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MS017795 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017795
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold373:2583952..2584330
RNA-Seq ExpressionMS017795
SyntenyMS017795
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8656311.1 putative naringenin-chalcone synthase [Hibiscus syriacus]1.2e-0835.24Show/hide
Query:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKKKNLSLQYWNATSDC-WDLNLKRNIPDLETEEGASLISLLTNVNFKEC-DDRKMWSLEKDRIFSV
        ++G G  V F  D WL  FPLK  FPR+  ++ +K   ++    N++S C WD+ L+RN+ D E E+   L+SLL++ +     DD  +W+  ++  FS 
Subjt:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKKKNLSLQYWNATSDC-WDLNLKRNIPDLETEEGASLISLLTNVNFKEC-DDRKMWSLEKDRIFSV

Query:  RSMTK
        +S  K
Subjt:  RSMTK

KAE8664767.1 hypothetical protein F3Y22_tig00112738pilonHSYRG00325 [Hibiscus syriacus]1.6e-0831.71Show/hide
Query:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRM-ANSKKKNLSLQYWNATSDCWDLNLKRNIPDLETEEGASLISLLTN-VNFKECDDRKMWSLEKDRIFSV
        +VG G  + F  D W+   PLK SFPRL  + +N   K +    +++    W++ L+R++ D E E+ A+L+S+++N   FKE  D  +W      ++SV
Subjt:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRM-ANSKKKNLSLQYWNATSDCWDLNLKRNIPDLETEEGASLISLLTN-VNFKECDDRKMWSLEKDRIFSV

Query:  RSMTKRSCGNCEGICRLFANIIW
         S  K +C   +     + NI+W
Subjt:  RSMTKRSCGNCEGICRLFANIIW

KAE8734648.1 hypothetical protein F3Y22_tig00000738pilonHSYRG00149 [Hibiscus syriacus]5.3e-0936.27Show/hide
Query:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKK-KNLSLQYWNATSDCWDLNLKRNIPDLETEEGASLISLLTNVNFKEC-DDRKMWSLEKDRIFSV
        K G+G  V F +D WL   PLK  FPRL+ ++++K  K +  +  N     WD+ ++RN+ D E E+   LIS+L N++   C +D  +WS   +  FS 
Subjt:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKK-KNLSLQYWNATSDCWDLNLKRNIPDLETEEGASLISLLTNVNFKEC-DDRKMWSLEKDRIFSV

Query:  RS
        +S
Subjt:  RS

XP_009335445.1 PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri]2.7e-0833.85Show/hide
Query:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKKKNL-SLQYWNATSDCWDLNLKRNIPDLETEEGASLISLLTNVNFKE--CDDRKMWSLEKDRIFS
        +VG G  V F +D WL   PLK  +PRL  ++    +N+ S    +  S  W+ + +RN+  +ETEE A L+  + NV   +   DDR+ W LE   +F+
Subjt:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKKKNL-SLQYWNATSDCWDLNLKRNIPDLETEEGASLISLLTNVNFKE--CDDRKMWSLEKDRIFS

Query:  VRSMTKRSCGNCEGICRLF--ANIIWHAKI
         +S   RS  +  GI + F  ++ IW +K+
Subjt:  VRSMTKRSCGNCEGICRLF--ANIIWHAKI

XP_026453629.1 uncharacterized protein LOC113354505 [Papaver somniferum]3.5e-0834.65Show/hide
Query:  VGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKKKNLSLQYWNATS--DCWDLNLKRNIPDLETEEGASLISLLTNVNFKECDDRKMWSLEKDRIFSVR
        +G+G    F +D WL   PLK +FP L+ ++  K   +S  Y+        W+L+L+R + D+E  E  +L   L NV   E +DR+ W    D  F+VR
Subjt:  VGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKKKNLSLQYWNATS--DCWDLNLKRNIPDLETEEGASLISLLTNVNFKECDDRKMWSLEKDRIFSVR

Query:  S
        S
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A6A2WFH9 O-fucosyltransferase family protein5.8e-0935.24Show/hide
Query:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKKKNLSLQYWNATSDC-WDLNLKRNIPDLETEEGASLISLLTNVNFKEC-DDRKMWSLEKDRIFSV
        ++G G  V F  D WL  FPLK  FPR+  ++ +K   ++    N++S C WD+ L+RN+ D E E+   L+SLL++ +     DD  +W+  ++  FS 
Subjt:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKKKNLSLQYWNATSDC-WDLNLKRNIPDLETEEGASLISLLTNVNFKEC-DDRKMWSLEKDRIFSV

Query:  RSMTK
        +S  K
Subjt:  RSMTK

A0A6A2Z5Y2 Nucleobase-ascorbate transporter 82.9e-0836.19Show/hide
Query:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMA-NSKKKNLSLQYWNATSDCWDLNLKRNIPDLETEEGASLISLLTNVN-FKECDDRKMWSLEKDRIFSV
        K G+G +V F +D WL   PLK+ FPRL+ ++ N   K    +  NA+   WD+ ++RN+ D E E+   LIS+L N + F   DD  +W    +  F+ 
Subjt:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMA-NSKKKNLSLQYWNATSDCWDLNLKRNIPDLETEEGASLISLLTNVN-FKECDDRKMWSLEKDRIFSV

Query:  RSMTK
        +S  K
Subjt:  RSMTK

A0A6A2ZG37 Uncharacterized protein2.2e-0835.58Show/hide
Query:  VGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKKKNLSLQYWNATSDC-WDLNLKRNIPDLETEEGASLISLLTNVNFKEC-DDRKMWSLEKDRIFSVR
        +G G  V F  D WL  FPLK  FPR+  ++ +K   ++    N++S C WD+ L+RN+ D E E+   L+SLL + +     DD  +W+   +  FS +
Subjt:  VGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKKKNLSLQYWNATSDC-WDLNLKRNIPDLETEEGASLISLLTNVNFKEC-DDRKMWSLEKDRIFSVR

Query:  SMTK
        S  K
Subjt:  SMTK

A0A6A3D475 RNase H domain-containing protein2.6e-0936.27Show/hide
Query:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKK-KNLSLQYWNATSDCWDLNLKRNIPDLETEEGASLISLLTNVNFKEC-DDRKMWSLEKDRIFSV
        K G+G  V F +D WL   PLK  FPRL+ ++++K  K +  +  N     WD+ ++RN+ D E E+   LIS+L N++   C +D  +WS   +  FS 
Subjt:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKK-KNLSLQYWNATSDCWDLNLKRNIPDLETEEGASLISLLTNVNFKEC-DDRKMWSLEKDRIFSV

Query:  RS
        +S
Subjt:  RS

A0A7J6VUR7 Uncharacterized protein6.4e-0836.27Show/hide
Query:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKKKNLSLQYWNATSDCWDLNL-KRNIPDLETEEGASLISLLTNVNFKECDDRKMWSLEKDRIFSVR
        KV  G N  F  D W    PL   F RL+R+++ K   ++  +   T   WDL L +R +   E EE A+++++LT V+F    DR +W   K++IF+VR
Subjt:  KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKKKNLSLQYWNATSDCWDLNL-KRNIPDLETEEGASLISLLTNVNFKECDDRKMWSLEKDRIFSVR

Query:  SM
        +M
Subjt:  SM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGTTGGCAGAGGATACAATGTTACATTTTGCGATGATCATTGGCTTTTTTACTTCCCTCTAAAAACATCTTTCCCAAGACTTCATAGGATGGCAAACTCAAAAAAAAA
AAATCTTAGTCTACAATACTGGAACGCCACGTCCGATTGTTGGGACCTAAACTTGAAGAGAAACATCCCCGATTTGGAAACTGAAGAGGGGGCATCTCTGATCAGCTTGC
TCACAAATGTCAATTTTAAAGAGTGTGATGATAGAAAAATGTGGTCTCTTGAGAAAGATAGAATCTTCTCGGTTAGATCTATGACCAAAAGGTCTTGTGGCAATTGTGAA
GGCATTTGCAGGCTCTTTGCCAATATTATTTGGCATGCTAAAATTCTT
mRNA sequenceShow/hide mRNA sequence
AAGGTTGGCAGAGGATACAATGTTACATTTTGCGATGATCATTGGCTTTTTTACTTCCCTCTAAAAACATCTTTCCCAAGACTTCATAGGATGGCAAACTCAAAAAAAAA
AAATCTTAGTCTACAATACTGGAACGCCACGTCCGATTGTTGGGACCTAAACTTGAAGAGAAACATCCCCGATTTGGAAACTGAAGAGGGGGCATCTCTGATCAGCTTGC
TCACAAATGTCAATTTTAAAGAGTGTGATGATAGAAAAATGTGGTCTCTTGAGAAAGATAGAATCTTCTCGGTTAGATCTATGACCAAAAGGTCTTGTGGCAATTGTGAA
GGCATTTGCAGGCTCTTTGCCAATATTATTTGGCATGCTAAAATTCTT
Protein sequenceShow/hide protein sequence
KVGRGYNVTFCDDHWLFYFPLKTSFPRLHRMANSKKKNLSLQYWNATSDCWDLNLKRNIPDLETEEGASLISLLTNVNFKECDDRKMWSLEKDRIFSVRSMTKRSCGNCE
GICRLFANIIWHAKIL