; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS017780 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017780
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionlow-temperature-induced 65 kDa protein-like
Genome locationscaffold373:2480983..2482222
RNA-Seq ExpressionMS017780
SyntenyMS017780
Gene Ontology termsGO:0009737 - response to abscisic acid (biological process)
InterPro domainsIPR037491 - Low-temperature-induced 78kDa/65kDa


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011652891.1 low-temperature-induced 65 kDa protein isoform X2 [Cucumis sativus]2.0e-8258.13Show/hide
Query:  EDHEKKSVLKKVKAKAKKIKDTITKHGH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRST--VMHHWPPPPPTE
        E HEKKSVLKKVKAKAKKIKDTITKHGH H HH E++  DD+EDE   VVEDP++QGAPLYEGAAMRS VA       DV  G  T  +MH+ PPP   E
Subjt:  EDHEKKSVLKKVKAKAKKIKDTITKHGH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRST--VMHHWPPPPPTE

Query:  TTSR-SAVDAGFATKEKEVD--RLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQE-AGSSEILDSFAKMKVNDENRANRAGN
         TSR SAVD GF +        ++D+S VAPNTTMSLSP  LE+DPHA PK PHAP  SEVK  DP+  GS+E AG S++ DSFA+MKV D+   NR G+
Subjt:  TTSR-SAVDAGFATKEKEVD--RLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQE-AGSSEILDSFAKMKVNDENRANRAGN

Query:  -------EAGDQQSSYGQKISAVGSAVAGTAISAKDFVASKLGYGVRTGE---GEDKGVSVKEY-------LAQKLEPGEDDRALSEAISEAFQKRKEEV
               + G+ Q++Y QKISAVGSAV+G A++AKDFVASKLGYG  T E    +    S  EY       + +KL+PGE+DRALSE ISEA+ +RK+EV
Subjt:  -------EAGDQQSSYGQKISAVGSAVAGTAISAKDFVASKLGYGVRTGE---GEDKGVSVKEY-------LAQKLEPGEDDRALSEAISEAFQKRKEEV

Query:  -----------PPKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGD-SPPSQQ
                   P K EVTESEELTRRLG+ED   TE+SS A A AA  RSVV  VKDTVGSW+G  G+ S PSQQ
Subjt:  -----------PPKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGD-SPPSQQ

XP_022155698.1 low-temperature-induced 65 kDa protein-like [Momordica charantia]3.4e-17598.54Show/hide
Query:  EDHEKKSVLKKVKAKAKKIKDTITKHGHHPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWPPPPPTETTS
        EDHEKKSVLKKVKAKAKKIKDTITKHGHHPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDV FGRSTVMHHWPPPPPTETTS
Subjt:  EDHEKKSVLKKVKAKAKKIKDTITKHGHHPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWPPPPPTETTS

Query:  RSAVDAGFATKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEA--GSSEILDSFAKMKVNDENRANRAGNEAGDQ
        RSAVDAGFATKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEA  GSSEILDSFAKMKVNDENRANRAGNEAGDQ
Subjt:  RSAVDAGFATKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEA--GSSEILDSFAKMKVNDENRANRAGNEAGDQ

Query:  QSSYGQKISAVGSAVAGTAISAKDFVASKLGYGVRTGEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQKRKEEVPPKAEVTESEELTRRLGREDNR
        QSSYGQKISAVGSA+AGTAISAKDFVASKLGYGVRTGEGEDKGVSVKEYLAQKLEPGEDDRAL EAISEAFQKRKEEVPPKAEVTESEELTRRLGREDNR
Subjt:  QSSYGQKISAVGSAVAGTAISAKDFVASKLGYGVRTGEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQKRKEEVPPKAEVTESEELTRRLGREDNR

Query:  ETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGDSPPSQQQ
        ETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGDSPPSQQQ
Subjt:  ETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGDSPPSQQQ

XP_031739118.1 low-temperature-induced 65 kDa protein isoform X1 [Cucumis sativus]2.0e-8258.13Show/hide
Query:  EDHEKKSVLKKVKAKAKKIKDTITKHGH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRST--VMHHWPPPPPTE
        E HEKKSVLKKVKAKAKKIKDTITKHGH H HH E++  DD+EDE   VVEDP++QGAPLYEGAAMRS VA       DV  G  T  +MH+ PPP   E
Subjt:  EDHEKKSVLKKVKAKAKKIKDTITKHGH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRST--VMHHWPPPPPTE

Query:  TTSR-SAVDAGFATKEKEVD--RLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQE-AGSSEILDSFAKMKVNDENRANRAGN
         TSR SAVD GF +        ++D+S VAPNTTMSLSP  LE+DPHA PK PHAP  SEVK  DP+  GS+E AG S++ DSFA+MKV D+   NR G+
Subjt:  TTSR-SAVDAGFATKEKEVD--RLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQE-AGSSEILDSFAKMKVNDENRANRAGN

Query:  -------EAGDQQSSYGQKISAVGSAVAGTAISAKDFVASKLGYGVRTGE---GEDKGVSVKEY-------LAQKLEPGEDDRALSEAISEAFQKRKEEV
               + G+ Q++Y QKISAVGSAV+G A++AKDFVASKLGYG  T E    +    S  EY       + +KL+PGE+DRALSE ISEA+ +RK+EV
Subjt:  -------EAGDQQSSYGQKISAVGSAVAGTAISAKDFVASKLGYGVRTGE---GEDKGVSVKEY-------LAQKLEPGEDDRALSEAISEAFQKRKEEV

Query:  -----------PPKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGD-SPPSQQ
                   P K EVTESEELTRRLG+ED   TE+SS A A AA  RSVV  VKDTVGSW+G  G+ S PSQQ
Subjt:  -----------PPKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGD-SPPSQQ

XP_038888501.1 low-temperature-induced 65 kDa protein isoform X1 [Benincasa hispida]1.7e-8657.95Show/hide
Query:  HEKKSVLKKVKAKAKKIKDTITKHGH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWPPPPPTETTSR
        HEKKSVLKKVKAKAKKIKDTITKHGH H H + D E++DDEDED+ V+EDP++QGAPLYEGAAMRS VA       DV  G +T MH+ P   P ETTSR
Subjt:  HEKKSVLKKVKAKAKKIKDTITKHGH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWPPPPPTETTSR

Query:  -SAVDAGFA-----TKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEAGSSEILDSFAKMKVNDENRANRAG---
         SA D GF      T  K  D++++SAVAPNTTMSLSP  LEEDPH     PH P +S+VK  DPA  GS+EAG S++ DSFAKMKVNDE   NR     
Subjt:  -SAVDAGFA-----TKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEAGSSEILDSFAKMKVNDENRANRAG---

Query:  --NEAGDQQSSYGQKISAVGSAVAGTAISAKDFVASKLGYGVRTGEGEDKGVSVKEY-------LAQKLEPGEDDRALSEAISEAFQKRKEEVP------
          +  G+ Q++YGQK+SAVGSAV+  A++AKDFVASKLGY   T E  +   S  EY       + +KL+PGE+D+ALSE ISEA  +RK E+       
Subjt:  --NEAGDQQSSYGQKISAVGSAVAGTAISAKDFVASKLGYGVRTGEGEDKGVSVKEY-------LAQKLEPGEDDRALSEAISEAFQKRKEEVP------

Query:  --------PKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGD-SPPSQQ
                 K EVTESEELTRRLG+ED   TE+SS A ATAA  RSVV  VKDTVGSW+GK G+ S PSQQ
Subjt:  --------PKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGD-SPPSQQ

XP_038888502.1 low-temperature-induced 65 kDa protein isoform X2 [Benincasa hispida]3.4e-8256.87Show/hide
Query:  HEKKSVLKKVKAKAKKIKDTITKHGH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWPPPPPTETTSR
        HEKKSVLKKVKAKAKKIKDTITKHGH H H + D E++DDEDED+ V+EDP++QGAP    AAMRS VA       DV  G +T MH+ P   P ETTSR
Subjt:  HEKKSVLKKVKAKAKKIKDTITKHGH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWPPPPPTETTSR

Query:  -SAVDAGFA-----TKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEAGSSEILDSFAKMKVNDENRANRAG---
         SA D GF      T  K  D++++SAVAPNTTMSLSP  LEEDPH     PH P +S+VK  DPA  GS+EAG S++ DSFAKMKVNDE   NR     
Subjt:  -SAVDAGFA-----TKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEAGSSEILDSFAKMKVNDENRANRAG---

Query:  --NEAGDQQSSYGQKISAVGSAVAGTAISAKDFVASKLGYGVRTGEGEDKGVSVKEY-------LAQKLEPGEDDRALSEAISEAFQKRKEEVP------
          +  G+ Q++YGQK+SAVGSAV+  A++AKDFVASKLGY   T E  +   S  EY       + +KL+PGE+D+ALSE ISEA  +RK E+       
Subjt:  --NEAGDQQSSYGQKISAVGSAVAGTAISAKDFVASKLGYGVRTGEGEDKGVSVKEY-------LAQKLEPGEDDRALSEAISEAFQKRKEEVP------

Query:  --------PKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGD-SPPSQQ
                 K EVTESEELTRRLG+ED   TE+SS A ATAA  RSVV  VKDTVGSW+GK G+ S PSQQ
Subjt:  --------PKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGD-SPPSQQ

TrEMBL top hitse value%identityAlignment
A0A1S3CPX7 low-temperature-induced 65 kDa protein4.0e-8157.07Show/hide
Query:  EDHEKKSVLKKVKAKAKKIKDTITKHGH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVA-PTPTPTPDVEFGRSTVMHHWPPPPP-TE
        E HEKKSVLKKVKAKAKKIKDTITKH H H HH E++EEDD+EDE   VVEDP++QGAPLYEGAAMRS  A         +  G +T+MH++ PPP   E
Subjt:  EDHEKKSVLKKVKAKAKKIKDTITKHGH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVA-PTPTPTPDVEFGRSTVMHHWPPPPP-TE

Query:  TTSR-SAVDAGFATKEKEV--DRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQE-AGSSEILDSFAKMKVNDENRANRAGN
          SR SAVD GF + E      ++D+S VAPNTTMSLSP  LEEDPH  PK P AP  SEVK  DP+  GS+E AG S++ DSFAKMKV D+ + NR G+
Subjt:  TTSR-SAVDAGFATKEKEV--DRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQE-AGSSEILDSFAKMKVNDENRANRAGN

Query:  -------EAGDQQSSYGQKISAVGSAVAGTAISAKDFVASKLGYG-VRTGEGEDK---------GVSVKEYLAQKLEPGEDDRALSEAISEAFQKRKEEV
                 G+   +Y QKISAVGSAV+G A++AKDFVASKLGYG  + G   DK         G  +   + +KL+PGE+DRALSE ISEA  +RK+EV
Subjt:  -------EAGDQQSSYGQKISAVGSAVAGTAISAKDFVASKLGYG-VRTGEGEDK---------GVSVKEYLAQKLEPGEDDRALSEAISEAFQKRKEEV

Query:  -----------PPKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGD-SPPSQQ
                   P K  VTESEELTRRLG ED   TE+SS A+A AA  RSVV  VKDTVGSW+GK G+ S PSQQ
Subjt:  -----------PPKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGD-SPPSQQ

A0A5D3E5L4 Low-temperature-induced 65 kDa protein2.1e-5852.85Show/hide
Query:  LYEGAAMRSGVA-PTPTPTPDVEFGRSTVMHHWPPPPP-TETTSR-SAVDAGFATKEKEV--DRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHS
        +YEGAAMRS  A         +  G +T+MH++ PPP   E  SR SAVD GF + E      ++D+S VAPNTTMSLSP  LEEDPH  PK P AP  S
Subjt:  LYEGAAMRSGVA-PTPTPTPDVEFGRSTVMHHWPPPPP-TETTSR-SAVDAGFATKEKEV--DRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHS

Query:  EVKASDPAAIGSQE-AGSSEILDSFAKMKVNDENRANRAGN-------EAGDQQSSYGQKISAVGSAVAGTAISAKDFVASKLGYG-VRTGEGEDK----
        EVK  DP+  GS+E AG S++ DSFAKMKV D+ + NR G+         G+   +Y QKISAVGSAV+G A++AKDFVASKLGYG  + G   DK    
Subjt:  EVKASDPAAIGSQE-AGSSEILDSFAKMKVNDENRANRAGN-------EAGDQQSSYGQKISAVGSAVAGTAISAKDFVASKLGYG-VRTGEGEDK----

Query:  -----GVSVKEYLAQKLEPGEDDRALSEAISEAFQKRKEEV-----------PPKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTV
             G  +   + +KL+PGE+DRALSE ISEA  +RK+EV           P K  VTESEELTRRLG ED   TE+SS A+A AA  RSVV  VKDTV
Subjt:  -----GVSVKEYLAQKLEPGEDDRALSEAISEAFQKRKEEV-----------PPKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTV

Query:  GSWMGKGGD-SPPSQQ
        GSW+GK G+ S PSQQ
Subjt:  GSWMGKGGD-SPPSQQ

A0A6J1DNM6 low-temperature-induced 65 kDa protein-like1.6e-17598.54Show/hide
Query:  EDHEKKSVLKKVKAKAKKIKDTITKHGHHPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWPPPPPTETTS
        EDHEKKSVLKKVKAKAKKIKDTITKHGHHPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDV FGRSTVMHHWPPPPPTETTS
Subjt:  EDHEKKSVLKKVKAKAKKIKDTITKHGHHPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWPPPPPTETTS

Query:  RSAVDAGFATKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEA--GSSEILDSFAKMKVNDENRANRAGNEAGDQ
        RSAVDAGFATKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEA  GSSEILDSFAKMKVNDENRANRAGNEAGDQ
Subjt:  RSAVDAGFATKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEA--GSSEILDSFAKMKVNDENRANRAGNEAGDQ

Query:  QSSYGQKISAVGSAVAGTAISAKDFVASKLGYGVRTGEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQKRKEEVPPKAEVTESEELTRRLGREDNR
        QSSYGQKISAVGSA+AGTAISAKDFVASKLGYGVRTGEGEDKGVSVKEYLAQKLEPGEDDRAL EAISEAFQKRKEEVPPKAEVTESEELTRRLGREDNR
Subjt:  QSSYGQKISAVGSAVAGTAISAKDFVASKLGYGVRTGEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQKRKEEVPPKAEVTESEELTRRLGREDNR

Query:  ETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGDSPPSQQQ
        ETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGDSPPSQQQ
Subjt:  ETERSSTAAATAAAARSVVDTVKDTVGSWMGKGGDSPPSQQQ

A0A6J1H2H6 LOW QUALITY PROTEIN: low-temperature-induced 65 kDa protein-like8.1e-5850.14Show/hide
Query:  EDHEKKSVLKKVKAKAKKIKD--------TITKHGH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWP
        + HEKKSVLKKVKAKAKKIKD        TITKHGH H HH     ED +++E    V DP+LQGAPLYEGA MRS +A       DV  G  T +H  P
Subjt:  EDHEKKSVLKKVKAKAKKIKD--------TITKHGH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWP

Query:  PPPPTETTSRSAVDAGFATKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQ---PHAPLHSEVKASDPAAIGSQEAGSSEILDSFAKMKVNDENRA
        PP P ET SR                   SAV PNTTMSLSP  LEE P AP  +   PH P +SEVKA DPA  G++E G S+  DSFA+MK+N E+  
Subjt:  PPPPTETTSRSAVDAGFATKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQ---PHAPLHSEVKASDPAAIGSQEAGSSEILDSFAKMKVNDENRA

Query:  NRAGNEAG-DQ--QSSYGQKISAVGSAVAGTAISAKDF-VASKLGYGVRTGEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQKRKEEV------PP
         R G  +G DQ  QSS G+KIS VGS + G A    D   +S L YG +          +   + +KL+PGE+D+ALSE ISEA+   KE+V       P
Subjt:  NRAGNEAG-DQ--QSSYGQKISAVGSAVAGTAISAKDF-VASKLGYGVRTGEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQKRKEEV------PP

Query:  KAEVTESEELTRRLGREDNRE-TERSSTA-AATAAAARSVVDTVKDTVGSWMGKGGD
        K +VTESEELT+RLG EDN E T+R S A + TAA  +++ D V+D+VGSWMGKGGD
Subjt:  KAEVTESEELTRRLGREDNRE-TERSSTA-AATAAAARSVVDTVKDTVGSWMGKGGD

A0A6J1K662 low-temperature-induced 65 kDa protein1.0e-6051.58Show/hide
Query:  EDHEKKSVLKKVKAKAKKIKDTITKHGH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWPPPPPTETT
        + HEKKSVLKKVKAKAKKIKDTITKHGH H HH     ED +E+E    V DP+LQGAPLYEGAAMRS VA       DV  G  T +H  PPP P  T 
Subjt:  EDHEKKSVLKKVKAKAKKIKDTITKHGH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWPPPPPTETT

Query:  SRSAVDAGFATKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQ---PHAPLHSEVKASDPAAIGSQEAGSSEILDSFAKMKVNDENRANRAGNEAG
        SR                   SAV PNTTMSLSP  LEE P AP  +   PH P +SEVKA DPA  G+++ G S+  DSFA+MK+N+E+   R G  +G
Subjt:  SRSAVDAGFATKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQ---PHAPLHSEVKASDPAAIGSQEAGSSEILDSFAKMKVNDENRANRAGNEAG

Query:  -DQ--QSSYGQKISAVGSAVAGTAISAKDF-VASKLGYGVRTGEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQKRKEEV------PPKAEVTESE
         DQ  QSS G+KIS  GS + G A    D   +S L YG +          +   + +KL+PGE+D+ALSE ISEA+   KE+V       PK +VTESE
Subjt:  -DQ--QSSYGQKISAVGSAVAGTAISAKDF-VASKLGYGVRTGEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQKRKEEV------PPKAEVTESE

Query:  ELTRRLGREDNRE-TERSSTA-AATAAAARSVVDTVKDTVGSWMGKGGD
        ELT+RLGREDN E T+R S A + TAA  +++ D V+D+VGSWMGKGGD
Subjt:  ELTRRLGREDNRE-TERSSTA-AATAAAARSVVDTVKDTVGSWMGKGGD

SwissProt top hitse value%identityAlignment
Q04980 Low-temperature-induced 65 kDa protein1.3e-0752Show/hide
Query:  EDHEK--KSVLKKVKAKAKKIKDTITKHGHHPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTP
        E HEK    VLKKVK KAKKIK+++TKHG+   H   + EDDD++ DE   +DP++ GAP+YE +A+R GV   P
Subjt:  EDHEK--KSVLKKVKAKAKKIKDTITKHGHHPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTP

Arabidopsis top hitse value%identityAlignment
AT4G25580.1 CAP160 protein1.1e-0930.69Show/hide
Query:  ENRANRAGNEAGD-QQSSYGQKISAVGSAVAGTAISAKDFVASKLGY---------------------------------------------------GV
        ++R  R G E     QSSY  KIS   S VA  A++AK+ VASKLGY                                                   G 
Subjt:  ENRANRAGNEAGD-QQSSYGQKISAVGSAVAGTAISAKDFVASKLGY---------------------------------------------------GV

Query:  RTGEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQ---KRKEEVPPK-AEVTESEELTRRLG--REDNRETERSSTAAATAAAARSVVDTVKDTVGS
         T +G+D+GVS KE+L +KL PGE+D+ALSE ++E         E  PPK   VT+SEE+ +RLG  ++ + E       A        + + ++  V S
Subjt:  RTGEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQ---KRKEEVPPK-AEVTESEELTRRLG--REDNRETERSSTAAATAAAARSVVDTVKDTVGS

Query:  WM
        W+
Subjt:  WM

AT4G25580.1 CAP160 protein5.9e+0028.42Show/hide
Query:  HEK--KSVLKKVKAKAKKIKDTITKHGH-HPHHYEDNEEDD---DEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWPPPPPT
        HEK    VLKKVK KAKKIK+ +TKHGH H H   ++  DD   D+++DE    D QL G     G A    V     P     F   +  H  P  P  
Subjt:  HEK--KSVLKKVKAKAKKIKDTITKHGH-HPHHYEDNEEDD---DEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWPPPPPT

Query:  ----ETTSRSAVDAGFATKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEA--GSSEILDSFAKMKVNDENRANR
            E  SR    +G    EKE  R   +    NT +SL   + +      P +  +   S+V    P  +    A  GS   L ++ + KV D      
Subjt:  ----ETTSRSAVDAGFATKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEA--GSSEILDSFAKMKVNDENRANR

Query:  AGNEAGDQQSSYGQKISAVGSAVAGTAISAKDF-----------------VASKLGYGVRTGEGEDKGVSVKEYLAQKLEPGEDD
         G   G+  ++    +SA+G    GT +  K                     SK+      G GE   V+      ++ E GEDD
Subjt:  AGNEAGDQQSSYGQKISAVGSAVAGTAISAKDF-----------------VASKLGYGVRTGEGEDKGVSVKEYLAQKLEPGEDD

AT5G52300.1 CAP160 protein9.0e-0952Show/hide
Query:  EDHEK--KSVLKKVKAKAKKIKDTITKHGHHPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTP
        E HEK    VLKKVK KAKKIK+++TKHG+   H   + EDDD++ DE   +DP++ GAP+YE +A+R GV   P
Subjt:  EDHEK--KSVLKKVKAKAKKIKDTITKHGHHPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTP

AT5G52300.1 CAP160 protein1.3e-0422.19Show/hide
Query:  SRSAVDAGFATKEKEVDRLDNSAVAPNTTMSL---SPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEAGSSEILDSFAKMKVNDENRANRAGNEAG
        SR   +  F T+  E D    S +  N+       S   +EED          P   +VK               +     ++ K  D++   +  +   
Subjt:  SRSAVDAGFATKEKEVDRLDNSAVAPNTTMSL---SPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEAGSSEILDSFAKMKVNDENRANRAGNEAG

Query:  DQQSSYGQKISAVGSAVAGTAISAKDFVASKLGY-------------------------------------------------------------GVR-T
         + S+Y +++++  SA+   AI+AK+ VASKLGY                                                             GV+ T
Subjt:  DQQSSYGQKISAVGSAVAGTAISAKDFVASKLGY-------------------------------------------------------------GVR-T

Query:  GEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQ-----KRKEEVPPKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMG
         +GE+KGV+ K Y+++KL+PGE+D+ALSE I+E        ++K     + EVT  +  + ++              A        +V  VK  V SW+G
Subjt:  GEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQ-----KRKEEVPPKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMG

Query:  KGGDSPPSQQQ
            SP S ++
Subjt:  KGGDSPPSQQQ

AT5G52300.2 CAP160 protein9.0e-0952Show/hide
Query:  EDHEK--KSVLKKVKAKAKKIKDTITKHGHHPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTP
        E HEK    VLKKVK KAKKIK+++TKHG+   H   + EDDD++ DE   +DP++ GAP+YE +A+R GV   P
Subjt:  EDHEK--KSVLKKVKAKAKKIKDTITKHGHHPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTP

AT5G52300.2 CAP160 protein1.3e-0422.19Show/hide
Query:  SRSAVDAGFATKEKEVDRLDNSAVAPNTTMSL---SPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEAGSSEILDSFAKMKVNDENRANRAGNEAG
        SR   +  F T+  E D    S +  N+       S   +EED          P   +VK               +     ++ K  D++   +  +   
Subjt:  SRSAVDAGFATKEKEVDRLDNSAVAPNTTMSL---SPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEAGSSEILDSFAKMKVNDENRANRAGNEAG

Query:  DQQSSYGQKISAVGSAVAGTAISAKDFVASKLGY-------------------------------------------------------------GVR-T
         + S+Y +++++  SA+   AI+AK+ VASKLGY                                                             GV+ T
Subjt:  DQQSSYGQKISAVGSAVAGTAISAKDFVASKLGY-------------------------------------------------------------GVR-T

Query:  GEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQ-----KRKEEVPPKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMG
         +GE+KGV+ K Y+++KL+PGE+D+ALSE I+E        ++K     + EVT  +  + ++              A        +V  VK  V SW+G
Subjt:  GEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQ-----KRKEEVPPKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMG

Query:  KGGDSPPSQQQ
            SP S ++
Subjt:  KGGDSPPSQQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGATCATGAGAAGAAATCTGTGTTGAAGAAAGTGAAGGCAAAGGCTAAGAAGATTAAGGACACCATCACTAAGCACGGCCATCATCCTCACCACTACGAGGATAATGA
AGAAGACGACGATGAAGATGAAGATGAAGCAGTGGTGGAAGATCCTCAACTCCAGGGAGCACCATTGTATGAAGGTGCTGCAATGAGGAGTGGTGTGGCTCCAACTCCAA
CTCCAACTCCAGATGTTGAATTTGGCAGGTCGACAGTGATGCATCATTGGCCTCCTCCACCCCCAACAGAAACGACAAGTCGCTCTGCTGTCGACGCTGGTTTTGCAACC
AAGGAAAAGGAAGTAGATCGTCTAGATAACTCCGCCGTCGCCCCCAACACGACCATGTCTCTGTCCCCTTTGAGCTTGGAGGAGGATCCTCACGCGCCGCCTAAACAGCC
TCACGCGCCTCTACATTCTGAGGTCAAAGCTTCTGATCCCGCGGCGATTGGGAGCCAAGAAGCCGGGTCTTCTGAGATTCTGGATTCATTTGCAAAGATGAAAGTCAATG
ACGAAAACAGAGCGAACCGGGCCGGAAACGAGGCAGGAGATCAGCAGAGCAGTTACGGGCAGAAGATCTCAGCCGTGGGTTCTGCGGTGGCCGGAACCGCCATCTCGGCG
AAGGATTTTGTGGCGTCGAAGCTGGGCTACGGCGTAAGAACAGGGGAAGGGGAAGATAAAGGGGTGTCGGTGAAGGAGTATCTAGCGCAGAAGCTGGAGCCGGGGGAGGA
CGACAGGGCGTTGTCGGAGGCCATATCAGAGGCCTTCCAAAAGCGGAAGGAGGAGGTGCCACCGAAGGCGGAGGTGACGGAGTCGGAGGAGCTCACGCGGCGCCTCGGCA
GAGAGGACAATCGAGAGACAGAGAGATCTTCCACCGCCGCTGCCACAGCCGCGGCGGCGAGGAGCGTGGTGGATACCGTGAAAGATACGGTCGGGTCGTGGATGGGGAAA
GGTGGAGACTCCCCGCCGTCTCAGCAGCAG
mRNA sequenceShow/hide mRNA sequence
GAAGATCATGAGAAGAAATCTGTGTTGAAGAAAGTGAAGGCAAAGGCTAAGAAGATTAAGGACACCATCACTAAGCACGGCCATCATCCTCACCACTACGAGGATAATGA
AGAAGACGACGATGAAGATGAAGATGAAGCAGTGGTGGAAGATCCTCAACTCCAGGGAGCACCATTGTATGAAGGTGCTGCAATGAGGAGTGGTGTGGCTCCAACTCCAA
CTCCAACTCCAGATGTTGAATTTGGCAGGTCGACAGTGATGCATCATTGGCCTCCTCCACCCCCAACAGAAACGACAAGTCGCTCTGCTGTCGACGCTGGTTTTGCAACC
AAGGAAAAGGAAGTAGATCGTCTAGATAACTCCGCCGTCGCCCCCAACACGACCATGTCTCTGTCCCCTTTGAGCTTGGAGGAGGATCCTCACGCGCCGCCTAAACAGCC
TCACGCGCCTCTACATTCTGAGGTCAAAGCTTCTGATCCCGCGGCGATTGGGAGCCAAGAAGCCGGGTCTTCTGAGATTCTGGATTCATTTGCAAAGATGAAAGTCAATG
ACGAAAACAGAGCGAACCGGGCCGGAAACGAGGCAGGAGATCAGCAGAGCAGTTACGGGCAGAAGATCTCAGCCGTGGGTTCTGCGGTGGCCGGAACCGCCATCTCGGCG
AAGGATTTTGTGGCGTCGAAGCTGGGCTACGGCGTAAGAACAGGGGAAGGGGAAGATAAAGGGGTGTCGGTGAAGGAGTATCTAGCGCAGAAGCTGGAGCCGGGGGAGGA
CGACAGGGCGTTGTCGGAGGCCATATCAGAGGCCTTCCAAAAGCGGAAGGAGGAGGTGCCACCGAAGGCGGAGGTGACGGAGTCGGAGGAGCTCACGCGGCGCCTCGGCA
GAGAGGACAATCGAGAGACAGAGAGATCTTCCACCGCCGCTGCCACAGCCGCGGCGGCGAGGAGCGTGGTGGATACCGTGAAAGATACGGTCGGGTCGTGGATGGGGAAA
GGTGGAGACTCCCCGCCGTCTCAGCAGCAG
Protein sequenceShow/hide protein sequence
EDHEKKSVLKKVKAKAKKIKDTITKHGHHPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVEFGRSTVMHHWPPPPPTETTSRSAVDAGFAT
KEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPKQPHAPLHSEVKASDPAAIGSQEAGSSEILDSFAKMKVNDENRANRAGNEAGDQQSSYGQKISAVGSAVAGTAISA
KDFVASKLGYGVRTGEGEDKGVSVKEYLAQKLEPGEDDRALSEAISEAFQKRKEEVPPKAEVTESEELTRRLGREDNRETERSSTAAATAAAARSVVDTVKDTVGSWMGK
GGDSPPSQQQ