CuGenDBv2

Gene ID	MS017660
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Zinc finger matrin-type protein 1, putative isoform 1
Genome location	scaffold373:1255893..1258004
RNA-Seq Expression	MS017660
Synteny	MS017660
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022131237.1 uncharacterized protein LOC111004499 [Momordica charantia]

5.2e-136

97.69

Show/hide

Query:  MISLAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDST
        MISLAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKS NPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDST
Subjt:  MISLAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDST

Query:  DTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTRG
        DTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTRG
Subjt:  DTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTRG

Query:  RDHFKGSQGPPE-----EDMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRKH
        RDHFKGSQGPPE     EDMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRKH
Subjt:  RDHFKGSQGPPE-----EDMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRKH

XP_022958725.1 uncharacterized protein LOC111459865 isoform X2 [Cucurbita moschata]

1.1e-101

75.77

Show/hide

Query:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDS
        MI+LA A LSSSPSN SSL  LRL +PP TFSTSLSNLK  NP  K+AS+Q+   NG+CRA+LGND PFA+AIGACILSS V P AGGGSDD+SDAV+DS
Subjt:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDS

Query:  TDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTR
        TD R AVMGIISFIPYFNWLSWVFAWLDSG+R YAVYA+VYL PYLRSNLSLSP+ESWLPI SIL+CI HIQ+E SI+NGDIQPFQIFGKTS +IS T  
Subjt:  TDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTR

Query:  GRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRK
         R H KGSQGP ++     DMKLPS +EQLRDEI+ WGD KETLDHEQSN EWDDEQRRK
Subjt:  GRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRK

XP_023534481.1 uncharacterized protein LOC111796027 isoform X1 [Cucurbita pepo subsp. pepo]

1.9e-101

76.25

Show/hide

Query:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKR-IGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVID
        MI+LA A LSSSPSN SSL  LRL +PP TFSTSLSNLK  NP  K+AS+QKR   NG+CRA+LGND PFA+AIGACIL+S V P AGGGSDD+SDAV+D
Subjt:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKR-IGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVID

Query:  STDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTT
        STD R AVMGIISFIPYFNWLSWVFAWLDSG+R YAVYA+VYL PYLRSNLSLSP+ESWLPI SIL+CI HIQ+E SI+NGDIQPFQIFGK S +IS T 
Subjt:  STDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTT

Query:  RGRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRK
         GR H KGSQGP ++     DMKLPS +EQLRDEIR WGD KETLDHEQSN EWDDEQRRK
Subjt:  RGRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRK

XP_023534483.1 uncharacterized protein LOC111796027 isoform X2 [Cucurbita pepo subsp. pepo]

8.3e-102

75.77

Show/hide

Query:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDS
        MI+LA A LSSSPSN SSL  LRL +PP TFSTSLSNLK  NP  K+AS+Q+   NG+CRA+LGND PFA+AIGACIL+S V P AGGGSDD+SDAV+DS
Subjt:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDS

Query:  TDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTR
        TD R AVMGIISFIPYFNWLSWVFAWLDSG+R YAVYA+VYL PYLRSNLSLSP+ESWLPI SIL+CI HIQ+E SI+NGDIQPFQIFGK S +IS T  
Subjt:  TDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTR

Query:  GRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRK
        GR H KGSQGP ++     DMKLPS +EQLRDEIR WGD KETLDHEQSN EWDDEQRRK
Subjt:  GRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRK

XP_038875289.1 uncharacterized protein LOC120067780 [Benincasa hispida]

7.3e-106

79.69

Show/hide

Query:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDS
        MI+LA A LSSS SNLSSLK LRL +P STFS SLSNLK  NP  K  S+Q RIGNG+CRA+LGND PFA+AIGAC LSS V PVA G SDDESDA+IDS
Subjt:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDS

Query:  TDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTR
        TDTR AVM IISFIPYFNWLSWVFAWLDSGRRLYAVYA+VYL PYLRSNLSLSPEESWLPI SILLCIIHIQLEVSI NGDIQP QIFGK SK ISST +
Subjt:  TDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTR

Query:  GRDHFKGSQGP-----PEEDMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRKH
        GRDHFKGSQGP      +ED KLPS +EQ +D+IRRWGDSKE LD+EQSNGEWDDEQRRKH
Subjt:  GRDHFKGSQGP-----PEEDMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRKH

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BQE6 uncharacterized protein LOC111004499

2.5e-136

97.69

Show/hide

Query:  MISLAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDST
        MISLAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKS NPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDST
Subjt:  MISLAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDST

Query:  DTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTRG
        DTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTRG
Subjt:  DTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTRG

Query:  RDHFKGSQGPPE-----EDMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRKH
        RDHFKGSQGPPE     EDMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRKH
Subjt:  RDHFKGSQGPPE-----EDMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRKH

A0A6J1H4A9 uncharacterized protein LOC111459865 isoform X2

5.3e-102

75.77

Show/hide

Query:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDS
        MI+LA A LSSSPSN SSL  LRL +PP TFSTSLSNLK  NP  K+AS+Q+   NG+CRA+LGND PFA+AIGACILSS V P AGGGSDD+SDAV+DS
Subjt:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDS

Query:  TDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTR
        TD R AVMGIISFIPYFNWLSWVFAWLDSG+R YAVYA+VYL PYLRSNLSLSP+ESWLPI SIL+CI HIQ+E SI+NGDIQPFQIFGKTS +IS T  
Subjt:  TDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTR

Query:  GRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRK
         R H KGSQGP ++     DMKLPS +EQLRDEI+ WGD KETLDHEQSN EWDDEQRRK
Subjt:  GRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRK

A0A6J1H5Y1 uncharacterized protein LOC111459865 isoform X1

2.6e-101

75.86

Show/hide

Query:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKR-IGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVID
        MI+LA A LSSSPSN SSL  LRL +PP TFSTSLSNLK  NP  K+AS+Q+R   NG+CRA+LGND PFA+AIGACILSS V P AGGGSDD+SDAV+D
Subjt:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKR-IGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVID

Query:  STDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTT
        STD R AVMGIISFIPYFNWLSWVFAWLDSG+R YAVYA+VYL PYLRSNLSLSP+ESWLPI SIL+CI HIQ+E SI+NGDIQPFQIFGKTS +IS T 
Subjt:  STDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTT

Query:  RGRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRK
          R H KGSQGP ++     DMKLPS +EQLRDEI+ WGD KETLDHEQSN EWDDEQRRK
Subjt:  RGRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRK

A0A6J1K887 uncharacterized protein LOC111491538 isoform X2

3.4e-101

Show/hide

Query:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDS
        M++LA A LSSSPSN SSL  LRL +PP TFSTSLSNLK  NP  K+AS+Q+   NG+CRA+LGND PFA+AIGACILSS V P AGGGSDD+SDAV+DS
Subjt:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDS

Query:  TDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTR
        TD R AVMGIISFIPYFNWLSWVFAWLDSG+R YAVYA+VYL PYLRSNLSLSP+ESWLPI SIL+CI HIQ+E SI+NGDIQPFQIFGK S +IS T  
Subjt:  TDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTR

Query:  GRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRK
        GR H KG +GP ++     DMKLPS +EQLRDEIR WGD KETLDHEQSN EWDDEQRRK
Subjt:  GRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRK

A0A6J1KAA9 uncharacterized protein LOC111491538 isoform X1

1.7e-100

75.1

Show/hide

Query:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKR-IGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVID
        M++LA A LSSSPSN SSL  LRL +PP TFSTSLSNLK  NP  K+AS+Q+R   NG+CRA+LGND PFA+AIGACILSS V P AGGGSDD+SDAV+D
Subjt:  MISLAYASLSSSPSNLSSLK-LRLPRPPSTFSTSLSNLKSFNPCDKAASDQKR-IGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVID

Query:  STDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTT
        STD R AVMGIISFIPYFNWLSWVFAWLDSG+R YAVYA+VYL PYLRSNLSLSP+ESWLPI SIL+CI HIQ+E SI+NGDIQPFQIFGK S +IS T 
Subjt:  STDTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTT

Query:  RGRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRK
         GR H KG +GP ++     DMKLPS +EQLRDEIR WGD KETLDHEQSN EWDDEQRRK
Subjt:  RGRDHFKGSQGPPEE-----DMKLPSIQEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G41960.1 unknown protein

5.1e-49

52.56

Show/hide

Query:  LAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESD---AVIDST
        L    LSSS S  +  +L      S+ S+S S L    P        ++I   +CRA+   D P   AIGACILSSFVFPVA   +D+E +   + I ST
Subjt:  LAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESD---AVIDST

Query:  DTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTRG
        D R A MGIISFIPYFNWLSWVFAWLD+G+  YAVYALVYLVPYL SNLS+SPEESWLPI SI+L IIH+QLE SI NGD++    F  TS    S+ + 
Subjt:  DTRFAVMGIISFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTRG

Query:  ---RDHFKGSQGPPE
           + HFKG     E
Subjt:  ---RDHFKGSQGPPE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATTTCTCTAGCTTATGCTTCTCTATCATCCTCCCCTTCCAATTTGTCTTCTCTGAAGCTTCGTCTCCCCAGACCGCCTTCCACCTTCTCAACATCCCTCTCCAATCT
CAAATCCTTCAATCCTTGCGACAAAGCAGCTTCCGACCAGAAGAGGATTGGGAATGGGGTTTGTAGGGCGGACTTGGGGAACGACGGGCCTTTTGCCGTTGCGATCGGGG
CCTGCATTCTCAGTTCGTTTGTTTTTCCGGTAGCTGGCGGTGGTTCCGATGATGAGAGCGATGCCGTCATTGATTCCACCGATACCAGGTTCGCTGTCATGGGTATCATT
AGCTTTATCCCCTACTTCAACTGGCTGAGTTGGGTTTTTGCGTGGCTTGATTCTGGGAGAAGGCTTTATGCTGTGTATGCACTCGTGTATTTGGTCCCTTATCTAAGGTC
AAATTTATCTCTATCCCCTGAAGAGAGTTGGCTTCCTATTGCCAGTATACTTCTCTGCATTATTCACATTCAGCTTGAAGTGAGCATTAGAAATGGAGATATCCAACCCT
TCCAAATATTTGGAAAAACTTCCAAGAAAATTTCTTCAACTACAAGAGGGAGAGACCATTTCAAGGGGTCCCAAGGACCACCCGAAGAGGACATGAAGCTGCCATCAATT
CAAGAACAATTAAGAGATGAGATTAGAAGATGGGGAGATTCTAAAGAGACATTAGATCATGAACAATCAAATGGAGAATGGGATGATGAACAGAGGAGAAAACAT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MISLAYASLSSSPSNLSSLKLRLPRPPSTFSTSLSNLKSFNPCDKAASDQKRIGNGVCRADLGNDGPFAVAIGACILSSFVFPVAGGGSDDESDAVIDSTDTRFAVMGII
SFIPYFNWLSWVFAWLDSGRRLYAVYALVYLVPYLRSNLSLSPEESWLPIASILLCIIHIQLEVSIRNGDIQPFQIFGKTSKKISSTTRGRDHFKGSQGPPEEDMKLPSI
QEQLRDEIRRWGDSKETLDHEQSNGEWDDEQRRKH

MS017660 (gene) of Bitter gourd (TR) v1 genome