CuGenDBv2

Gene ID	MS017737
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	SnoaL-like domain-containing protein
Genome location	scaffold373:2027644..2028871
RNA-Seq Expression	MS017737
Synteny	MS017737
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	IPR032710 - NTF2-like domain superfamily IPR037401 - SnoaL-like domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022156726.1 uncharacterized protein LOC111023569 isoform X1 [Momordica charantia]

5.5e-121

98.66

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Query:  MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEE
        MALIRSPPPISLGSQSFRNLPYTALPKI+SCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCL DDSDSCLDSNSNP SEMIENFYRCINEKNLEE
Subjt:  MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEE

Query:  LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK
        LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK
Subjt:  LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK

Query:  AGHFILALLKLVTSLLDTFPAIPE
        AGHFILALLKLVTSLLDTFPAIPE
Subjt:  AGHFILALLKLVTSLLDTFPAIPE

XP_022156730.1 uncharacterized protein LOC111023569 isoform X2 [Momordica charantia]

5.5e-121

98.66

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Query:  MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEE
        MALIRSPPPISLGSQSFRNLPYTALPKI+SCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCL DDSDSCLDSNSNP SEMIENFYRCINEKNLEE
Subjt:  MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEE

Query:  LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK
        LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK
Subjt:  LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK

Query:  AGHFILALLKLVTSLLDTFPAIPE
        AGHFILALLKLVTSLLDTFPAIPE
Subjt:  AGHFILALLKLVTSLLDTFPAIPE

XP_022156737.1 uncharacterized protein LOC111023569 isoform X3 [Momordica charantia]

3.9e-111

98.54

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Query:  MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEE
        MALIRSPPPISLGSQSFRNLPYTALPKI+SCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCL DDSDSCLDSNSNP SEMIENFYRCINEKNLEE
Subjt:  MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEE

Query:  LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK
        LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK
Subjt:  LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK

Query:  AGHFIL
        AGHFIL
Subjt:  AGHFIL

XP_023550969.1 uncharacterized protein LOC111808949 [Cucurbita pepo subsp. pepo]

1.2e-67

63.84

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Query:  MALIRSPPP--ISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNL
        MALI SPPP  ++LGSQ FR   YT++PK  S +FQQKK         +RKT+   +T+VK RFV SCL D S   LDS S  PSEM+   Y CINEK L
Subjt:  MALIRSPPP--ISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNL

Query:  EELGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQ
        +EL SY+SEDC+IEDSLF EPF G++ AL+FFEELTQSMGR VKFR  NVYESGTS AGA W L WK+ +IPF+KGCTFI+I NE +R IQKAQII+EPQ
Subjt:  EELGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQ

Query:  VKAGHFILALLKLVTSLLDTFPAI
        VKAGH IL ++KLVTSLL  +PAI
Subjt:  VKAGHFILALLKLVTSLLDTFPAI

XP_038906943.1 uncharacterized protein LOC120092809 [Benincasa hispida]

1.1e-73

66.81

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Query:  MALIRSPPP---ISL-GSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDW-MRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINE
        M+LI SPPP   ++L GSQS R    T L K +SC+ QQKK     YG+   +KTN R STDVKL FV SCL DDS S LDS SN PSEMIE FY+CINE
Subjt:  MALIRSPPP---ISL-GSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDW-MRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINE

Query:  KNLEELGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIV
        KNL+EL SYISEDC IEDSLF+EPF G+K AL FFEELT SMG  VKFRI N+YE   S  GAIW L WK++EIPF+KGCTFI+IRNE+R+ IQKAQII+
Subjt:  KNLEELGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIV

Query:  EPQVKAGHFILALLKLVTSLLDTFPAIPE
        EPQ+KAGH ILA++KLVT LL  +PAIPE
Subjt:  EPQVKAGHFILALLKLVTSLLDTFPAIPE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DR56 uncharacterized protein LOC111023569 isoform X2

2.6e-121

98.66

Show/hide

Query:  MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEE
        MALIRSPPPISLGSQSFRNLPYTALPKI+SCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCL DDSDSCLDSNSNP SEMIENFYRCINEKNLEE
Subjt:  MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEE

Query:  LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK
        LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK
Subjt:  LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK

Query:  AGHFILALLKLVTSLLDTFPAIPE
        AGHFILALLKLVTSLLDTFPAIPE
Subjt:  AGHFILALLKLVTSLLDTFPAIPE

A0A6J1DSR1 uncharacterized protein LOC111023569 isoform X3

1.9e-111

98.54

Show/hide

Query:  MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEE
        MALIRSPPPISLGSQSFRNLPYTALPKI+SCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCL DDSDSCLDSNSNP SEMIENFYRCINEKNLEE
Subjt:  MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEE

Query:  LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK
        LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK
Subjt:  LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK

Query:  AGHFIL
        AGHFIL
Subjt:  AGHFIL

A0A6J1DVV2 uncharacterized protein LOC111023569 isoform X1

2.6e-121

98.66

Show/hide

Query:  MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEE
        MALIRSPPPISLGSQSFRNLPYTALPKI+SCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCL DDSDSCLDSNSNP SEMIENFYRCINEKNLEE
Subjt:  MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEE

Query:  LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK
        LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK
Subjt:  LGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVK

Query:  AGHFILALLKLVTSLLDTFPAIPE
        AGHFILALLKLVTSLLDTFPAIPE
Subjt:  AGHFILALLKLVTSLLDTFPAIPE

A0A6J1ELY0 uncharacterized protein LOC111435747

4.2e-66

62.5

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Query:  MALIRSPPP--ISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNL
        MALI SPPP  ++LGSQ FR   YT++PK  S +FQQKK         +RKT+   +TDVK RFV SCL D S   LDS SN PSEM++  Y CINEK L
Subjt:  MALIRSPPP--ISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNL

Query:  EELGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQ
        +EL SY+SEDC+IEDSLF E F G++ AL+FF+ELTQSMG  VKFR  NVYESG S AG  W L WK+ +IPF+KGCTFI+I NE +R IQKAQII+EPQ
Subjt:  EELGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQ

Query:  VKAGHFILALLKLVTSLLDTFPAI
        VKAGH IL ++KLVTSLL  +PAI
Subjt:  VKAGHFILALLKLVTSLLDTFPAI

A0A6J1I4H1 uncharacterized protein LOC111469081

1.7e-67

64.29

Show/hide

Query:  MALIRSPPP--ISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNL
        MALI SPPP  ++LGSQ FR   YT++PK  S +FQQKK         +RKT+    TDVK RFV SCL D S   LDS SN PSEM++ FY CINEK L
Subjt:  MALIRSPPP--ISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNL

Query:  EELGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQ
        +EL SYISEDC+IEDSLF E F G++ AL+FF+ELTQSMG  VKFR  NVYESGTS AGA W L WK+ +IPF+KGCTFI+I NE+ R IQKAQII+EPQ
Subjt:  EELGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQ

Query:  VKAGHFILALLKLVTSLLDTFPAI
        VKAGH IL ++KLVTSLL  +PAI
Subjt:  VKAGHFILALLKLVTSLLDTFPAI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G71480.1 Nuclear transport factor 2 (NTF2) family protein

1.6e-22

37.06

Show/hide

Query:  SEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIR-
        SE++ +FY  +N  +L  +   I++DCV ED +F  PF GRK  L+FF +  +S    ++F I ++    +S  G  W L WK    PFSKGC+F  +  
Subjt:  SEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIR-

Query:  NEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE
         + +R I   +  VEP +K G  +LA +K VT LL  FP + +
Subjt:  NEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPE

AT5G41470.1 Nuclear transport factor 2 (NTF2) family protein

4.3e-31

44.81

Show/hide

Query:  SCLDSNSNPPSEM-----IENFYRCINEKNLEELGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDI
        SCLD  ++ P+++     +  FY  INEKN ++L S IS DC I+D  F +PF+G++EA+EFFEEL +SMG+ VKF + NV E     A   W L WK  
Subjt:  SCLDSNSNPPSEM-----IENFYRCINEKNLEELGSYISEDCVIEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDI

Query:  EIPFSKGCTFINIRNE-KRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFP
        +IPF++GC+F    +E  R  I+ A+I++E  +K G   L+LLK +T L D FP
Subjt:  EIPFSKGCTFINIRNE-KRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCCTTATAAGAAGTCCTCCTCCCATCAGTTTGGGCTCCCAATCATTCAGAAATCTACCCTATACAGCCTTGCCTAAAATAACCTCATGTGTATTTCAACAAAAGAA
GACCACAGTACTAAAATATGGCGACTGGATGAGGAAAACAAACAAAAGATCATCCACTGACGTTAAGCTCCGTTTCGTGCCTTCGTGTTTAACAGATGATTCTGATTCCT
GCTTAGATTCAAATTCAAATCCTCCATCAGAAATGATTGAGAACTTCTACAGATGCATCAATGAAAAAAACTTAGAGGAGTTGGGCAGTTACATCTCAGAAGATTGTGTC
ATTGAAGACTCCTTGTTCATTGAACCATTTCAAGGGAGGAAGGAAGCTCTGGAGTTCTTTGAAGAACTCACTCAAAGCATGGGCCGATATGTGAAGTTCAGAATTCTTAA
CGTCTACGAAAGTGGCACTTCCGGTGCAGGAGCAATCTGGCGCTTGGCATGGAAGGACATAGAGATTCCCTTCTCCAAGGGCTGCACCTTCATCAACATCAGAAATGAAA
AAAGAAGAGCAATACAGAAAGCACAAATCATAGTTGAACCACAAGTCAAAGCAGGACATTTCATCTTGGCTTTACTGAAGCTTGTGACTTCATTACTCGATACATTTCCA
GCAATTCCAGAATGTAAGTCG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MALIRSPPPISLGSQSFRNLPYTALPKITSCVFQQKKTTVLKYGDWMRKTNKRSSTDVKLRFVPSCLTDDSDSCLDSNSNPPSEMIENFYRCINEKNLEELGSYISEDCV
IEDSLFIEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFINIRNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFP
AIPECKS

MS017737 (gene) of Bitter gourd (TR) v1 genome