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MS017719 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017719
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionsignal peptide peptidase-like 2
Genome locationscaffold373:1851713..1851868
RNA-Seq ExpressionMS017719
SyntenyMS017719
Gene Ontology termsGO:0033619 - membrane protein proteolysis (biological process)
GO:0005765 - lysosomal membrane (cellular component)
GO:0010008 - endosome membrane (cellular component)
GO:0030660 - Golgi-associated vesicle membrane (cellular component)
GO:0071458 - integral component of cytoplasmic side of endoplasmic reticulum membrane (cellular component)
GO:0071556 - integral component of lumenal side of endoplasmic reticulum membrane (cellular component)
GO:0042500 - aspartic endopeptidase activity, intramembrane cleaving (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647858.1 hypothetical protein Csa_000427 [Cucumis sativus]1.9e-1686.54Show/hide
Query:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        MDFQRHFLGG +I AL+LLLI +P HVTAGDIVHHDDLTPKKPGCENDFILV
Subjt:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

XP_004143899.1 signal peptide peptidase-like 2 isoform X1 [Cucumis sativus]1.9e-1686.54Show/hide
Query:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        MDFQRHFLGG +I AL+LLLI +P HVTAGDIVHHDDLTPKKPGCENDFILV
Subjt:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

XP_022157109.1 signal peptide peptidase-like 2 isoform X1 [Momordica charantia]5.1e-2298.08Show/hide
Query:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFI V
Subjt:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

XP_022157113.1 signal peptide peptidase-like 2 isoform X2 [Momordica charantia]6.6e-2298.08Show/hide
Query:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFI V
Subjt:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

XP_023550106.1 signal peptide peptidase-like 2 [Cucurbita pepo subsp. pepo]1.4e-1686.54Show/hide
Query:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        MDFQR FLGG  I AL+LLLI +PCHVTAGDIVHHDDLTPKKPGCENDFILV
Subjt:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

TrEMBL top hitse value%identityAlignment
A0A0A0KKI6 PA domain-containing protein9.0e-1786.54Show/hide
Query:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        MDFQRHFLGG +I AL+LLLI +P HVTAGDIVHHDDLTPKKPGCENDFILV
Subjt:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

A0A6J1DSJ4 signal peptide peptidase-like 2 isoform X23.2e-2298.08Show/hide
Query:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFI V
Subjt:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

A0A6J1DVK0 signal peptide peptidase-like 2 isoform X12.5e-2298.08Show/hide
Query:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFI V
Subjt:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

A0A6J1EMV4 signal peptide peptidase-like 2 isoform X23.4e-1684.62Show/hide
Query:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        MD QR FLGG  I AL+LLLI +PCHVTAGDIVHHDDLTPKKPGCENDFILV
Subjt:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

A0A6J1I2N6 signal peptide peptidase-like 21.2e-1686.54Show/hide
Query:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        MD QR FLGG AI AL+LLLI +PCHVTAGDIVHHDDLTPKKPGCENDFILV
Subjt:  MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

SwissProt top hitse value%identityAlignment
Q0DWA9 Signal peptide peptidase-like 41.0e-0455.26Show/hide
Query:  ALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        ALLL++         GDIVH DD  PK PGC NDF+LV
Subjt:  ALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

Q0WMJ8 Signal peptide peptidase-like 41.2e-0555Show/hide
Query:  IFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        +F LLL    + C   AGDIVHHDD  P++PGC N+F+LV
Subjt:  IFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

Q5Z413 Signal peptide peptidase-like 54.5e-0558.54Show/hide
Query:  AIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        A+FALL+           GDIVHHDD  PK PGC NDFILV
Subjt:  AIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

Q8W469 Signal peptide peptidase-like 22.1e-0768.57Show/hide
Query:  LLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        +LL+     VTAGDIVH D+L PKKPGCENDF+LV
Subjt:  LLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

Arabidopsis top hitse value%identityAlignment
AT1G01650.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 48.4e-0755Show/hide
Query:  IFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        +F LLL    + C   AGDIVHHDD  P++PGC N+F+LV
Subjt:  IFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

AT1G63690.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 21.5e-0868.57Show/hide
Query:  LLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        +LL+     VTAGDIVH D+L PKKPGCENDF+LV
Subjt:  LLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV

AT1G63690.2 SIGNAL PEPTIDE PEPTIDASE-LIKE 21.5e-0868.57Show/hide
Query:  LLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV
        +LL+     VTAGDIVH D+L PKKPGCENDF+LV
Subjt:  LLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTCAGAGGCATTTTCTTGGTGGGTTGGCCATTTTCGCTCTGCTCTTACTGCTGATTTGTTATCCCTGCCACGTGACGGCTGGGGATATTGTTCATCATGACGA
TTTAACTCCCAAAAAGCCTGGCTGTGAGAATGACTTCATTCTGGTA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTCAGAGGCATTTTCTTGGTGGGTTGGCCATTTTCGCTCTGCTCTTACTGCTGATTTGTTATCCCTGCCACGTGACGGCTGGGGATATTGTTCATCATGACGA
TTTAACTCCCAAAAAGCCTGGCTGTGAGAATGACTTCATTCTGGTA
Protein sequenceShow/hide protein sequence
MDFQRHFLGGLAIFALLLLLICYPCHVTAGDIVHHDDLTPKKPGCENDFILV