; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017686 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017686
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description50S ribosomal protein L11
Genome locationscaffold373:1528110..1534076
RNA-Seq ExpressionMS017686
SyntenyMS017686
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0070180 - large ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR000911 - Ribosomal protein L11/L12
IPR006519 - Ribosomal protein L11, bacterial-type
IPR020783 - Ribosomal protein L11, C-terminal
IPR020784 - Ribosomal protein L11, N-terminal
IPR020785 - Ribosomal protein L11, conserved site
IPR036769 - Ribosomal protein L11, C-terminal domain superfamily
IPR036796 - Ribosomal protein L11/L12, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647824.1 hypothetical protein Csa_000647 [Cucumis sativus]2.2e-10488.51Show/hide
Query:  MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGK
        MASS+STY QHHLLSP FSSK SA+  + LSSPFL   +SGLSS FNFSL+FL+NGQSSSL+S  PRRLSV+SMAPPKAKPGGK+KKVIGMIKLALEAGK
Subjt:  MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGK

Query:  ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLN
        ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ EKVGKITIEQLR IAAEKLPDLN
Subjt:  ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLN

Query:  CTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
        CTTIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Subjt:  CTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

XP_004145879.2 50S ribosomal protein L11, chloroplastic [Cucumis sativus]2.2e-10488.51Show/hide
Query:  MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGK
        MASS+STY QHHLLSP FSSK SA+  + LSSPFL   +SGLSS FNFSL+FL+NGQSSSL+S  PRRLSV+SMAPPKAKPGGK+KKVIGMIKLALEAGK
Subjt:  MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGK

Query:  ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLN
        ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ EKVGKITIEQLR IAAEKLPDLN
Subjt:  ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLN

Query:  CTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
        CTTIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Subjt:  CTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

XP_008437462.1 PREDICTED: 50S ribosomal protein L11, chloroplastic [Cucumis melo]2.5e-10589.36Show/hide
Query:  MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGK
        MASSLSTY QHHLLSP FSSK SAN    LSSPFL   +SGLSS FNFSL+FL+NGQSSSL+S  PRRLSV+SMAPPKAKPGGK+KKVIGMIKLALEAGK
Subjt:  MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGK

Query:  ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLN
        ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ EKVGK+TIEQLRAIAAEKLPDLN
Subjt:  ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLN

Query:  CTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
        CTTIESAMRIIAGTAANMGIEVDPPVLEPK+K +V
Subjt:  CTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

XP_022155580.1 50S ribosomal protein L11, chloroplastic [Momordica charantia]2.1e-120100Show/hide
Query:  MASSLSTYQHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKA
        MASSLSTYQHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKA
Subjt:  MASSLSTYQHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKA

Query:  TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNC
        TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNC
Subjt:  TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNC

Query:  TTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
        TTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
Subjt:  TTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

XP_038876314.1 50S ribosomal protein L11, chloroplastic [Benincasa hispida]2.7e-10791.06Show/hide
Query:  MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGK
        MASSLSTY QHHLLSP FSSK +AN  K LSSPFL   +SGLSS FNFSL+FLSNGQSSSL+S  PRRLSV+SMAPPKAKPGGKSKKVIGMIKLALEAGK
Subjt:  MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGK

Query:  ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLN
        ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ EKVGK+TIEQLRAIAAEKLPDLN
Subjt:  ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLN

Query:  CTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
        CTTIESAMRIIAGTAANMGIEVDPPVLEPKKK+LV
Subjt:  CTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

TrEMBL top hitse value%identityAlignment
A0A0A0KQJ8 Uncharacterized protein1.0e-10488.51Show/hide
Query:  MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGK
        MASS+STY QHHLLSP FSSK SA+  + LSSPFL   +SGLSS FNFSL+FL+NGQSSSL+S  PRRLSV+SMAPPKAKPGGK+KKVIGMIKLALEAGK
Subjt:  MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGK

Query:  ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLN
        ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ EKVGKITIEQLR IAAEKLPDLN
Subjt:  ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLN

Query:  CTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
        CTTIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Subjt:  CTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

A0A1S3AU30 50S ribosomal protein L11, chloroplastic1.2e-10589.36Show/hide
Query:  MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGK
        MASSLSTY QHHLLSP FSSK SAN    LSSPFL   +SGLSS FNFSL+FL+NGQSSSL+S  PRRLSV+SMAPPKAKPGGK+KKVIGMIKLALEAGK
Subjt:  MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGK

Query:  ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLN
        ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ EKVGK+TIEQLRAIAAEKLPDLN
Subjt:  ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLN

Query:  CTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
        CTTIESAMRIIAGTAANMGIEVDPPVLEPK+K +V
Subjt:  CTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

A0A5D3C6S0 50S ribosomal protein L111.2e-10589.36Show/hide
Query:  MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGK
        MASSLSTY QHHLLSP FSSK SAN    LSSPFL   +SGLSS FNFSL+FL+NGQSSSL+S  PRRLSV+SMAPPKAKPGGK+KKVIGMIKLALEAGK
Subjt:  MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGK

Query:  ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLN
        ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ EKVGK+TIEQLRAIAAEKLPDLN
Subjt:  ATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLN

Query:  CTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
        CTTIESAMRIIAGTAANMGIEVDPPVLEPK+K +V
Subjt:  CTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

A0A6J1DMT9 50S ribosomal protein L11, chloroplastic1.0e-120100Show/hide
Query:  MASSLSTYQHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKA
        MASSLSTYQHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKA
Subjt:  MASSLSTYQHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKA

Query:  TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNC
        TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNC
Subjt:  TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNC

Query:  TTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
        TTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
Subjt:  TTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

A0A6J1HY65 50S ribosomal protein L11, chloroplastic3.1e-10187.61Show/hide
Query:  MASSLSTYQHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKA
        MASSLS Y        FSSK +AN  K LSS FLA P+SG SS FNFSL+F SNGQSSSL+S  PRRLSV+SMAPPKAKPGGKSKKVIG+IKLALEAGKA
Subjt:  MASSLSTYQHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKA

Query:  TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNC
        TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQA+KVGKITIEQLR IAAEKLPDLNC
Subjt:  TPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNC

Query:  TTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
        TTIESAMR+IAGTAANMGIEVDPPVLEPKKKELV
Subjt:  TTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

SwissProt top hitse value%identityAlignment
B7JWT8 50S ribosomal protein L112.4e-5071.74Show/hide
Query:  SKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKIT
        +KKV+ MIKLAL AGKA PAPPVGPALG  GVNIMAFCK+YNAKTAD+AG VIPVEI+V++D+SFTFVLKTPPASVL+ KAAGVE+GS  P   KVG IT
Subjt:  SKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKIT

Query:  IEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEV
         +QLR IA  K+PDLN   IE+AM+I+AGTA NMG+ +
Subjt:  IEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEV

B8HVL5 50S ribosomal protein L111.2e-4968.12Show/hide
Query:  SKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKIT
        +KKV+ +IKLA+ AGKA PAPP+GPALG  GVNIM FCK+YNA+TAD+AG VIPVEI+VY+D+SFTF+LKTPPASVL+ KAAG+E+GS +P  +KVGKIT
Subjt:  SKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKIT

Query:  IEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEV
          QLR IA  KLPDLN   +++AMRI+AGTA NMG+ +
Subjt:  IEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEV

O78412 50S ribosomal protein L11, chloroplastic3.2e-5072.46Show/hide
Query:  SKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKIT
        +KKV+ +IKLALEAGKATPAPPVGPALG +GVNI+ FCKDYNA+TADKAG +IPVEITVY+DKS+TFVLKTPPASVLL KAAGV+KGS +P+  +VG +T
Subjt:  SKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKIT

Query:  IEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEV
         +Q+  IA  KLPDLN   +ESA+RII GTA NMGI V
Subjt:  IEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEV

P31164 50S ribosomal protein L11, chloroplastic2.6e-7670.85Show/hide
Query:  LLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALG
        L++   SS  ++   ++L S  L   +  LSSN   SL+FL++    S  S+  RRLS+++MAP   KP GK+KKVIG+IKLALEAGKATPAPPVGPALG
Subjt:  LLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALG

Query:  SKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNCTTIESAMRIIA
        SKGVNIMAFCKDYNA+TADK G+VIPVEITV+DDKSFTF+LKTPPASVLLLKA+G EKGSKDPQ EKVGKITI+QLR IA EKLPDLNCTTIESAMRIIA
Subjt:  SKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNCTTIESAMRIIA

Query:  GTAANMGIEVDPPVLEPKKKELV
        GTAANMGI++DPP+L  KKKE++
Subjt:  GTAANMGIEVDPPVLEPKKKELV

Q9MAP3 50S ribosomal protein L11, chloroplastic4.1e-8282.47Show/hide
Query:  LSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEI
        LSS  N S++FL   Q S LLSS PR L+VI+MAPP  KPGGK+KKV+G+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADKAGY+IPVEI
Subjt:  LSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEI

Query:  TVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
        TV+DDKSFTF+LKTPPASVLLLKAAGVEKGSKDPQ +KVG ITI+QLR IAAEKLPDLNCTTIESAMRIIAGTAANMGI++DPP+LEPKKK ++
Subjt:  TVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

Arabidopsis top hitse value%identityAlignment
AT1G32990.1 plastid ribosomal protein l112.9e-8382.47Show/hide
Query:  LSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEI
        LSS  N S++FL   Q S LLSS PR L+VI+MAPP  KPGGK+KKV+G+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADKAGY+IPVEI
Subjt:  LSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEI

Query:  TVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
        TV+DDKSFTF+LKTPPASVLLLKAAGVEKGSKDPQ +KVG ITI+QLR IAAEKLPDLNCTTIESAMRIIAGTAANMGI++DPP+LEPKKK ++
Subjt:  TVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

AT4G35490.1 mitochondrial ribosomal protein L113.7e-2243.57Show/hide
Query:  KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTAD-KAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKIT
        + V   I+L + AG A PAPPVGPALG   +N+MAFCKD+NA+T   K    + V IT + D SF F +K+P  S  + KAAGV+KGS  P    V  ++
Subjt:  KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTAD-KAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKIT

Query:  IEQLRAIAAEKLPDLNC--TTIESAMRIIAGTAANMGIEV
        +  +  IA  K  D  C    +ES  + I GTA +MGI++
Subjt:  IEQLRAIAAEKLPDLNC--TTIESAMRIIAGTAANMGIEV

AT5G51610.1 Ribosomal protein L11 family protein3.1e-4051.03Show/hide
Query:  TSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIP
        ++ L+S  N S +FL+N Q S LLSS PR L+VI+ A   +K  GK+KKV+G++K+ + AGKAT APP                                
Subjt:  TSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIP

Query:  VEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKK
               D+SFTF+LKTPP S LLLKAAGV+KGSKDP+  KVG ITI+Q+R IA  KLP+LNCTTI S MR IAGTA NMGI++DPP+LEPK K
Subjt:  VEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCCCTCTCCACCTATCAACACCATCTTCTTTCTCCTCAATTTTCTTCAAAAACTAGTGCCAATGGCGGCAAGCAGCTCTCCTCTCCATTTCTTGCTTTACC
CACTTCAGGGTTGTCTTCAAACTTCAATTTCTCGCTAAAGTTCCTTAGCAATGGCCAATCTTCATCACTTCTCTCTTCCCGTCCAAGGCGTCTCAGTGTCATCTCAATGG
CGCCTCCCAAGGCCAAGCCTGGTGGAAAATCCAAGAAGGTAATTGGGATGATAAAGCTTGCTCTGGAGGCTGGCAAGGCTACCCCTGCTCCTCCCGTAGGCCCTGCTCTT
GGTTCGAAGGGTGTCAATATTATGGCCTTCTGTAAGGATTACAATGCTAAGACAGCCGACAAGGCCGGCTACGTTATTCCCGTTGAAATTACTGTTTACGATGATAAAAG
TTTTACTTTCGTGTTGAAGACCCCACCTGCTTCAGTTCTTCTTCTCAAGGCTGCTGGAGTTGAAAAAGGATCAAAAGATCCACAGGCGGAGAAAGTGGGAAAGATAACCA
TTGAACAATTGCGTGCGATTGCTGCTGAAAAGTTACCAGATTTGAATTGCACAACCATTGAATCCGCAATGAGAATCATAGCAGGTACAGCAGCCAATATGGGAATTGAG
GTTGACCCTCCTGTCCTCGAACCTAAGAAGAAGGAACTTGTG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCCCTCTCCACCTATCAACACCATCTTCTTTCTCCTCAATTTTCTTCAAAAACTAGTGCCAATGGCGGCAAGCAGCTCTCCTCTCCATTTCTTGCTTTACC
CACTTCAGGGTTGTCTTCAAACTTCAATTTCTCGCTAAAGTTCCTTAGCAATGGCCAATCTTCATCACTTCTCTCTTCCCGTCCAAGGCGTCTCAGTGTCATCTCAATGG
CGCCTCCCAAGGCCAAGCCTGGTGGAAAATCCAAGAAGGTAATTGGGATGATAAAGCTTGCTCTGGAGGCTGGCAAGGCTACCCCTGCTCCTCCCGTAGGCCCTGCTCTT
GGTTCGAAGGGTGTCAATATTATGGCCTTCTGTAAGGATTACAATGCTAAGACAGCCGACAAGGCCGGCTACGTTATTCCCGTTGAAATTACTGTTTACGATGATAAAAG
TTTTACTTTCGTGTTGAAGACCCCACCTGCTTCAGTTCTTCTTCTCAAGGCTGCTGGAGTTGAAAAAGGATCAAAAGATCCACAGGCGGAGAAAGTGGGAAAGATAACCA
TTGAACAATTGCGTGCGATTGCTGCTGAAAAGTTACCAGATTTGAATTGCACAACCATTGAATCCGCAATGAGAATCATAGCAGGTACAGCAGCCAATATGGGAATTGAG
GTTGACCCTCCTGTCCTCGAACCTAAGAAGAAGGAACTTGTG
Protein sequenceShow/hide protein sequence
MASSLSTYQHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSSLLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPAL
GSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKVGKITIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIE
VDPPVLEPKKKELV