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MS017765 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017765
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin-responsive protein
Genome locationscaffold373:2339911..2340382
RNA-Seq ExpressionMS017765
SyntenyMS017765
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647912.1 hypothetical protein Csa_000649 [Cucumis sativus]3.3e-3070.48Show/hide
Query:  PPVRSYRKNAIIEAGKKKE----MNKESG--SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLV
        PPVRSYRKN IIE  +KK+    +N E G  SG+YVKVS+DGAPYLRKIDLK Y  YQQLLD LE+MFNFK G++SERE Y G D VL YEDKDGDWM+V
Subjt:  PPVRSYRKNAIIEAGKKKE----MNKESG--SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLV

Query:  GDVSW
        GDV W
Subjt:  GDVSW

KAG6579385.1 Auxin-induced protein 22D, partial [Cucurbita argyrosperma subsp. sororia]3.3e-3074.76Show/hide
Query:  PPVRSYRKNAIIEAGKK--KE-MNKESG-SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGD
        PPVRSY KN IIEA KK  KE MNKE G SG+YVKVS+DGAPYLRKIDLK Y SYQQLLD LE+MFN K G +SEREG + C+ VL YEDKDGDWM+VGD
Subjt:  PPVRSYRKNAIIEAGKK--KE-MNKESG-SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGD

Query:  VSW
        V W
Subjt:  VSW

KAG7016865.1 Auxin-induced protein 22B, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-3074.76Show/hide
Query:  PPVRSYRKNAIIEAGKK--KE-MNKESG-SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGD
        PPVRSY KN IIEA KK  KE MNKE G SG+YVKVS+DGAPYLRKIDLK Y SYQQLLD LE+MFN K G +SEREG + C+ VL YEDKDGDWM+VGD
Subjt:  PPVRSYRKNAIIEAGKK--KE-MNKESG-SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGD

Query:  VSW
        V W
Subjt:  VSW

XP_008436982.2 PREDICTED: auxin-induced protein 22D-like [Cucumis melo]3.3e-3068.18Show/hide
Query:  PPVRSYRKNAIIEAGKKKE---------MNKESG--SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDG
        PPVRSYRKN IIE  KKK+         +N E G  SG+YVKVS+DGAPYLRKIDLK Y  YQQLLD LE MFNFK G++SEREGY G D V  YEDKDG
Subjt:  PPVRSYRKNAIIEAGKKKE---------MNKESG--SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDG

Query:  DWMLVGDVSW
        DWM+VGDV W
Subjt:  DWMLVGDVSW

XP_038907066.1 auxin-induced protein 22D-like [Benincasa hispida]9.3e-3373.08Show/hide
Query:  PPVRSYRKNAIIEAGKKKE--MNKESG--SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGD
        PPVRSYRKN IIE  KKK+  +N E G  SG+YVKVS+DGAPYLRK+DLK Y SYQQLLD LE+MFNFK G+ SEREGY GCD V  YEDKDGDWM+VGD
Subjt:  PPVRSYRKNAIIEAGKKKE--MNKESG--SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGD

Query:  VSWE
        V W+
Subjt:  VSWE

TrEMBL top hitse value%identityAlignment
A0A0A0KKT1 Auxin-responsive protein1.6e-3070.48Show/hide
Query:  PPVRSYRKNAIIEAGKKKE----MNKESG--SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLV
        PPVRSYRKN IIE  +KK+    +N E G  SG+YVKVS+DGAPYLRKIDLK Y  YQQLLD LE+MFNFK G++SERE Y G D VL YEDKDGDWM+V
Subjt:  PPVRSYRKNAIIEAGKKKE----MNKESG--SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLV

Query:  GDVSW
        GDV W
Subjt:  GDVSW

A0A1S3ASK8 Auxin-responsive protein1.6e-3068.18Show/hide
Query:  PPVRSYRKNAIIEAGKKKE---------MNKESG--SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDG
        PPVRSYRKN IIE  KKK+         +N E G  SG+YVKVS+DGAPYLRKIDLK Y  YQQLLD LE MFNFK G++SEREGY G D V  YEDKDG
Subjt:  PPVRSYRKNAIIEAGKKKE---------MNKESG--SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDG

Query:  DWMLVGDVSW
        DWM+VGDV W
Subjt:  DWMLVGDVSW

A0A6J1E2U9 Auxin-responsive protein1.0e-2972.82Show/hide
Query:  PPVRSYRKNAIIEAGKK--KE-MNKESG-SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGD
        PPVRSY KN IIEA KK  KE MNKE G SG+YVKVS+DGAPYLRKIDLK Y SYQQLLD LE+MFN K G +SE+EG + C+  L YEDKDGDWM+VGD
Subjt:  PPVRSYRKNAIIEAGKK--KE-MNKESG-SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGD

Query:  VSW
        V W
Subjt:  VSW

A0A6J1IBP3 Auxin-responsive protein7.9e-3073.79Show/hide
Query:  PPVRSYRKNAIIEAGKK--KE-MNKESGSG-IYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGD
        PPVRSY KN IIEA KK  KE MNKE GS  +YVKVS+DGAPYLRKIDLK Y SYQQLLD LE+MFN K G +SEREG + C+ VL YEDKDGDWM+VGD
Subjt:  PPVRSYRKNAIIEAGKK--KE-MNKESGSG-IYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGD

Query:  VSW
        V W
Subjt:  VSW

E5GCU3 Auxin-responsive protein1.6e-3068.18Show/hide
Query:  PPVRSYRKNAIIEAGKKKE---------MNKESG--SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDG
        PPVRSYRKN IIE  KKK+         +N E G  SG+YVKVS+DGAPYLRKIDLK Y  YQQLLD LE MFNFK G++SEREGY G D V  YEDKDG
Subjt:  PPVRSYRKNAIIEAGKKKE---------MNKESG--SGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDG

Query:  DWMLVGDVSW
        DWM+VGDV W
Subjt:  DWMLVGDVSW

SwissProt top hitse value%identityAlignment
O24542 Auxin-induced protein 22D6.1e-2761.62Show/hide
Query:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSW
        PP+RSYRKN +    ++K+  +  G+G+YVKVSM GAPYLRKIDLK Y SY +LL  LENMF    G+ SEREGY+G +    YEDKDGDWMLVGDV W
Subjt:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSW

O24543 Auxin-induced protein 22E5.1e-2657.58Show/hide
Query:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSW
        PP+RS+RKN++    ++K++ +  G+G+Y+KVSM GAPYLRKIDLK Y SY +LL  L+N+F    G+ SEREGY+G +    YEDKDGDWMLVGDV W
Subjt:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSW

P32294 Auxin-induced protein 22B5.1e-2659Show/hide
Query:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE
        PP+RSYRKN++ E           G GI+VKVSMDGAPYLRK+DLK Y  Y +LL  LE MF    G+ SEREGY G +    YEDKDGDWMLVGDV W+
Subjt:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE

P33077 Auxin-responsive protein IAA42.7e-2762Show/hide
Query:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDL-KYHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE
        PPVRSYRKN +     + + ++  G G YVKVSMDGAPYLRKIDL  Y  Y +L+ +LENMF F  G+  EREGY G D V  YEDKDGDWMLVGDV WE
Subjt:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDL-KYHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE

Q38822 Auxin-responsive protein IAA37.2e-2864Show/hide
Query:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE
        PPVRSYRKN I     KK  ++  G GIYVKVSMDGAPYLRKIDL  Y  Y +LL  LE MF F  G+  ER+GY G D V  YEDKDGDWML+GDV WE
Subjt:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE

Arabidopsis top hitse value%identityAlignment
AT1G04240.1 AUX/IAA transcriptional regulator family protein5.1e-2964Show/hide
Query:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE
        PPVRSYRKN I     KK  ++  G GIYVKVSMDGAPYLRKIDL  Y  Y +LL  LE MF F  G+  ER+GY G D V  YEDKDGDWML+GDV WE
Subjt:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE

AT3G23030.1 indole-3-acetic acid inducible 26.4e-2459Show/hide
Query:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE
        PPVRS RKN              + S  YVKVSMDGAPYLRKIDLK Y +Y +LL  LENMF    G+  EREGY G   V  YEDKDGDWMLVGDV W+
Subjt:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE

AT4G14560.1 indole-3-acetic acid inducible4.5e-2562Show/hide
Query:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE
        PPVRS RKN           N ++ S  YVKVSMDGAPYLRKIDLK Y +Y +LL  LENMF F  G+ SEREGY G   V  YEDKDGDWMLVGDV W+
Subjt:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE

AT5G43700.1 AUX/IAA transcriptional regulator family protein1.9e-2862Show/hide
Query:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDL-KYHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE
        PPVRSYRKN +     + + ++  G G YVKVSMDGAPYLRKIDL  Y  Y +L+ +LENMF F  G+  EREGY G D V  YEDKDGDWMLVGDV WE
Subjt:  PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDL-KYHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE

AT5G65670.1 indole-3-acetic acid inducible 98.7e-2150.43Show/hide
Query:  PPVRSYRKNAIIEAGKKK-EMNKESGSG-IYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMF----------NFKHGK-----SSEREGYSGCDCVLA
        PPVRSYRKN +    K   E++   GSG ++VKVSMDGAPYLRK+DL+ Y +Y +L   LE MF          N   GK     +  ++  +G D VL 
Subjt:  PPVRSYRKNAIIEAGKKK-EMNKESGSG-IYVKVSMDGAPYLRKIDLK-YHSYQQLLDTLENMF----------NFKHGK-----SSEREGYSGCDCVLA

Query:  YEDKDGDWMLVGDVSWE
        YEDKDGDWMLVGDV WE
Subjt:  YEDKDGDWMLVGDVSWE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCACCAGTGAGATCTTACAGGAAAAATGCGATAATTGAAGCAGGGAAGAAGAAGGAGATGAATAAGGAATCAGGGAGTGGAATTTATGTGAAAGTGAGCATGGATGGAGC
TCCATACCTGAGGAAGATTGATCTCAAATACCACAGCTATCAACAGCTTTTGGATACCTTGGAAAACATGTTCAACTTCAAACATGGTAAATCTTCAGAGAGAGAAGGAT
ACAGTGGGTGTGATTGTGTTCTAGCTTATGAAGATAAAGATGGTGATTGGATGCTGGTCGGAGATGTTTCATGGGAG
mRNA sequenceShow/hide mRNA sequence
CCACCAGTGAGATCTTACAGGAAAAATGCGATAATTGAAGCAGGGAAGAAGAAGGAGATGAATAAGGAATCAGGGAGTGGAATTTATGTGAAAGTGAGCATGGATGGAGC
TCCATACCTGAGGAAGATTGATCTCAAATACCACAGCTATCAACAGCTTTTGGATACCTTGGAAAACATGTTCAACTTCAAACATGGTAAATCTTCAGAGAGAGAAGGAT
ACAGTGGGTGTGATTGTGTTCTAGCTTATGAAGATAAAGATGGTGATTGGATGCTGGTCGGAGATGTTTCATGGGAG
Protein sequenceShow/hide protein sequence
PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLKYHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE