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MS017819 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017819
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF565)
Genome locationscaffold373:2896613..2897083
RNA-Seq ExpressionMS017819
SyntenyMS017819
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007572 - Uncharacterised protein family Ycf20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579671.1 hypothetical protein SDJN03_24119, partial [Cucurbita argyrosperma subsp. sororia]2.4e-6788.54Show/hide
Query:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG
        MA+S SL+STGLL+  F P+ NASY  YDMIK RPSPRSL IKAVQD GGP  RRLVDIIRLVPE+SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG
Subjt:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG

Query:  ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_004143642.1 uncharacterized protein ycf20 [Cucumis sativus]1.6e-6687.97Show/hide
Query:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPS-PRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSF
        MA+S SL+ T LL+ GF PKMN SY  YDM+K RPS PRS R+KAVQD GGP  RRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSF
Subjt:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPS-PRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSF

Query:  GALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        GALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_022928979.1 uncharacterized protein ycf20 [Cucurbita moschata]4.1e-6788.54Show/hide
Query:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG
        MA+S SL+STGLL+  F P+ NASY  YD+IK RPSPRSL IKAVQD GGP  RRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG
Subjt:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG

Query:  ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_022969949.1 uncharacterized protein ycf20 [Cucurbita maxima]3.1e-6788.54Show/hide
Query:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG
        MA+S SL+STGLL+  F P+ NASY  YD+IK RPSPRSL IKAVQD GGP  RRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG
Subjt:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG

Query:  ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

XP_023549885.1 uncharacterized protein LOC111808248 [Cucurbita pepo subsp. pepo]7.0e-6787.9Show/hide
Query:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG
        MA+S SL+STGLL+  F P+ NASY  YD+IK RPSPRSL IKAVQD GGP  RRLVDIIRLVPE+SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG
Subjt:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG

Query:  ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

TrEMBL top hitse value%identityAlignment
A0A0A0KPS1 Uncharacterized protein7.6e-6787.97Show/hide
Query:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPS-PRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSF
        MA+S SL+ T LL+ GF PKMN SY  YDM+K RPS PRS R+KAVQD GGP  RRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSF
Subjt:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPS-PRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSF

Query:  GALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        GALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A1S3CT33 uncharacterized protein ycf20 isoform X11.3e-6687.97Show/hide
Query:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPS-PRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSF
        MA+S SL+ TGLL+ GF  KMN+SY  YDM+K RPS PRS R+KAVQD GGP  RRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSF
Subjt:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPS-PRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSF

Query:  GALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        GALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  GALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A5D3BMH1 Ycf20-like protein isoform X11.4e-6092.03Show/hide
Query:  MNASYLSYDMIKPRPS-PRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEY
        MN SY  YDM+K RPS PRS R+KAVQD GGP  RRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEY
Subjt:  MNASYLSYDMIKPRPS-PRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEY

Query:  VTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        VTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  VTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A6J1ESY7 uncharacterized protein ycf202.0e-6788.54Show/hide
Query:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG
        MA+S SL+STGLL+  F P+ NASY  YD+IK RPSPRSL IKAVQD GGP  RRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG
Subjt:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG

Query:  ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

A0A6J1I440 uncharacterized protein ycf201.5e-6788.54Show/hide
Query:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG
        MA+S SL+STGLL+  F P+ NASY  YD+IK RPSPRSL IKAVQD GGP  RRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG
Subjt:  MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFG

Query:  ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Subjt:  ALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

SwissProt top hitse value%identityAlignment
P51214 Uncharacterized protein ycf205.9e-0847.44Show/hide
Query:  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS-RPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        G ISLL GF+++  +S   G  G   +IAA + V   E V++  YS + K    I LLNN K+G TYGLF+DAFKL S
Subjt:  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS-RPKVTFPIALLNNFKMGFTYGLFIDAFKLAS

P72983 Ycf20-like protein2.6e-0835.24Show/hide
Query:  RLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR--PKVTFPIALLNNFKMGFTYGLFIDA
        RL  I+ +  +    +FR+P RR     +S L GF+V   ++ + G     DV+ A   +L  E V R++Y R          +LN FKMG +Y LF++A
Subjt:  RLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR--PKVTFPIALLNNFKMGFTYGLFIDA

Query:  FKLAS
        FKL S
Subjt:  FKLAS

Q1XDS2 Uncharacterized protein ycf205.3e-0942.27Show/hide
Query:  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPK-VTFPIALLNNFKMGFTYGLFIDAFKLAS
        L+  L+   + S S     G ISLL GF+++  +S   G  G   +IAA + V  TE  ++  YS  K +   I L NNFK+G TYGLF+DAFKL S
Subjt:  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPK-VTFPIALLNNFKMGFTYGLFIDAFKLAS

Q9MUL5 Uncharacterized protein ycf203.0e-0437.8Show/hide
Query:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR----PKVTFPIALL-----NNFKMGFTYGLFIDAFKLAS
        LL GF++A  ++  FG  G  DV+ A + V + E +    YS+     K  F I+ L     N  K+G  +GLF+DAFKL S
Subjt:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR----PKVTFPIALL-----NNFKMGFTYGLFIDAFKLAS

Arabidopsis top hitse value%identityAlignment
AT1G65420.1 Protein of unknown function (DUF565)1.8e-0435Show/hide
Query:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP-------KVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LL GFY A  ++   G  G  DV+ A + V   E +    Y +P       K+   +  +N +K G   GLF+DAFKL S
Subjt:  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP-------KVTFPIALLNNFKMGFTYGLFIDAFKLAS

AT5G43050.1 Protein of unknown function (DUF565)2.3e-5270.19Show/hide
Query:  MARSVSLLSTGL----LSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTIS
        MA S+S +ST L    L+   C     +++S    + R   RS+R  A+Q+  GP  RRL+DIIR VPE+SRNYF+ PSRR LFGGISLLGGFYVAQTIS
Subjt:  MARSVSLLSTGL----LSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTIS

Query:  LSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS
        LSFGALGVNDVIAAV+CVLLTEYVTRFYYSR  VTFPIALLNNFKMGFTYGLFIDAFKLAS
Subjt:  LSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACGGTCTGTAAGTTTACTCTCTACTGGCCTCCTAAGTTGTGGCTTTTGTCCCAAAATGAATGCTTCATATTTGAGTTATGACATGATAAAACCACGACCATCCCC
TCGTAGTCTTCGTATCAAAGCTGTGCAAGATGATGGAGGTCCTCGTAGTCGTAGGTTAGTTGATATCATTAGACTTGTGCCCGAGCTCTCGAGAAATTACTTTCGAAGCC
CCTCGAGGAGGGCTCTGTTTGGAGGGATCTCATTATTGGGTGGGTTTTATGTAGCACAGACTATATCATTGTCATTTGGAGCTTTAGGAGTAAATGATGTGATTGCTGCT
GTGGTATGTGTTCTCCTTACAGAGTACGTTACCCGGTTTTATTATAGTCGACCGAAAGTAACTTTCCCCATAGCTCTACTCAACAACTTCAAAATGGGTTTCACTTATGG
TCTCTTTATTGATGCTTTCAAACTTGCTAGT
mRNA sequenceShow/hide mRNA sequence
ATGGCACGGTCTGTAAGTTTACTCTCTACTGGCCTCCTAAGTTGTGGCTTTTGTCCCAAAATGAATGCTTCATATTTGAGTTATGACATGATAAAACCACGACCATCCCC
TCGTAGTCTTCGTATCAAAGCTGTGCAAGATGATGGAGGTCCTCGTAGTCGTAGGTTAGTTGATATCATTAGACTTGTGCCCGAGCTCTCGAGAAATTACTTTCGAAGCC
CCTCGAGGAGGGCTCTGTTTGGAGGGATCTCATTATTGGGTGGGTTTTATGTAGCACAGACTATATCATTGTCATTTGGAGCTTTAGGAGTAAATGATGTGATTGCTGCT
GTGGTATGTGTTCTCCTTACAGAGTACGTTACCCGGTTTTATTATAGTCGACCGAAAGTAACTTTCCCCATAGCTCTACTCAACAACTTCAAAATGGGTTTCACTTATGG
TCTCTTTATTGATGCTTTCAAACTTGCTAGT
Protein sequenceShow/hide protein sequence
MARSVSLLSTGLLSCGFCPKMNASYLSYDMIKPRPSPRSLRIKAVQDDGGPRSRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAA
VVCVLLTEYVTRFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS