; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017638 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017638
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type domain-containing protein
Genome locationscaffold373:1086881..1089368
RNA-Seq ExpressionMS017638
SyntenyMS017638
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579565.1 30S ribosomal protein S6 alpha, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-8886.79Show/hide
Query:  PQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSS---PPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEE
        PQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLS SSSSS   PPILPT+SN LTLYVTTACQV  KADNP++KLPKILFNEE
Subjt:  PQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSS---PPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEE

Query:  LRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLP---SELPLTSNQTAEMVSYSLRHPQL
        LR RDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLT+NSTCPLCRCSVIP  RC DPPV   SP  P P   SELP TSNQTAEM SYSL HPQL
Subjt:  LRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLP---SELPLTSNQTAEMVSYSLRHPQL

Query:  -QQQEGSSQSIC
         QQQEGSSQSIC
Subjt:  -QQQEGSSQSIC

XP_022157001.1 probable E3 ubiquitin-protein ligase RHA4A [Momordica charantia]2.0e-10999.52Show/hide
Query:  MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEE
        MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQV SKADNPIEKLPKILFNEE
Subjt:  MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEE

Query:  LRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPSELPLTSNQTAEMVSYSLRHPQLQQQ
        LRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPSELPLTSNQTAEMVSYSLRHPQLQQQ
Subjt:  LRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPSELPLTSNQTAEMVSYSLRHPQLQQQ

Query:  EGSSQSIC
        EGSSQSIC
Subjt:  EGSSQSIC

XP_022928899.1 probable E3 ubiquitin-protein ligase RHA4A [Cucurbita moschata]1.6e-9086.98Show/hide
Query:  MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSS---PPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILF
        MG PQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLS SSSSS   PPILPT+SN LTLYVTTACQV  KADNP++KLPKILF
Subjt:  MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSS---PPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILF

Query:  NEELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLP---SELPLTSNQTAEMVSYSLRH
        NEELR RDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLT+NSTCPLCRCSVIP  RC DPPV   SP  P P   SELPLTSNQTAEM SYSL H
Subjt:  NEELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLP---SELPLTSNQTAEMVSYSLRH

Query:  PQL-QQQEGSSQSIC
        PQL QQQEGSSQSIC
Subjt:  PQL-QQQEGSSQSIC

XP_023534491.1 probable E3 ubiquitin-protein ligase RHA4A [Cucurbita pepo subsp. pepo]9.5e-8882.27Show/hide
Query:  MGLPQTP-APPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSS--PPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILF
        MG+PQTP APPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLS SSSSS  PPILPT+SN LTLYVTTAC+V  KADNPI+KLPKI F
Subjt:  MGLPQTP-APPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSS--PPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILF

Query:  NEELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPS---------ELPLTSNQTAEMV
        NEELR+RDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMN WL +NSTCPLCRCSVIP  RC DPPV  P    P P          ELPL SNQTAEMV
Subjt:  NEELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPS---------ELPLTSNQTAEMV

Query:  SYSLRHPQLQQQEGSSQSIC
        SYSL+HPQLQQQ GSSQSIC
Subjt:  SYSLRHPQLQQQEGSSQSIC

XP_038907033.1 probable E3 ubiquitin-protein ligase RHA4A [Benincasa hispida]3.0e-8985.71Show/hide
Query:  MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEE
        MGLPQTP+PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLS SSSSSPPILPT+SN LTLYVTTACQV  KADN IEKLPKI F+EE
Subjt:  MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEE

Query:  LRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPSELPLTSNQTAEMVSYSLRHPQL--Q
        L+ RDSLCCVCLGEFEIKE+LLQVPSCKHVFHIDCMNHWL +NSTCPLCRCSVIP  RC DPP  AP P L   SELP TSNQTAEM SYSL+H QL  Q
Subjt:  LRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPSELPLTSNQTAEMVSYSLRHPQL--Q

Query:  QQEGSSQSIC
        QQEGSSQSIC
Subjt:  QQEGSSQSIC

TrEMBL top hitse value%identityAlignment
A0A6J1DWP0 probable E3 ubiquitin-protein ligase RHA4A9.6e-11099.52Show/hide
Query:  MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEE
        MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQV SKADNPIEKLPKILFNEE
Subjt:  MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEE

Query:  LRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPSELPLTSNQTAEMVSYSLRHPQLQQQ
        LRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPSELPLTSNQTAEMVSYSLRHPQLQQQ
Subjt:  LRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPSELPLTSNQTAEMVSYSLRHPQLQQQ

Query:  EGSSQSIC
        EGSSQSIC
Subjt:  EGSSQSIC

A0A6J1EM64 probable E3 ubiquitin-protein ligase RHA4A7.6e-9186.98Show/hide
Query:  MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSS---PPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILF
        MG PQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLS SSSSS   PPILPT+SN LTLYVTTACQV  KADNP++KLPKILF
Subjt:  MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSS---PPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILF

Query:  NEELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLP---SELPLTSNQTAEMVSYSLRH
        NEELR RDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLT+NSTCPLCRCSVIP  RC DPPV   SP  P P   SELPLTSNQTAEM SYSL H
Subjt:  NEELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLP---SELPLTSNQTAEMVSYSLRH

Query:  PQL-QQQEGSSQSIC
        PQL QQQEGSSQSIC
Subjt:  PQL-QQQEGSSQSIC

A0A6J1H2A4 probable E3 ubiquitin-protein ligase RHA4A7.9e-8882.19Show/hide
Query:  MGLPQTP-APPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSS-PPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFN
        MG+PQTP APPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLS SSSSS PPILPT+SN LTLYVTTAC+V  KADNP++KLPKI FN
Subjt:  MGLPQTP-APPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSS-PPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFN

Query:  EELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPS---------ELPLTSNQTAEMVS
        EELR+RDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMN WL +NSTCPLCRCSVIP  RC DPPV  P    P P          ELPL SNQTAEMVS
Subjt:  EELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPS---------ELPLTSNQTAEMVS

Query:  YSLRHPQLQQQEGSSQSIC
        YSL+HPQLQQQ GSSQSIC
Subjt:  YSLRHPQLQQQEGSSQSIC

A0A6J1I2V6 probable E3 ubiquitin-protein ligase RHA4A2.3e-8784.58Show/hide
Query:  MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSS---PPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILF
        MG PQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLS SSSSS   PPILPT+SN LTLYVTTACQV  KADNP++KLPKILF
Subjt:  MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSS---PPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILF

Query:  NEELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPL--PSELPLTSNQTAEMVSYSLRHP
        NEELR RDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLT+NSTCPLCRCSVIP  RC D PV    P  P    SE P TS+QTAEM SYSL HP
Subjt:  NEELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPL--PSELPLTSNQTAEMVSYSLRHP

Query:  QL-QQQEGSSQSIC
        QL QQQEGSSQSIC
Subjt:  QL-QQQEGSSQSIC

A0A6J1K5R3 probable E3 ubiquitin-protein ligase RHA4A8.7e-8782.11Show/hide
Query:  MGLPQT-PAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSS--PPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILF
        MG+PQT  APPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLS SSSSS  PPILPT+SN LTLYVTTAC+V  KA+NPI+KLPKI F
Subjt:  MGLPQT-PAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSS--PPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILF

Query:  NEELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPS-------ELPLTSNQTAEMVSY
        NEELR+RDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMN WL +NSTCPLCRCSVIP  RC DPPV  P    P P        ELPL SNQTAEMVSY
Subjt:  NEELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPS-------ELPLTSNQTAEMVSY

Query:  SLRHPQLQQQEGSSQSIC
        SL+HPQLQQQ GSSQSIC
Subjt:  SLRHPQLQQQEGSSQSIC

SwissProt top hitse value%identityAlignment
Q570X5 RING-H2 finger protein ATL582.2e-2338.38Show/hide
Query:  QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEELRARDSLCCVCLGEFEI
        +LKLYQAFIFS+PI F+ I+  LFYL YL+R +S LS     +  I   S + + L ++   +         E LP ++F E     DS C VCLG+++ 
Subjt:  QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEELRARDSLCCVCLGEFEI

Query:  KEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIP--PIRCPDPPVAAPSPTLPLPSELPLTSNQTAEMVSYSLRHPQLQQQ
         ++L Q+P CKH FH+DC++ WLT+++TCPLCR ++IP    +  D PV    P+L  P E  ++S   +E V++ +   Q + +
Subjt:  KEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIP--PIRCPDPPVAAPSPTLPLPSELPLTSNQTAEMVSYSLRHPQLQQQ

Q84TF5 Probable E3 ubiquitin-protein ligase RHA4A6.5e-4766.89Show/hide
Query:  PQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALT-LYVTTACQVVSKADNPIEKLPKILFNEELR
        PQ+P  PHLYPQA+QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSL   SS SP ILP SS+  T  ++ + C +  K +   +KL  +LFNEEL 
Subjt:  PQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALT-LYVTTACQVVSKADNPIEKLPKILFNEELR

Query:  ARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSV
         RDSLCCVCLGEFE+KEEL+++P CKH+FH+DC++ WL +++TCPLCR SV
Subjt:  ARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSV

Q8GW38 RING-H2 finger protein ATL479.8e-1137.5Show/hide
Query:  IFSIPILFSIILFL-----LFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNP-----IEKLPKILFNEELRARDSL-CCVCLGE
        I  I +L S+I F+     L   +YLK++ S+LS S + S    P  S++ T Y     Q+    D+      I+ LP  L+ E    ++   C VCL E
Subjt:  IFSIPILFSIILFL-----LFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNP-----IEKLPKILFNEELRARDSL-CCVCLGE

Query:  FEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCR
        F   ++L  +P+C H FHIDC++ WL +NSTCPLCR
Subjt:  FEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCR

Q9SN27 E3 ubiquitin-protein ligase ATL599.2e-1738.93Show/hide
Query:  FIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEELRARDSLCCVCLGEFEIKEELLQV
        FI  +PI   +I+ L+ Y+    RR S+ +   SS    +PT++N     ++TA   +SK  +  E LP +++ E     D+ C VCLG+++ +E+L Q+
Subjt:  FIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEELRARDSLCCVCLGEFEIKEELLQV

Query:  PSCKHVFHIDCMNHWLTTNSTCPLCRCSVIP
        PSC H FH++C++ WLT+++TCPLCR S+IP
Subjt:  PSCKHVFHIDCMNHWLTTNSTCPLCRCSVIP

Q9SN28 RING-H2 finger protein ATL72.2e-2341.03Show/hide
Query:  LPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRA-SSLSFSS--SSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNE
        +P+T AP +   ++ +LKLYQAFIFS+PI F+ I+  + Y+ YL+R + +++ +SS        +PT++N     ++TA   +SK  +  E LP +++ E
Subjt:  LPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRA-SSLSFSS--SSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNE

Query:  ELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIP
            +DS C VCLG+++ +E+L Q+PSC H FH++C++ WLT+++TCPLCR S+IP
Subjt:  ELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIP

Arabidopsis top hitse value%identityAlignment
AT1G33480.1 RING/U-box superfamily protein1.6e-2438.38Show/hide
Query:  QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEELRARDSLCCVCLGEFEI
        +LKLYQAFIFS+PI F+ I+  LFYL YL+R +S LS     +  I   S + + L ++   +         E LP ++F E     DS C VCLG+++ 
Subjt:  QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEELRARDSLCCVCLGEFEI

Query:  KEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIP--PIRCPDPPVAAPSPTLPLPSELPLTSNQTAEMVSYSLRHPQLQQQ
         ++L Q+P CKH FH+DC++ WLT+++TCPLCR ++IP    +  D PV    P+L  P E  ++S   +E V++ +   Q + +
Subjt:  KEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIP--PIRCPDPPVAAPSPTLPLPSELPLTSNQTAEMVSYSLRHPQLQQQ

AT4G10150.1 RING/U-box superfamily protein1.6e-2441.03Show/hide
Query:  LPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRA-SSLSFSS--SSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNE
        +P+T AP +   ++ +LKLYQAFIFS+PI F+ I+  + Y+ YL+R + +++ +SS        +PT++N     ++TA   +SK  +  E LP +++ E
Subjt:  LPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRA-SSLSFSS--SSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNE

Query:  ELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIP
            +DS C VCLG+++ +E+L Q+PSC H FH++C++ WLT+++TCPLCR S+IP
Subjt:  ELRARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIP

AT4G10160.1 RING/U-box superfamily protein6.5e-1838.93Show/hide
Query:  FIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEELRARDSLCCVCLGEFEIKEELLQV
        FI  +PI   +I+ L+ Y+    RR S+ +   SS    +PT++N     ++TA   +SK  +  E LP +++ E     D+ C VCLG+++ +E+L Q+
Subjt:  FIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEELRARDSLCCVCLGEFEIKEELLQV

Query:  PSCKHVFHIDCMNHWLTTNSTCPLCRCSVIP
        PSC H FH++C++ WLT+++TCPLCR S+IP
Subjt:  PSCKHVFHIDCMNHWLTTNSTCPLCRCSVIP

AT4G24015.1 RING/U-box superfamily protein4.6e-4866.89Show/hide
Query:  PQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALT-LYVTTACQVVSKADNPIEKLPKILFNEELR
        PQ+P  PHLYPQA+QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSL   SS SP ILP SS+  T  ++ + C +  K +   +KL  +LFNEEL 
Subjt:  PQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALT-LYVTTACQVVSKADNPIEKLPKILFNEELR

Query:  ARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSV
         RDSLCCVCLGEFE+KEEL+++P CKH+FH+DC++ WL +++TCPLCR SV
Subjt:  ARDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSV

AT5G53110.1 RING/U-box superfamily protein1.1e-1234.21Show/hide
Query:  HLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEELR---ARDSL
        H++  A+  +   A      I  ++I+F LF   Y K   SS        P   P  +NA   Y+ ++  V+      IE  PKI+  E  R     D+ 
Subjt:  HLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEELR---ARDSL

Query:  CCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCS---VIPP
        C +CL E+E KE L  +P C+H FH DC++ WL  N TCP+CR S   ++PP
Subjt:  CCVCLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCS---VIPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGCCTCAAACTCCAGCCCCTCCTCATCTTTATCCTCAAGCACTGCAGCTGAAGCTTTATCAGGCCTTCATATTCTCCATTCCAATCCTCTTCTCCATTATTCT
TTTTCTTCTTTTCTACTTGTTCTACCTCAAGAGAAGGGCTTCCTCTCTCTCTTTTTCTTCTTCTTCTTCCCCACCAATTCTTCCAACTTCTTCCAATGCGCTCACTCTCT
ATGTTACCACTGCTTGTCAAGTGGTCTCGAAGGCAGATAATCCAATTGAAAAACTTCCCAAGATCCTATTCAATGAAGAGCTGAGGGCCAGAGATTCTCTGTGCTGCGTC
TGCCTGGGAGAATTTGAGATAAAAGAGGAATTGTTGCAAGTCCCATCATGCAAACATGTGTTTCATATTGACTGCATGAACCACTGGCTCACCACCAACTCAACTTGTCC
CCTCTGTAGATGCTCAGTTATCCCACCAATCAGATGTCCCGATCCGCCTGTGGCAGCACCGTCACCGACTCTGCCACTGCCATCGGAGCTTCCCCTGACTTCCAACCAGA
CTGCAGAGATGGTATCATATTCACTCCGCCATCCGCAGCTGCAACAACAGGAAGGATCAAGTCAGAGTATATGC
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTGCCTCAAACTCCAGCCCCTCCTCATCTTTATCCTCAAGCACTGCAGCTGAAGCTTTATCAGGCCTTCATATTCTCCATTCCAATCCTCTTCTCCATTATTCT
TTTTCTTCTTTTCTACTTGTTCTACCTCAAGAGAAGGGCTTCCTCTCTCTCTTTTTCTTCTTCTTCTTCCCCACCAATTCTTCCAACTTCTTCCAATGCGCTCACTCTCT
ATGTTACCACTGCTTGTCAAGTGGTCTCGAAGGCAGATAATCCAATTGAAAAACTTCCCAAGATCCTATTCAATGAAGAGCTGAGGGCCAGAGATTCTCTGTGCTGCGTC
TGCCTGGGAGAATTTGAGATAAAAGAGGAATTGTTGCAAGTCCCATCATGCAAACATGTGTTTCATATTGACTGCATGAACCACTGGCTCACCACCAACTCAACTTGTCC
CCTCTGTAGATGCTCAGTTATCCCACCAATCAGATGTCCCGATCCGCCTGTGGCAGCACCGTCACCGACTCTGCCACTGCCATCGGAGCTTCCCCTGACTTCCAACCAGA
CTGCAGAGATGGTATCATATTCACTCCGCCATCCGCAGCTGCAACAACAGGAAGGATCAAGTCAGAGTATATGC
Protein sequenceShow/hide protein sequence
MGLPQTPAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSSSPPILPTSSNALTLYVTTACQVVSKADNPIEKLPKILFNEELRARDSLCCV
CLGEFEIKEELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAAPSPTLPLPSELPLTSNQTAEMVSYSLRHPQLQQQEGSSQSIC