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MS017796 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017796
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger protein ZAT1-like
Genome locationscaffold373:2612943..2613251
RNA-Seq ExpressionMS017796
SyntenyMS017796
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044303 - Zinc finger protein ZAT1/4/9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF51574.1 zinc finger protein, putative [Ricinus communis]9.4e-2049.21Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRKIRTE-----------------DC---VHQKVFQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGKNS---IDLN
        +KCKTC K FRSYQALGGHKASH+KI+T                  +C   V  K+F+CPFC K+F+SGQALGGHKKVHF      K   K+S   +DLN
Subjt:  FKCKTCNKSFRSYQALGGHKASHRKIRTE-----------------DC---VHQKVFQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGKNS---IDLN

Query:  RPPPAYDYDEDDEDEVSEIEFSAISN
         P P      +D+ EVS+ E S I N
Subjt:  RPPPAYDYDEDDEDEVSEIEFSAISN

KAB1210878.1 Zinc finger protein ZAT9 [Morella rubra]1.4e-2352Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRKIRT---ED----------------CVHQKVFQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGK---NSIDLNR
        F+C+TC K FRSYQALGGH+ASH+K R    ED                 V Q+VF+CPFCP+VFESGQALGGHKKVHF+     +  G+   N IDLN 
Subjt:  FKCKTCNKSFRSYQALGGHKASHRKIRT---ED----------------CVHQKVFQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGK---NSIDLNR

Query:  PPPAYDYDEDDEDEVSEIEFSAISN
        P P       DEDEVS++E S +SN
Subjt:  PPPAYDYDEDDEDEVSEIEFSAISN

KAE8022344.1 hypothetical protein FH972_008149 [Carpinus fangiana]1.4e-2048.76Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRKIR-------TED------CVHQKVFQCPFCPKVFESGQALGGHKKVHF-----FKKIYPKKFGKNSIDLNRPPPA
        F+C+TC K FRSYQALGGH+ASH+K +        ED          +VF+CP+C +VFESGQALGGHKKVHF       +  PK    N IDLN P P 
Subjt:  FKCKTCNKSFRSYQALGGHKASHRKIR-------TED------CVHQKVFQCPFCPKVFESGQALGGHKKVHF-----FKKIYPKKFGKNSIDLNRPPPA

Query:  YDYDEDDEDEVSEIEFSAISN
             ++E+EVS++ FS +SN
Subjt:  YDYDEDDEDEVSEIEFSAISN

KAF5935731.1 hypothetical protein HYC85_026860 [Camellia sinensis]9.4e-2049.09Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRKIRTEDCV------HQKVFQCPFCPKVFESGQALGGHKKVHFFKKI-YPKKFGKNSIDLNRPPPAYDYDEDDEDEV
        ++C+TC K F S+QALGGH+ SH K+  + C+      +QKV +CP C KVF SGQALGGHK+ H         KFG++ IDLN P P  D  +DD+DE 
Subjt:  FKCKTCNKSFRSYQALGGHKASHRKIRTEDCV------HQKVFQCPFCPKVFESGQALGGHKKVHFFKKI-YPKKFGKNSIDLNRPPPAYDYDEDDEDEV

Query:  SEIEFSAISN
        S++E SA+S+
Subjt:  SEIEFSAISN

XP_022158577.1 zinc finger protein ZAT1-like [Momordica charantia]7.9e-5196.12Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRKIRTEDCVHQKVFQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGKNSIDLNRPPPAYDYDEDDEDEVSEIEFSA
        FKCKTC+KSFRSYQALGGHKASH KIRTEDCVHQKVFQC FCPKVFESGQALGGHKKVHFFKKI PKKFGKNSIDLNRPPPAYDYDEDDEDEVSEIEFSA
Subjt:  FKCKTCNKSFRSYQALGGHKASHRKIRTEDCVHQKVFQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGKNSIDLNRPPPAYDYDEDDEDEVSEIEFSA

Query:  ISN
        ISN
Subjt:  ISN

TrEMBL top hitse value%identityAlignment
A0A5N6R157 Uncharacterized protein7.0e-2148.76Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRKIR-------TED------CVHQKVFQCPFCPKVFESGQALGGHKKVHF-----FKKIYPKKFGKNSIDLNRPPPA
        F+C+TC K FRSYQALGGH+ASH+K +        ED          +VF+CP+C +VFESGQALGGHKKVHF       +  PK    N IDLN P P 
Subjt:  FKCKTCNKSFRSYQALGGHKASHRKIR-------TED------CVHQKVFQCPFCPKVFESGQALGGHKKVHF-----FKKIYPKKFGKNSIDLNRPPPA

Query:  YDYDEDDEDEVSEIEFSAISN
             ++E+EVS++ FS +SN
Subjt:  YDYDEDDEDEVSEIEFSAISN

A0A6A1VGE4 Zinc finger protein ZAT96.8e-2452Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRKIRT---ED----------------CVHQKVFQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGK---NSIDLNR
        F+C+TC K FRSYQALGGH+ASH+K R    ED                 V Q+VF+CPFCP+VFESGQALGGHKKVHF+     +  G+   N IDLN 
Subjt:  FKCKTCNKSFRSYQALGGHKASHRKIRT---ED----------------CVHQKVFQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGK---NSIDLNR

Query:  PPPAYDYDEDDEDEVSEIEFSAISN
        P P       DEDEVS++E S +SN
Subjt:  PPPAYDYDEDDEDEVSEIEFSAISN

A0A6J1DXK2 zinc finger protein ZAT1-like3.8e-5196.12Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRKIRTEDCVHQKVFQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGKNSIDLNRPPPAYDYDEDDEDEVSEIEFSA
        FKCKTC+KSFRSYQALGGHKASH KIRTEDCVHQKVFQC FCPKVFESGQALGGHKKVHFFKKI PKKFGKNSIDLNRPPPAYDYDEDDEDEVSEIEFSA
Subjt:  FKCKTCNKSFRSYQALGGHKASHRKIRTEDCVHQKVFQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGKNSIDLNRPPPAYDYDEDDEDEVSEIEFSA

Query:  ISN
        ISN
Subjt:  ISN

A0A7J7G712 Uncharacterized protein4.5e-2049.09Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRKIRTEDCV------HQKVFQCPFCPKVFESGQALGGHKKVHFFKKI-YPKKFGKNSIDLNRPPPAYDYDEDDEDEV
        ++C+TC K F S+QALGGH+ SH K+  + C+      +QKV +CP C KVF SGQALGGHK+ H         KFG++ IDLN P P  D  +DD+DE 
Subjt:  FKCKTCNKSFRSYQALGGHKASHRKIRTEDCV------HQKVFQCPFCPKVFESGQALGGHKKVHFFKKI-YPKKFGKNSIDLNRPPPAYDYDEDDEDEV

Query:  SEIEFSAISN
        S++E SA+S+
Subjt:  SEIEFSAISN

B9R9U7 Zinc finger protein, putative4.5e-2049.21Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRKIRTE-----------------DC---VHQKVFQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGKNS---IDLN
        +KCKTC K FRSYQALGGHKASH+KI+T                  +C   V  K+F+CPFC K+F+SGQALGGHKKVHF      K   K+S   +DLN
Subjt:  FKCKTCNKSFRSYQALGGHKASHRKIRTE-----------------DC---VHQKVFQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGKNS---IDLN

Query:  RPPPAYDYDEDDEDEVSEIEFSAISN
         P P      +D+ EVS+ E S I N
Subjt:  RPPPAYDYDEDDEDEVSEIEFSAISN

SwissProt top hitse value%identityAlignment
Q39092 Zinc finger protein ZAT16.8e-1339.32Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRK-------IRTEDCVHQKV------FQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGKNS------IDLNRPPP
        F+C+TC K F+SYQALGGH+ASH+K       + +++   +K        +CP C KVF SGQALGGHK+ H        +F + S      IDLN P P
Subjt:  FKCKTCNKSFRSYQALGGHKASHRK-------IRTEDCVHQKV------FQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGKNS------IDLNRPPP

Query:  AYDYDEDDEDEVSEIEF
        +      +E+E++   F
Subjt:  AYDYDEDDEDEVSEIEF

Q9LFG0 Zinc finger protein ZAT186.3e-1146.27Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRK----IRTEDCVHQK----VFQCPFCPKVFESGQALGGHKKVH
        F+CKTCN+ F S+QALGGH+ASH+K    +  E   H+     + +C  C ++F +GQALGGH + H
Subjt:  FKCKTCNKSFRSYQALGGHKASHRK----IRTEDCVHQK----VFQCPFCPKVFESGQALGGHKKVH

Q9M202 Zinc finger protein ZAT99.5e-1539.17Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRKIRTED---------------CVHQKVFQCPFCPKVFESGQALGGHKKVHFF--------KKIYPKKFGK-NSIDL
        +KC+TC K F+SYQALGGH+ASH+K R  +                V +++ +CP C +VF SGQALGGHK+ H          ++++  +  K   IDL
Subjt:  FKCKTCNKSFRSYQALGGHKASHRKIRTED---------------CVHQKVFQCPFCPKVFESGQALGGHKKVHFF--------KKIYPKKFGK-NSIDL

Query:  NRPPPAYDYDEDDEDEVSEI
        N P P       +EDEVS +
Subjt:  NRPPPAYDYDEDDEDEVSEI

Q9SHD0 Zinc finger protein ZAT46.1e-1452.78Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRK----------IRTEDCV---HQKVFQCPFCPKVFESGQALGGHKKVH
        FKC+TC K F+SYQALGGH+ASH+K          + TE  +    +KV +CP C +VF SGQALGGHK+ H
Subjt:  FKCKTCNKSFRSYQALGGHKASHRK----------IRTEDCV---HQKVFQCPFCPKVFESGQALGGHKKVH

Q9SSW0 Zinc finger protein AZF38.3e-1147.76Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRKI-------RTEDCVHQKVFQCPFCPKVFESGQALGGHKKVHF
        +KC  C K+F SYQALGGHKASHR +       ++      K   C  C K F +GQALGGHK+ H+
Subjt:  FKCKTCNKSFRSYQALGGHKASHRKI-------RTEDCVHQKVFQCPFCPKVFESGQALGGHKKVHF

Arabidopsis top hitse value%identityAlignment
AT1G02030.1 C2H2-like zinc finger protein4.8e-1439.32Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRK-------IRTEDCVHQKV------FQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGKNS------IDLNRPPP
        F+C+TC K F+SYQALGGH+ASH+K       + +++   +K        +CP C KVF SGQALGGHK+ H        +F + S      IDLN P P
Subjt:  FKCKTCNKSFRSYQALGGHKASHRK-------IRTEDCVHQKV------FQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGKNS------IDLNRPPP

Query:  AYDYDEDDEDEVSEIEF
        +      +E+E++   F
Subjt:  AYDYDEDDEDEVSEIEF

AT2G45120.1 C2H2-like zinc finger protein4.4e-1552.78Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRK----------IRTEDCV---HQKVFQCPFCPKVFESGQALGGHKKVH
        FKC+TC K F+SYQALGGH+ASH+K          + TE  +    +KV +CP C +VF SGQALGGHK+ H
Subjt:  FKCKTCNKSFRSYQALGGHKASHRK----------IRTEDCV---HQKVFQCPFCPKVFESGQALGGHKKVH

AT3G53600.1 C2H2-type zinc finger family protein4.5e-1246.27Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRK----IRTEDCVHQK----VFQCPFCPKVFESGQALGGHKKVH
        F+CKTCN+ F S+QALGGH+ASH+K    +  E   H+     + +C  C ++F +GQALGGH + H
Subjt:  FKCKTCNKSFRSYQALGGHKASHRK----IRTEDCVHQK----VFQCPFCPKVFESGQALGGHKKVH

AT3G60580.1 C2H2-like zinc finger protein6.7e-1639.17Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRKIRTED---------------CVHQKVFQCPFCPKVFESGQALGGHKKVHFF--------KKIYPKKFGK-NSIDL
        +KC+TC K F+SYQALGGH+ASH+K R  +                V +++ +CP C +VF SGQALGGHK+ H          ++++  +  K   IDL
Subjt:  FKCKTCNKSFRSYQALGGHKASHRKIRTED---------------CVHQKVFQCPFCPKVFESGQALGGHKKVHFF--------KKIYPKKFGK-NSIDL

Query:  NRPPPAYDYDEDDEDEVSEI
        N P P       +EDEVS +
Subjt:  NRPPPAYDYDEDDEDEVSEI

AT5G61470.1 C2H2-like zinc finger protein3.4e-1242.86Show/hide
Query:  FKCKTCNKSFRSYQALGGHKASHRKIR----------TEDCVHQKVFQCPFCPKVFESGQALGGHKKVHF
        + C TC K  RSYQALGGH+ SH+  R           +  + ++ ++C  C ++F SGQALGGHKK+H+
Subjt:  FKCKTCNKSFRSYQALGGHKASHRKIR----------TEDCVHQKVFQCPFCPKVFESGQALGGHKKVHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCAAATGCAAAACGTGCAACAAGTCATTTAGGTCGTATCAAGCATTGGGAGGGCACAAGGCGAGCCACAGGAAGATTAGAACAGAAGATTGTGTTCATCAGAAAGTTTT
TCAATGTCCATTTTGCCCCAAAGTGTTTGAATCTGGACAGGCACTTGGAGGGCACAAGAAGGTCCATTTCTTTAAGAAAATTTATCCTAAAAAATTTGGTAAAAACTCCA
TTGATCTCAACCGTCCACCTCCTGCTTATGATTATGATGAAGATGATGAAGATGAAGTTTCTGAAATTGAATTCTCTGCAATCTCCAAT
mRNA sequenceShow/hide mRNA sequence
TTCAAATGCAAAACGTGCAACAAGTCATTTAGGTCGTATCAAGCATTGGGAGGGCACAAGGCGAGCCACAGGAAGATTAGAACAGAAGATTGTGTTCATCAGAAAGTTTT
TCAATGTCCATTTTGCCCCAAAGTGTTTGAATCTGGACAGGCACTTGGAGGGCACAAGAAGGTCCATTTCTTTAAGAAAATTTATCCTAAAAAATTTGGTAAAAACTCCA
TTGATCTCAACCGTCCACCTCCTGCTTATGATTATGATGAAGATGATGAAGATGAAGTTTCTGAAATTGAATTCTCTGCAATCTCCAAT
Protein sequenceShow/hide protein sequence
FKCKTCNKSFRSYQALGGHKASHRKIRTEDCVHQKVFQCPFCPKVFESGQALGGHKKVHFFKKIYPKKFGKNSIDLNRPPPAYDYDEDDEDEVSEIEFSAISN