTTACTCGGCATGGATGCTCGA
TCGGTGGAGCCATCGCGACGTTCCTGTGTCTCCGCCACCTCCCGTACCGGCTCTGGCTCCTTCCCCGGTTTCTTCTTTTTCGCTCTATTTTAATTCCGAACCAATCCGTG
TTGCCGATCGGTTCGCGGCCATGAATTTAGCTGCGTTCGGTACGGAATTTGAGCCTGATTTGAACGCATTTAAGCTTCCGGCCCCTTGGTTCATCTACTCATTCATGGGA
TTGGGCATCTCGTTGTGTTGTATTACTTTAGTTGGCTGTATTGCAGCTGAAGCAATAAGTGGCTGCTGCCTTTGTTTCTATAATATGCTTATAATGCTGTTTATTCTCGT
TGAAGTGGCTCTGGTGGCATTTATTGCAATTGATCGCGGGTGGGAAAAGGACCTTCCGTTTGACCCAACTGGAGAATTGGAGGGACTCAGGCAATTCATTGAAGACAATG
TAGATCTATGCAAGTGGATCGGCATCATTGTGATATCAACCCAGGCATTATCTTTACTGCTGGCAATTATTCTGAGATCCATGGTTTCAACCCGTAAAACTGAGTATGAT
GCTGAAGAGGATACCGATGGTCGTGATAGAACTCGGGAGCCATTACTCAATCCACCAGCAAATCAAGCTTCCGGTACTCATTTTGACCTTTGGGGTGCACGCATGAGAGA
GAAGTATGGATTAAACAACAGTGACAGATACAATTCATCAAACCAAAGTTCA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGCACTTGTTGCCATGTATCTCTCGCCTTCGTCCTAAAATGCTTCAATTTTCTTCAAGCTTTTGTTGGAATCTCGATTATAGTTTACTCGGCATGGATGCTCGA
TCGGTGGAGCCATCGCGACGTTCCTGTGTCTCCGCCACCTCCCGTACCGGCTCTGGCTCCTTCCCCGGTTTCTTCTTTTTCGCTCTATTTTAATTCCGAACCAATCCGTG
TTGCCGATCGGTTCGCGGCCATGAATTTAGCTGCGTTCGGTACGGAATTTGAGCCTGATTTGAACGCATTTAAGCTTCCGGCCCCTTGGTTCATCTACTCATTCATGGGA
TTGGGCATCTCGTTGTGTTGTATTACTTTAGTTGGCTGTATTGCAGCTGAAGCAATAAGTGGCTGCTGCCTTTGTTTCTATAATATGCTTATAATGCTGTTTATTCTCGT
TGAAGTGGCTCTGGTGGCATTTATTGCAATTGATCGCGGGTGGGAAAAGGACCTTCCGTTTGACCCAACTGGAGAATTGGAGGGACTCAGGCAATTCATTGAAGACAATG
TAGATCTATGCAAGTGGATCGGCATCATTGTGATATCAACCCAGGCATTATCTTTACTGCTGGCAATTATTCTGAGATCCATGGTTTCAACCCGTAAAACTGAGTATGAT
GCTGAAGAGGATACCGATGGTCGTGATAGAACTCGGGAGCCATTACTCAATCCACCAGCAAATCAAGCTTCCGGTACTCATTTTGACCTTTGGGGTGCACGCATGAGAGA
GAAGTATGGATTAAACAACAGTGACAGATACAATTCATCAAACCAAAGTTCA
Protein sequenceShow/hide protein sequence
MARTCCHVSLAFVLKCFNFLQAFVGISIIVYSAWMLDRWSHRDVPVSPPPPVPALAPSPVSSFSLYFNSEPIRVADRFAAMNLAAFGTEFEPDLNAFKLPAPWFIYSFMG
LGISLCCITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRGWEKDLPFDPTGELEGLRQFIEDNVDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYD
AEEDTDGRDRTREPLLNPPANQASGTHFDLWGARMREKYGLNNSDRYNSSNQSS