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MS017748 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017748
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHMA domain-containing protein
Genome locationscaffold373:2136475..2136600
RNA-Seq ExpressionMS017748
SyntenyMS017748
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579369.1 Heavy metal-associated isoprenylated plant protein 12, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0778.57Show/hide
Query:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV
        +AGVNSISM+MKEKK+TV G+VDPV +V+KLRKIC+TVIVSV
Subjt:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV

KAG7016852.1 Heavy metal-associated isoprenylated plant protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-0878.57Show/hide
Query:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV
        +AGVNSISM+MKEKK+TV G+VDPV +V+KLRKIC+TVIVSV
Subjt:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV

XP_022156754.1 heavy metal-associated isoprenylated plant protein 39-like [Momordica charantia]1.7e-0776.19Show/hide
Query:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV
        ++GVNSIS++MKEKK+TV G+VDPVGLV KLRK C+TVIVSV
Subjt:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV

XP_022922258.1 heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata]1.3e-0778.57Show/hide
Query:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV
        +AGVNSISM+MKEKK+TV G+VDPV +V+KLRKIC+TVIVSV
Subjt:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV

XP_022973069.1 heavy metal-associated isoprenylated plant protein 39-like [Cucurbita maxima]1.3e-0778.57Show/hide
Query:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV
        +AGVNSISM+MKEKK+TV G+VDPV +V+KLRKIC+TVIVSV
Subjt:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV

TrEMBL top hitse value%identityAlignment
A0A5D3C3P0 FK506-binding protein 4-like4.0e-0773.81Show/hide
Query:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV
        ++GVNSISM+MKEKK+TV G+VDPV +V+KLRKIC+T IVSV
Subjt:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV

A0A6J1DUI0 heavy metal-associated isoprenylated plant protein 39-like8.1e-0876.19Show/hide
Query:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV
        ++GVNSIS++MKEKK+TV G+VDPVGLV KLRK C+TVIVSV
Subjt:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV

A0A6J1E630 heavy metal-associated isoprenylated plant protein 39-like6.2e-0878.57Show/hide
Query:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV
        +AGVNSISM+MKEKK+TV G+VDPV +V+KLRKIC+TVIVSV
Subjt:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV

A0A6J1IDG3 heavy metal-associated isoprenylated plant protein 39-like6.2e-0878.57Show/hide
Query:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV
        +AGVNSISM+MKEKK+TV G+VDPV +V+KLRKIC+TVIVSV
Subjt:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV

E5GBD2 Metal ion binding protein4.0e-0773.81Show/hide
Query:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV
        ++GVNSISM+MKEKK+TV G+VDPV +V+KLRKIC+T IVSV
Subjt:  VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV

SwissProt top hitse value%identityAlignment
O03982 Heavy metal-associated isoprenylated plant protein 391.4e-0467.74Show/hide
Query:  GVNSISMNMKEKKMTVRGNVDPVGLVNKLRK
        G++SI+M+MKEKK+TV G VDPV +V+KLRK
Subjt:  GVNSISMNMKEKKMTVRGNVDPVGLVNKLRK

Q9LTE2 Heavy metal-associated isoprenylated plant protein 138.9e-0460Show/hide
Query:  GVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV
        GV SI+M+ K  KMTV G VD   +V KLRK+CNT +VSV
Subjt:  GVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV

Arabidopsis top hitse value%identityAlignment
AT1G01490.1 Heavy metal transport/detoxification superfamily protein9.8e-0667.74Show/hide
Query:  GVNSISMNMKEKKMTVRGNVDPVGLVNKLRK
        G++SI+M+MKEKK+TV G VDPV +V+KLRK
Subjt:  GVNSISMNMKEKKMTVRGNVDPVGLVNKLRK

AT1G01490.2 Heavy metal transport/detoxification superfamily protein9.8e-0667.74Show/hide
Query:  GVNSISMNMKEKKMTVRGNVDPVGLVNKLRK
        G++SI+M+MKEKK+TV G VDPV +V+KLRK
Subjt:  GVNSISMNMKEKKMTVRGNVDPVGLVNKLRK

AT5G52750.1 Heavy metal transport/detoxification superfamily protein6.3e-0560Show/hide
Query:  GVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV
        GV SI+M+ K  KMTV G VD   +V KLRK+CNT +VSV
Subjt:  GVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV

AT5G52760.1 Copper transport protein family1.8e-0458.54Show/hide
Query:  AGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV
        +GV SI+M+ K  KMT+ G VD   +V KLRK+CNT IVSV
Subjt:  AGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGCAGGAGTGAACTCAATCTCCATGAACATGAAAGAGAAGAAAATGACAGTAAGAGGGAATGTGGATCCAGTGGGCCTGGTGAACAAACTAAGGAAGATTTGCAACAC
AGTGATAGTTTCAGTT
mRNA sequenceShow/hide mRNA sequence
GTTGCAGGAGTGAACTCAATCTCCATGAACATGAAAGAGAAGAAAATGACAGTAAGAGGGAATGTGGATCCAGTGGGCCTGGTGAACAAACTAAGGAAGATTTGCAACAC
AGTGATAGTTTCAGTT
Protein sequenceShow/hide protein sequence
VAGVNSISMNMKEKKMTVRGNVDPVGLVNKLRKICNTVIVSV