; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017731 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017731
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE3 ubiquitin-protein ligase RHA1B
Genome locationscaffold373:1970677..1971246
RNA-Seq ExpressionMS017731
SyntenyMS017731
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579522.1 Brassinosteroid-responsive RING protein 1, partial [Cucurbita argyrosperma subsp. sororia]5.3e-7784.36Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA
        MGFPASYTELLLPKLFIHVLS+LG LRKLI +LFRLLGLQDFLEPDIPWPNQ+D F TGP +DLDP+SAAVLREILPVVKFSELL+PPESCAVCLYEFE+
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA

Query:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSS
        DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIP DLRSG C + D+R+W EDSEIFE L  H DSSSS+  S+
Subjt:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSS

XP_022159549.1 E3 ubiquitin-protein ligase RHA1B [Momordica charantia]1.1e-9595.79Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA
        MGFPASYTELLLPKLFIHVLSLLGLLRKLI VLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA

Query:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSSSSSSSLLTAGS
        DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGD       SSSSSSSLLTAGS
Subjt:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSSSSSSSLLTAGS

XP_022970110.1 E3 ubiquitin-protein ligase RHA1B-like [Cucurbita maxima]1.5e-7683.8Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA
        MGFPASYTELLLPKLFIHVLS+LG LRKLI +LFRLLGLQDFLEPDIPWPNQ+D F TGP +DLDP+SAAVLREILPVVKFSELL+PPESCAVCLYEFE+
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA

Query:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSS
        DDEIR LANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIP DLRSG C + D+R+W EDSEIFE L  H DSSSS+  S+
Subjt:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSS

XP_023549736.1 E3 ubiquitin-protein ligase RHA1B [Cucurbita pepo subsp. pepo]3.1e-7784.44Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA
        MGFPASYTELLLPKLFIHVLS+LG LRKLI +LFRLLGLQDFLEPDIPWPNQ+D F TGP +DLDP+SAAVLREILPVVKFSELL+PPESCAVCLYEFE+
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA

Query:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSSS
        DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIP DLRSG C + D+R+W EDSEIFE L  H DSSSSS+  S+
Subjt:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSSS

XP_038906771.1 E3 ubiquitin-protein ligase RHA1B [Benincasa hispida]1.1e-7984.66Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA
        MGFPASYTELLLPKLFIHVLS LG LRKLI +LFRLLGLQDFLEPDIPWPN  D FPTGP +DLDP+SAAVLREILPVVKFSELL+PPESCAVCLYEFEA
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA

Query:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSSSSSSSLLTAG
        DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIP DLRSGGC + D+R+W EDSEIFE L  H D      SSSSSSSSLL+AG
Subjt:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSSSSSSSLLTAG

TrEMBL top hitse value%identityAlignment
A0A6J1E2N7 E3 ubiquitin-protein ligase RHA1B5.5e-9695.79Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA
        MGFPASYTELLLPKLFIHVLSLLGLLRKLI VLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA

Query:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSSSSSSSLLTAGS
        DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGD       SSSSSSSLLTAGS
Subjt:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSSSSSSSLLTAGS

A0A6J1EQ05 E3 ubiquitin-protein ligase RHA1B3.7e-7683.8Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA
        MGFPASYTELLLPKLFIHVLS+LG LRKLI +LFRLLGLQDFLEPDI WPNQ+D F TGP +DLDP+SAAVLREILPVVKFSELL+PPESCAVCLYEFE+
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA

Query:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSS
        DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIP DLRSG C + D+R+W EDSEIFE L  H DSSSS+  S+
Subjt:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSS

A0A6J1H5J7 E3 ubiquitin-protein ligase RHA1B-like1.1e-7582.78Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA
        MGFPASYTELLLPKLFIHVLSLLG LRKLI +LF LLGLQDFLEPDIPW N +D FPTGP +DLDP+SAAVLREILPVV+FSELL+PPESCAVCLYEFE 
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA

Query:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSSS
        DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIP DLR+GGC + D+R W EDSE+FE L  H DSSSSS+  S+
Subjt:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSSS

A0A6J1I1X7 E3 ubiquitin-protein ligase RHA1B-like7.5e-7783.8Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA
        MGFPASYTELLLPKLFIHVLS+LG LRKLI +LFRLLGLQDFLEPDIPWPNQ+D F TGP +DLDP+SAAVLREILPVVKFSELL+PPESCAVCLYEFE+
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA

Query:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSS
        DDEIR LANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIP DLRSG C + D+R+W EDSEIFE L  H DSSSS+  S+
Subjt:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSS

A0A6J1K664 E3 ubiquitin-protein ligase RHA1B-like1.7e-7680.95Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA
        MGFPASYTELLLPKLFIHVLSLLG LRKLI +LFRLLGLQDFLEPDIPW N +D FPTGP +DLDP+SAAVLREILPVV+FSELL+PPESCAVCLYEFE 
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEA

Query:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSSSSSSSLLTAG
        DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIP DLR+GGC + D+R W EDSE+FE L  H D      SSSSS+ +LL+AG
Subjt:  DDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSSSSSSSLLTAG

SwissProt top hitse value%identityAlignment
Q570X5 RING-H2 finger protein ATL582.4e-1132.76Show/hide
Query:  LIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPES-CAVCLYEFEADDEIRRLANCRHIFHRGCLDRWIGYGQ
        +I  LF L+ L+           +  F P    S ++   +  LRE+LP+V F E     +S C+VCL +++ +D+++++  C+H FH  C+D W+    
Subjt:  LIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPES-CAVCLYEFEADDEIRRLANCRHIFHRGCLDRWIGYGQ

Query:  RTCPLCRTVFIPADLR
         TCPLCR   IP+  R
Subjt:  RTCPLCRTVFIPADLR

Q9LZJ6 RING-H2 finger protein ATL55.8e-1036.76Show/hide
Query:  PTGPSSDLDPVSAAVLREILPVVKFSELL--EPPESCAVCLYEFEADDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERI
        PT  SS L P+   VL +I P+  +S      P E C+VCL EFE DDE R L  C H+FH  C+D W    + +CPLCR    PA   +          
Subjt:  PTGPSSDLDPVSAAVLREILPVVKFSELL--EPPESCAVCLYEFEADDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERI

Query:  WEEDSEIFELLLHHGDSSSSSSSSSSSSSSLLTAGS
         E  + +F  +    D+ + SSSSS  S S   + S
Subjt:  WEEDSEIFELLLHHGDSSSSSSSSSSSSSSLLTAGS

Q9SUS4 Probable E3 ubiquitin-protein ligase RHA1A4.7e-2035.93Show/hide
Query:  MGFPASY-TELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLE------PDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSEL-LEPPESCA
        MG P  + TEL +P   + +L ++G  R ++  L   +GL  FL+      PD+             +      SA++  E++PVV+FS+L  +P + C 
Subjt:  MGFPASY-TELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLE------PDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSEL-LEPPESCA

Query:  VCLYEFEADDEIRRLANCRHIFHRGCLDRWI-GYGQRTCPLCRTVFIP------ADLRSGGCSDSDE
        VCL +FE+DD++R+L  C H+FH  CLDRWI  Y +  CP+CR  F+P      +D  SG    SDE
Subjt:  VCLYEFEADDEIRRLANCRHIFHRGCLDRWI-GYGQRTCPLCRTVFIP------ADLRSGGCSDSDE

Q9SUS5 E3 ubiquitin-protein ligase RHA1B1.2e-2037.76Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPES-CAVCLYEFE
        MG P  + EL +P   +  L ++G  R ++  L   +GL  FL+ +       +   + P+      SA +  E++PVV+FS+LL  PE  C VCL +F 
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPES-CAVCLYEFE

Query:  ADDEIRRLANCRHIFHRGCLDRWI-GYGQRTCPLCRTVFIPAD
        +DD+IR+L  C H+FH  CLDRWI    + TCP+CR  F+P +
Subjt:  ADDEIRRLANCRHIFHRGCLDRWI-GYGQRTCPLCRTVFIPAD

Q9XF92 Brassinosteroid-responsive RING protein 11.6e-4453.46Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELL----EPPESCAVCLY
        MGFP  YTE+ LPKLF+  LS+LG +R ++F +FR LGL DFLE D  WP+    +PT       P SA ++REILPV+KF EL     + PE+CAVCLY
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELL----EPPESCAVCLY

Query:  EFEADDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIW
        EFE + EIR L NCRHIFHR CLDRW+ + Q+TCPLCRT F+P +++     + ++R+W
Subjt:  EFEADDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIW

Arabidopsis top hitse value%identityAlignment
AT1G63840.1 RING/U-box superfamily protein9.7e-4554.8Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLR-EILPVVKFSELLEP-PESCAVCLYEF
        MGFP  Y+ELLLPK+F ++LS LGL+RKLI  +F+++GL DFLEP+      +  +P  P +   P SAA+L  E+LPVV+FS++  P  E CAVCLY+F
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLR-EILPVVKFSELLEP-PESCAVCLYEF

Query:  EADDEIRRLANCRHIFHRGCLDRW-IGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSS
        E DDEIRRL NCRHIFHRGCLDRW +GY Q TCPLCRT FIP  L+     + ++R+W + S +   LL   D SSS
Subjt:  EADDEIRRLANCRHIFHRGCLDRW-IGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSS

AT3G61460.1 brassinosteroid-responsive RING-H21.1e-4553.46Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELL----EPPESCAVCLY
        MGFP  YTE+ LPKLF+  LS+LG +R ++F +FR LGL DFLE D  WP+    +PT       P SA ++REILPV+KF EL     + PE+CAVCLY
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELL----EPPESCAVCLY

Query:  EFEADDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIW
        EFE + EIR L NCRHIFHR CLDRW+ + Q+TCPLCRT F+P +++     + ++R+W
Subjt:  EFEADDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIW

AT4G11360.1 RING-H2 finger A1B8.9e-2237.76Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPES-CAVCLYEFE
        MG P  + EL +P   +  L ++G  R ++  L   +GL  FL+ +       +   + P+      SA +  E++PVV+FS+LL  PE  C VCL +F 
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPES-CAVCLYEFE

Query:  ADDEIRRLANCRHIFHRGCLDRWI-GYGQRTCPLCRTVFIPAD
        +DD+IR+L  C H+FH  CLDRWI    + TCP+CR  F+P +
Subjt:  ADDEIRRLANCRHIFHRGCLDRWI-GYGQRTCPLCRTVFIPAD

AT4G11370.1 RING-H2 finger A1A3.4e-2135.93Show/hide
Query:  MGFPASY-TELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLE------PDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSEL-LEPPESCA
        MG P  + TEL +P   + +L ++G  R ++  L   +GL  FL+      PD+             +      SA++  E++PVV+FS+L  +P + C 
Subjt:  MGFPASY-TELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLE------PDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSEL-LEPPESCA

Query:  VCLYEFEADDEIRRLANCRHIFHRGCLDRWI-GYGQRTCPLCRTVFIP------ADLRSGGCSDSDE
        VCL +FE+DD++R+L  C H+FH  CLDRWI  Y +  CP+CR  F+P      +D  SG    SDE
Subjt:  VCLYEFEADDEIRRLANCRHIFHRGCLDRWI-GYGQRTCPLCRTVFIP------ADLRSGGCSDSDE

AT5G41400.1 RING/U-box superfamily protein8.5e-4151.12Show/hide
Query:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPT---------GPSSDLDPVSAAVLREILPVVKFSELLEP----
        MG+P  YTELLLP++F+H+LSLLGL+R LI   FR+LGL DFLE D    + +   P            SS   PV+A +  EILPV++FSEL  P    
Subjt:  MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPT---------GPSSDLDPVSAAVLREILPVVKFSELLEP----

Query:  -PESCAVCLYEFEADDEIRRLANCRHIFHRGCLDRW-IGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFE
          + CAVCL+EFE DDEIRRL NC+HIFHR CLDRW +GY Q TCPLCRT FI  +L+       ++R+W E   + E
Subjt:  -PESCAVCLYEFEADDEIRRLANCRHIFHRGCLDRW-IGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCCCTGCGAGCTATACGGAGCTTCTGCTTCCGAAGCTCTTCATCCACGTACTCTCCTTGCTCGGCCTCCTCCGGAAGCTAATTTTCGTCCTCTTCCGCCTTCT
AGGGCTCCAAGATTTCCTCGAACCGGACATTCCATGGCCTAATCAGGCGGATTTCTTCCCGACGGGGCCGTCGTCAGACCTCGATCCAGTCTCCGCCGCCGTCCTGCGCG
AGATTCTGCCGGTGGTGAAGTTCTCGGAGCTTTTGGAGCCGCCGGAGAGCTGCGCCGTGTGCCTGTACGAGTTCGAGGCGGACGACGAGATCCGGCGCCTGGCGAACTGC
CGCCACATATTCCACCGCGGATGCCTCGATCGGTGGATCGGATACGGCCAGAGGACGTGCCCGCTCTGCCGGACGGTGTTTATTCCGGCCGATTTGCGGAGCGGTGGTTG
TAGCGATAGCGACGAGAGGATTTGGGAGGAGGATTCGGAAATCTTTGAACTACTACTCCACCACGGCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGT
CTCTTCTCACCGCTGGTTCG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCCCTGCGAGCTATACGGAGCTTCTGCTTCCGAAGCTCTTCATCCACGTACTCTCCTTGCTCGGCCTCCTCCGGAAGCTAATTTTCGTCCTCTTCCGCCTTCT
AGGGCTCCAAGATTTCCTCGAACCGGACATTCCATGGCCTAATCAGGCGGATTTCTTCCCGACGGGGCCGTCGTCAGACCTCGATCCAGTCTCCGCCGCCGTCCTGCGCG
AGATTCTGCCGGTGGTGAAGTTCTCGGAGCTTTTGGAGCCGCCGGAGAGCTGCGCCGTGTGCCTGTACGAGTTCGAGGCGGACGACGAGATCCGGCGCCTGGCGAACTGC
CGCCACATATTCCACCGCGGATGCCTCGATCGGTGGATCGGATACGGCCAGAGGACGTGCCCGCTCTGCCGGACGGTGTTTATTCCGGCCGATTTGCGGAGCGGTGGTTG
TAGCGATAGCGACGAGAGGATTTGGGAGGAGGATTCGGAAATCTTTGAACTACTACTCCACCACGGCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGT
CTCTTCTCACCGCTGGTTCG
Protein sequenceShow/hide protein sequence
MGFPASYTELLLPKLFIHVLSLLGLLRKLIFVLFRLLGLQDFLEPDIPWPNQADFFPTGPSSDLDPVSAAVLREILPVVKFSELLEPPESCAVCLYEFEADDEIRRLANC
RHIFHRGCLDRWIGYGQRTCPLCRTVFIPADLRSGGCSDSDERIWEEDSEIFELLLHHGDSSSSSSSSSSSSSSLLTAGS