; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017772 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017772
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionActin-depolymerizing factor
Genome locationscaffold373:2422778..2423794
RNA-Seq ExpressionMS017772
SyntenyMS017772
Gene Ontology termsGO:0030042 - actin filament depolymerization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR002108 - Actin-depolymerising factor homology domain
IPR017904 - ADF/Cofilin
IPR029006 - ADF-H/Gelsolin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579390.1 Oxalate--CoA ligase, partial [Cucurbita argyrosperma subsp. sororia]1.5e-6593.38Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
        ANAASGMAVRDECKLKFLELKAKRNYRFI FKI++QEVV+DKLGKP+ TYEDFTGSLP+DECRYAVFDFDFITDEN QKSKIFFIAWSPDISKVRSKMVY
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY

Query:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
        ASSKDRFKRELDGIQFELQATDPSEMSFDIVK+RAF
Subjt:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF

XP_004152385.2 actin-depolymerizing factor 7 [Cucumis sativus]1.4e-6695.59Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
        ANAASGMAVRDECKLKFLELKAKRNYRFIIFKI+QQEVVV+KLG+P+ETYEDFTGSLP+DECRYAVFDFDFITDEN QKSKIFFIAWSPDISKVRSKMVY
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY

Query:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
        ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
Subjt:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF

XP_008437023.1 PREDICTED: actin-depolymerizing factor 7 [Cucumis melo]1.0e-6695.59Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
        ANAASGMAVRDECKLKFLELKAKRNYRFIIFKI+QQEVVV+KLG+P+ETYEDFTGSLP+DECRYAVFDFDFITDEN QKSKIFFIAWSPDISKVRSKMVY
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY

Query:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
        ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
Subjt:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF

XP_022159651.1 actin-depolymerizing factor 7 [Momordica charantia]2.9e-69100Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
        ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY

Query:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
        ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
Subjt:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF

XP_022995817.1 actin-depolymerizing factor 7 [Cucurbita maxima]5.7e-6592.65Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
        AN+ASGM VRDECKLKFLELKAKRNYRFIIFKI+QQE+VV+KLGKPEETYEDFTGSLP+DECRYAVFDFDFITDEN QKSKIFFIAWSP+ SKVR KMVY
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY

Query:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
        ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
Subjt:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF

TrEMBL top hitse value%identityAlignment
A0A0A0KKY8 ADF-H domain-containing protein6.5e-6795.59Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
        ANAASGMAVRDECKLKFLELKAKRNYRFIIFKI+QQEVVV+KLG+P+ETYEDFTGSLP+DECRYAVFDFDFITDEN QKSKIFFIAWSPDISKVRSKMVY
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY

Query:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
        ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
Subjt:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF

A0A1S3ATL2 actin-depolymerizing factor 75.0e-6795.59Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
        ANAASGMAVRDECKLKFLELKAKRNYRFIIFKI+QQEVVV+KLG+P+ETYEDFTGSLP+DECRYAVFDFDFITDEN QKSKIFFIAWSPDISKVRSKMVY
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY

Query:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
        ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
Subjt:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF

A0A5A7TKY7 Actin-depolymerizing factor 75.0e-6795.59Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
        ANAASGMAVRDECKLKFLELKAKRNYRFIIFKI+QQEVVV+KLG+P+ETYEDFTGSLP+DECRYAVFDFDFITDEN QKSKIFFIAWSPDISKVRSKMVY
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY

Query:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
        ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
Subjt:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF

A0A6J1E4K0 actin-depolymerizing factor 71.4e-69100Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
        ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY

Query:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
        ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
Subjt:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF

A0A6J1K020 actin-depolymerizing factor 72.8e-6592.65Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
        AN+ASGM VRDECKLKFLELKAKRNYRFIIFKI+QQE+VV+KLGKPEETYEDFTGSLP+DECRYAVFDFDFITDEN QKSKIFFIAWSP+ SKVR KMVY
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY

Query:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
        ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
Subjt:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF

SwissProt top hitse value%identityAlignment
Q67ZM4 Actin-depolymerizing factor 73.6e-6285.93Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
        ANAASGMAV DECKLKFLELK+KRNYRFIIF+ID Q+VVV+KLG P+ETY+DFT SLP++ECRYAVFDFDFITDEN QKSKIFFIAWSPD S+VR KMVY
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY

Query:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARA
        ASSKDRFKRELDGIQ ELQATDPSEMSFDI+K+RA
Subjt:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARA

Q6EUH7 Actin-depolymerizing factor 12.7e-5778.83Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKM
        +N+ASGMAV DECKLKFLELKAKR++RFI+FKI++  Q+VVVD+LG+P E+Y+DFT  LP+DECRYAVFDFDF+TDEN QKSKIFFI+W+PD S+VRSKM
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKM

Query:  VYASSKDRFKRELDGIQFELQATDPSEMSFDIVKARA
        +YASSKDRFKRELDGIQ ELQATDPSEMS DIVK+RA
Subjt:  VYASSKDRFKRELDGIQFELQATDPSEMSFDIVKARA

Q7XSN9 Actin-depolymerizing factor 61.2e-5780.29Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKM
        AN+ASGMAV DECKLKF ELK+KR++RFI FKID+  Q+VVVD+LG+P +TY+DFT S+P+ ECRYAVFDFDF+TDEN QKSKIFFI+WSPD SKVRSKM
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKM

Query:  VYASSKDRFKRELDGIQFELQATDPSEMSFDIVKARA
        +YASSKDRFKRELDGIQ ELQATDPSEMS DIVKARA
Subjt:  VYASSKDRFKRELDGIQFELQATDPSEMSFDIVKARA

Q8LFH6 Actin-depolymerizing factor 126.3e-5982.22Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
        ANAASGMAV DECKLKFLELKAKRNYRFIIF+ID Q+VVV+KLG P+E Y+DFT  LP +ECRYAV+DFDF T EN+QKSKIFFIAWSPD S+VR KMVY
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY

Query:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARA
        ASSKDRFKRELDGIQ ELQATDPSEMS DI+K+RA
Subjt:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARA

Q9LQ81 Actin-depolymerizing factor 103.1e-5880.88Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKM
        AN+ASGM V DECKLKFLELKAKRNYRFI+FKID+  Q+V++DKLG PEETYEDFT S+P DECRYAV+D+DF T EN QKSKIFFIAWSPD S+VRSKM
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKM

Query:  VYASSKDRFKRELDGIQFELQATDPSEMSFDIVKAR
        +YASSKDRFKRELDGIQ ELQATDPSEMS DI+K R
Subjt:  VYASSKDRFKRELDGIQFELQATDPSEMSFDIVKAR

Arabidopsis top hitse value%identityAlignment
AT1G01750.1 actin depolymerizing factor 112.2e-5980.88Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKM
        AN+ASGM V DECKLKFLELKAKRNYRFI+FKID+  Q+V++DKLG PEETYEDFT S+P DECRYAV+D+DF T EN QKSKIFFIAWSPD S+VRSKM
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKM

Query:  VYASSKDRFKRELDGIQFELQATDPSEMSFDIVKAR
        +YASSKDRFKRELDGIQ ELQATDPSEMS DI+K R
Subjt:  VYASSKDRFKRELDGIQFELQATDPSEMSFDIVKAR

AT4G00680.1 actin depolymerizing factor 82.7e-5776.47Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKM
        AN+ASGM V DECK+KFLELKAKR YRFI+FKID+  Q+V ++KLG PEETY+DFT S+P DECRYAV+DFDF T++N QKSKIFFIAWSPD S+VRSKM
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQ--QEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKM

Query:  VYASSKDRFKRELDGIQFELQATDPSEMSFDIVKAR
        +YASSKDRFKRE++GIQ ELQATDPSEMS DI+K R
Subjt:  VYASSKDRFKRELDGIQFELQATDPSEMSFDIVKAR

AT4G25590.1 actin depolymerizing factor 72.5e-6385.93Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
        ANAASGMAV DECKLKFLELK+KRNYRFIIF+ID Q+VVV+KLG P+ETY+DFT SLP++ECRYAVFDFDFITDEN QKSKIFFIAWSPD S+VR KMVY
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY

Query:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARA
        ASSKDRFKRELDGIQ ELQATDPSEMSFDI+K+RA
Subjt:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARA

AT5G52360.1 actin depolymerizing factor 104.5e-6082.22Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY
        ANAASGMAV DECKLKFLELKAKRNYRFIIF+ID Q+VVV+KLG P+E Y+DFT  LP +ECRYAV+DFDF T EN+QKSKIFFIAWSPD S+VR KMVY
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVY

Query:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARA
        ASSKDRFKRELDGIQ ELQATDPSEMS DI+K+RA
Subjt:  ASSKDRFKRELDGIQFELQATDPSEMSFDIVKARA

AT5G59890.1 actin depolymerizing factor 44.3e-5572.79Show/hide
Query:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKID--QQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKM
        ANAASGMAV D+CKL+FLELKAKR +RFI++KI+  Q++V+V+K+G+P  TYEDF  SLP+DECRYA++DFDF+T EN QKSKIFFIAW PD++KVRSKM
Subjt:  ANAASGMAVRDECKLKFLELKAKRNYRFIIFKID--QQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKM

Query:  VYASSKDRFKRELDGIQFELQATDPSEMSFDIVKAR
        +YASSKDRFKRELDGIQ ELQATDP+EM  D++K+R
Subjt:  VYASSKDRFKRELDGIQFELQATDPSEMSFDIVKAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGAACGCAGCATCTGGAATGGCCGTTAGAGATGAATGTAAATTGAAGTTTTTGGAGCTAAAAGCAAAGAGAAATTACAGATTCATCATTTTCAAGATCGACCAACAGGA
AGTGGTGGTAGATAAATTGGGAAAACCAGAAGAAACGTATGAAGATTTTACCGGATCTCTTCCATCAGATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTTATTACTG
ATGAGAATGTTCAGAAGAGCAAGATTTTCTTCATTGCATGGTCACCAGACATATCTAAGGTGAGAAGTAAAATGGTGTATGCCAGCTCCAAGGATAGATTCAAAAGAGAA
TTGGATGGCATTCAATTTGAGTTGCAAGCAACAGATCCGAGCGAGATGAGTTTTGACATTGTCAAGGCACGTGCATTT
mRNA sequenceShow/hide mRNA sequence
GCGAACGCAGCATCTGGAATGGCCGTTAGAGATGAATGTAAATTGAAGTTTTTGGAGCTAAAAGCAAAGAGAAATTACAGATTCATCATTTTCAAGATCGACCAACAGGA
AGTGGTGGTAGATAAATTGGGAAAACCAGAAGAAACGTATGAAGATTTTACCGGATCTCTTCCATCAGATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTTATTACTG
ATGAGAATGTTCAGAAGAGCAAGATTTTCTTCATTGCATGGTCACCAGACATATCTAAGGTGAGAAGTAAAATGGTGTATGCCAGCTCCAAGGATAGATTCAAAAGAGAA
TTGGATGGCATTCAATTTGAGTTGCAAGCAACAGATCCGAGCGAGATGAGTTTTGACATTGTCAAGGCACGTGCATTT
Protein sequenceShow/hide protein sequence
ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPSDECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRE
LDGIQFELQATDPSEMSFDIVKARAF