CuGenDBv2

Gene ID	MS017800
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NERD domain-containing protein
Genome location	scaffold373:2634940..2643814
RNA-Seq Expression	MS017800
Synteny	MS017800
Gene Ontology terms	NA
InterPro domains	IPR011528 - Nuclease-related domain, NERD

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004148346.1 uncharacterized protein LOC101206635 isoform X1 [Cucumis sativus]

1.4e-147

77.3

Show/hide

Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK
        MWAEILCGF+AFRVLRRFF P+DEMEIE  DS+A+FA AS                          RLEKLYGG+ F+GLRIPDADTG RQSIDMVLVTK
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK

Query:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP
        G+AVVI VKN SG VS+SADGSWICEGDG Q+SEI+PDPV ETRRW SILESY EQRGVALPEGYLS KVLLPNPKFRT+H NYFPSEV+ YDQ+I LKP
Subjt:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP

Query:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR
        EPKS FSGWIK A  GGKKEMQ+SMDQKLNFVLNTAPMWDRLEL GNN +LGEF+EFK KKEDMQALR+I+RSKVSCI+IQ++R I FVPSRFRVLYS R
Subjt:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR

Query:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA
        DYRN+GASASEWKEVTVGSST+VVFQMEYSSKVRK+KIS+I SLSLSA
Subjt:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA

XP_022157167.1 uncharacterized protein LOC111023945 [Momordica charantia]

2.9e-174

92.24

Show/hide

Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK
        MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAAS                          RLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK

Query:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP
        GDAVVISVKN SGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP
Subjt:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP

Query:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR
        EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR
Subjt:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR

Query:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA
        DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA
Subjt:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA

XP_022957721.1 uncharacterized protein LOC111459180 [Cucurbita moschata]

4.4e-146

76.15

Show/hide

Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK
        M+ EILCGFIAFR+LRRFF  +DE+EIE SDSNA+FA AS                          RLEK+Y G++F+GLRIPDADTG RQSIDMVLVTK
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK

Query:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP
        G+AVV+ VKN SG VS+SADGSWICEGDG Q+SEI+PDPV ETRRWASILESYLE+RGVALPEGYLS KVLLPNPKFRTVH NYFPSEV+TYDQ++QLKP
Subjt:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP

Query:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR
        EPKS FSGWIK ALRGGKKE+QES D+KLNFVLNTAPMWDRLELKGNN +LGEF+EFKGKKEDMQALR+IKRSKVSCIVIQ+MR I F PSR RVLYS R
Subjt:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR

Query:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA
        +Y+N+G SASEWKE+T+GS+T+VVFQMEYSSKVRKIKIS+I SLSLSA
Subjt:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA

XP_022995191.1 uncharacterized protein LOC111490811 [Cucurbita maxima]

5.8e-146

76.44

Show/hide

Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK
        MW EILCGFIAFR+LRRFF   D +EIE SDSNA+FA AS                          RLEK+Y G++F+GLRIPDADTG RQSIDMVLVTK
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK

Query:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP
        G+AVV+ VKN SG VS+SADGSWICEGDG Q+SEI+PDPV ETRRWASILESYLE+RGVALPEGYLS KVLLPNPKFRTVH NYFPSEV+TYDQ+IQLKP
Subjt:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP

Query:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR
        E KS FSGWIK ALRGGKKEMQES D+KLNFVLNTAPMWDRLELKGNN +LGEF+EFKGKKEDMQALR+IKRSKVSCIVIQ+MR I F PSR RVLYS R
Subjt:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR

Query:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA
        +Y+N+G SASEWKE+T+GS+T+VVFQMEYSSKVRKIKIS+I SLSLSA
Subjt:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA

XP_023534697.1 uncharacterized protein LOC111796185 [Cucurbita pepo subsp. pepo]

1.7e-145

75.86

Show/hide

Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK
        M+ EILCGFIAFR+LRRFF  +DE+EIE SDSNA+FA AS                          RLEK+Y G++F+GLRIPDADTG RQSIDMVLVTK
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK

Query:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP
        G+AVV+ VKN SG VS+SADGSWICEGDG Q+SEI+PDPV ETRRWASILESYLE+RGVALPEGYLS KVLLPNPKFRTVH NYFPSEV+TYDQ++QLKP
Subjt:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP

Query:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR
        EPKS FSGWIK ALRGGKKE+QES D+KLNFVLNTAPMWDRLELKGNN +LGEF+EFKGKKEDMQ LR+IKRSKVSCIVIQ+MR I F PSR RVLYS R
Subjt:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR

Query:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA
        +Y+N+G SASEWKE+T+GS+T+VVFQMEYSSKVRKIKIS+I SLSLSA
Subjt:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LKG9 NERD domain-containing protein

6.6e-148

77.3

Show/hide

Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK
        MWAEILCGF+AFRVLRRFF P+DEMEIE  DS+A+FA AS                          RLEKLYGG+ F+GLRIPDADTG RQSIDMVLVTK
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK

Query:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP
        G+AVVI VKN SG VS+SADGSWICEGDG Q+SEI+PDPV ETRRW SILESY EQRGVALPEGYLS KVLLPNPKFRT+H NYFPSEV+ YDQ+I LKP
Subjt:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP

Query:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR
        EPKS FSGWIK A  GGKKEMQ+SMDQKLNFVLNTAPMWDRLEL GNN +LGEF+EFK KKEDMQALR+I+RSKVSCI+IQ++R I FVPSRFRVLYS R
Subjt:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR

Query:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA
        DYRN+GASASEWKEVTVGSST+VVFQMEYSSKVRK+KIS+I SLSLSA
Subjt:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA

A0A6J1DTU9 uncharacterized protein LOC111023945

1.4e-174

92.24

Show/hide

Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK
        MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAAS                          RLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK

Query:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP
        GDAVVISVKN SGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP
Subjt:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP

Query:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR
        EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR
Subjt:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR

Query:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA
        DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA
Subjt:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA

A0A6J1H014 uncharacterized protein LOC111459180

2.1e-146

76.15

Show/hide

Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK
        M+ EILCGFIAFR+LRRFF  +DE+EIE SDSNA+FA AS                          RLEK+Y G++F+GLRIPDADTG RQSIDMVLVTK
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK

Query:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP
        G+AVV+ VKN SG VS+SADGSWICEGDG Q+SEI+PDPV ETRRWASILESYLE+RGVALPEGYLS KVLLPNPKFRTVH NYFPSEV+TYDQ++QLKP
Subjt:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP

Query:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR
        EPKS FSGWIK ALRGGKKE+QES D+KLNFVLNTAPMWDRLELKGNN +LGEF+EFKGKKEDMQALR+IKRSKVSCIVIQ+MR I F PSR RVLYS R
Subjt:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR

Query:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA
        +Y+N+G SASEWKE+T+GS+T+VVFQMEYSSKVRKIKIS+I SLSLSA
Subjt:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA

A0A6J1K1B0 uncharacterized protein LOC111490811

2.8e-146

76.44

Show/hide

Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK
        MW EILCGFIAFR+LRRFF   D +EIE SDSNA+FA AS                          RLEK+Y G++F+GLRIPDADTG RQSIDMVLVTK
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK

Query:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP
        G+AVV+ VKN SG VS+SADGSWICEGDG Q+SEI+PDPV ETRRWASILESYLE+RGVALPEGYLS KVLLPNPKFRTVH NYFPSEV+TYDQ+IQLKP
Subjt:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP

Query:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR
        E KS FSGWIK ALRGGKKEMQES D+KLNFVLNTAPMWDRLELKGNN +LGEF+EFKGKKEDMQALR+IKRSKVSCIVIQ+MR I F PSR RVLYS R
Subjt:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR

Query:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA
        +Y+N+G SASEWKE+T+GS+T+VVFQMEYSSKVRKIKIS+I SLSLSA
Subjt:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA

A0A6P9DW32 uncharacterized protein LOC109012405

4.3e-123

64.94

Show/hide

Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK
        MW EI CG I +R+ R FF   D +++E SDS A+F+ A+                          RLEKLY G+V++GLRIPDADTGSRQ+IDMVLVTK
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK

Query:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP
        G+AVVISV N SG VS++ADGSW+CEG    R+E + DPVVET+R ASILESYLEQRGVALPEGYLSCKV+LPNPK   +H +YFPSEV+TYDQ++QLKP
Subjt:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP

Query:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR
        EPKS FSGW+KGA RGGKKEMQES+ QKLNF+L TAPMWDRLELKGN + LGEF+EFKGK+ED+QAL+ IKRSKVS +VIQ+  M    PS  +VLYS R
Subjt:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR

Query:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA
        DYR++GASASEWKEVTV SST V+FQ E S+KVRK K+S++ SL L+A
Subjt:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G65020.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

1.8e-105

55.46

Show/hide

Query:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK
        MW EI+CG + ++++RRFF   +  ++E SDS A+F+ A                           RLEKLYGG+ ++GLRIPDADT SRQ ID+VLVTK
Subjt:  MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTK

Query:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP
        GD VVISVKN SG+V++++DGSW+CEG     +E  PDP+ E ++ AS+LESYLEQRGV L EG +SCKV++PNP FRT+H   FPSEV+TY+ + QLKP
Subjt:  GDAVVISVKNFSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKP

Query:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR
          KS  SGW+KGA   G KEMQES  QKLNF+L TAP WDR+ELK +  +LGEF+EFKGK+ED  ALR+IKRSKV  + IQ+  M    PSR +VLYS R
Subjt:  EPKSTFSGWIKGALRGGKKEMQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSAR

Query:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA
        DYR++G+S +E KEVTV SST V+FQ   S+K++K K+S++ S+SLSA
Subjt:  DYRNDGASASEWKEVTVGSSTVVVFQMEYSSKVRKIKISTIASLSLSA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGGGCTGAGATACTCTGTGGTTTTATAGCGTTTAGAGTGCTCAGGCGATTCTTTTGTCCAAAGGATGAAATGGAGATCGAGGCCTCCGATTCTAATGCCATTTTCGC
TGCCGCTTCTAGGTATAAAAACACTTCTATTTCTGGCAGGAATAAGGTTTATAATTTGATAATAAATTTTCGTGTTTCTTCTTTTGGTAGATTAGAAAAGCTCTATGGTG
GAAGGGTTTTTTTGGGGCTTCGAATTCCAGATGCTGACACTGGTTCGCGACAGAGTATTGATATGGTTCTTGTAACTAAAGGGGATGCAGTGGTGATATCTGTAAAAAAT
TTTTCAGGTTTGGTTTCCATCAGTGCTGATGGAAGCTGGATCTGTGAAGGTGATGGTACACAAAGGTCAGAGATTATGCCTGATCCAGTGGTTGAGACACGAAGATGGGC
CTCAATTCTCGAGTCATACCTTGAACAGAGAGGAGTTGCGCTGCCAGAAGGATATTTATCGTGTAAAGTTTTGCTTCCCAATCCAAAATTTCGAACAGTTCATTTGAACT
ATTTTCCTTCTGAAGTCGTCACATATGATCAGTATATACAGTTGAAACCAGAACCAAAAAGTACGTTCTCCGGTTGGATCAAGGGTGCTTTGCGTGGAGGAAAAAAAGAG
ATGCAGGAATCTATGGATCAGAAGCTAAATTTTGTCCTCAACACTGCACCCATGTGGGATAGGCTGGAACTTAAAGGAAATAATTTTATTCTGGGAGAATTCATGGAGTT
CAAAGGGAAAAAGGAAGATATGCAGGCTTTGAGAGATATCAAAAGATCAAAAGTTAGTTGCATAGTCATCCAGAGGATGAGAATGATCAGATTTGTTCCTTCAAGATTTC
GAGTTTTATACTCTGCTCGGGATTATCGAAACGACGGGGCCTCTGCTTCTGAGTGGAAGGAAGTAACGGTAGGATCCAGTACAGTGGTAGTATTTCAGATGGAATATTCT
TCTAAAGTTCGAAAAATCAAGATCTCTACAATTGCATCTCTGTCATTGAGTGCC

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MWAEILCGFIAFRVLRRFFCPKDEMEIEASDSNAIFAAASRYKNTSISGRNKVYNLIINFRVSSFGRLEKLYGGRVFLGLRIPDADTGSRQSIDMVLVTKGDAVVISVKN
FSGLVSISADGSWICEGDGTQRSEIMPDPVVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFRTVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGALRGGKKE
MQESMDQKLNFVLNTAPMWDRLELKGNNFILGEFMEFKGKKEDMQALRDIKRSKVSCIVIQRMRMIRFVPSRFRVLYSARDYRNDGASASEWKEVTVGSSTVVVFQMEYS
SKVRKIKISTIASLSLSA

MS017800 (gene) of Bitter gourd (TR) v1 genome