CuGenDBv2

Gene ID	MS017820
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ABC transporter B family member 28
Genome location	scaffold373:2908578..2910089
RNA-Seq Expression	MS017820
Synteny	MS017820
Gene Ontology terms	GO:0055085 - transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domains	IPR003439 - ABC transporter-like, ATP-binding domain IPR003593 - AAA+ ATPase domain IPR017871 - ABC transporter-like, conserved site IPR027417 - P-loop containing nucleoside triphosphate hydrolase IPR039421 - Type 1 protein exporter

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0055155.1 ABC transporter B family member 28 [Cucumis melo var. makuwa]

1.7e-120

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DV FSYPLRPD+NVL+GLNLTLKCGTITALVG SGAGKSTIVQLL+RFYEPKQGQIKVS EDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
        NVTKDEVIKAAKAANAHDFI++LPQGYDTPVGERGGLLSGGQRQRIAIARALLKN+PILILDE  ATSALDAVSERLVQDALNHLM+GRTTLVIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
        VQNAHQIA+C DGKIVELGTH ELLAQKG+YASLV TQRLAFE
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE

XP_004143641.1 ABC transporter B family member 28 [Cucumis sativus]

5.9e-121

93.42

Show/hide

Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DV FSYPLRPD+NVL+GLNLTLKCGTITALVG SGAGKSTIVQLL+RFYEPKQGQIKVS EDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
        NVTKDEVIKAAKAANAHDFI++LPQGYDTPVGERGGLLSGGQRQRIAIARALLKN+PILILDE  ATSALDAVSERLVQDALNHLM+GRTTLVIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
        VQNAHQIA+C DGKIVELGTH ELLAQKGQYASLV TQRLAFE
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE

XP_008467244.1 PREDICTED: ABC transporter B family member 28 [Cucumis melo]

1.7e-120

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DV FSYPLRPD+NVL+GLNLTLKCGTITALVG SGAGKSTIVQLL+RFYEPKQGQIKVS EDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
        NVTKDEVIKAAKAANAHDFI++LPQGYDTPVGERGGLLSGGQRQRIAIARALLKN+PILILDE  ATSALDAVSERLVQDALNHLM+GRTTLVIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
        VQNAHQIA+C DGKIVELGTH ELLAQKG+YASLV TQRLAFE
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE

XP_022159501.1 ABC transporter B family member 28 [Momordica charantia]

3.8e-128

99.18

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
        NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDE  ATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
        VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE

XP_038874659.1 ABC transporter B family member 28 isoform X1 [Benincasa hispida]

3.8e-120

92.18

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DV FSYPLRPD+++L+GLNLTLKCGT+TALVGPSGAGKSTIVQLL+RFYEPKQGQIKVS EDIRAFDK EWARAVSIVNQEPVLFSVSVGENIAYGLPDD
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
        NVTKDEVIKAAKAANAHDFI++LPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDE  ATSALDAVSERLVQDALNHLM+GRTTLVIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
        VQNAHQIA+C DGKIVELGTH ELLAQKG+YASLV TQRLAFE
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLA7 Uncharacterized protein

2.8e-121

93.42

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DV FSYPLRPD+NVL+GLNLTLKCGTITALVG SGAGKSTIVQLL+RFYEPKQGQIKVS EDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
        NVTKDEVIKAAKAANAHDFI++LPQGYDTPVGERGGLLSGGQRQRIAIARALLKN+PILILDE  ATSALDAVSERLVQDALNHLM+GRTTLVIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
        VQNAHQIA+C DGKIVELGTH ELLAQKGQYASLV TQRLAFE
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE

A0A1S3CT41 ABC transporter B family member 28

8.2e-121

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DV FSYPLRPD+NVL+GLNLTLKCGTITALVG SGAGKSTIVQLL+RFYEPKQGQIKVS EDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
        NVTKDEVIKAAKAANAHDFI++LPQGYDTPVGERGGLLSGGQRQRIAIARALLKN+PILILDE  ATSALDAVSERLVQDALNHLM+GRTTLVIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
        VQNAHQIA+C DGKIVELGTH ELLAQKG+YASLV TQRLAFE
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE

A0A5A7UND8 ABC transporter B family member 28

8.2e-121

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DV FSYPLRPD+NVL+GLNLTLKCGTITALVG SGAGKSTIVQLL+RFYEPKQGQIKVS EDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
        NVTKDEVIKAAKAANAHDFI++LPQGYDTPVGERGGLLSGGQRQRIAIARALLKN+PILILDE  ATSALDAVSERLVQDALNHLM+GRTTLVIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
        VQNAHQIA+C DGKIVELGTH ELLAQKG+YASLV TQRLAFE
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE

A0A5D3BMA3 ABC transporter B family member 28

8.2e-121

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DV FSYPLRPD+NVL+GLNLTLKCGTITALVG SGAGKSTIVQLL+RFYEPKQGQIKVS EDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
        NVTKDEVIKAAKAANAHDFI++LPQGYDTPVGERGGLLSGGQRQRIAIARALLKN+PILILDE  ATSALDAVSERLVQDALNHLM+GRTTLVIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
        VQNAHQIA+C DGKIVELGTH ELLAQKG+YASLV TQRLAFE
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE

A0A6J1E443 ABC transporter B family member 28

1.8e-128

99.18

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
        NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDE  ATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
        VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE

SwissProt top hits

e value

%identity

Alignment

Q54BT3 ABC transporter B family member 2

3.9e-67

54.39

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        ++ FSYP RPD+ + N  NLT+K GT  ALVG SG GKS+++ LL RFY+P +G++ +   +I+  +     R + +V+QEPVLF+ S+ ENI YG  ++
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
        N T D++I+A K ANAHDFI  LP+GYDT VGE+G  +SGGQ+QRIAIARA++K+  IL+LDE  ATSALD+ +E LVQ ++  LM GRTT+VIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQR
        +Q+A QIA    G IVE+GTH EL A  G Y  LV  Q+
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQR

Q8LPQ6 ABC transporter B family member 28

5.5e-106

80.25

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DV F+YPLRPD+ VL+GL+LTL  GT+TALVG SGAGKSTIVQLL+RFYEP QG+I V  ED+R FDK EWA+ VSIVNQEPVLFS+SV ENIAYGLP++
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
        +V+KD++IKAAKAANAHDFI++LPQGYDT VGERGGLLSGGQRQR+AIAR+LLKNAPILILDE  ATSALDAVSERLVQ ALN LM+ RTTLVIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
        VQ+A+QIA C DGKI+ELGTH EL+AQKG YASLVGTQRLAFE
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE

Q8T9W4 ABC transporter B family member 3

3.5e-68

57.56

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DV F YP RPD+ + NG NL +K G    LVG SG GKSTI+ LL RFY+P QG+I +  EDIR F+ R   + + +VNQEPVLF+ ++ ENI YG   +
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
          T+DE+ +AAK ANAH FI  LPQGY+T VGE+G  +SGGQRQRIAIARA++KN  IL+LDE  +TSALDA S +LVQ+AL+ LM+GRTT+VIAH LST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQ
        ++NA  I Y   G  VE GTH EL+A++G Y  LV  Q
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQ

Q9LHD1 ABC transporter B family member 15

1.5e-66

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DV FSYP RPD+ +    ++ ++ G  TA+VGPSG+GKSTI+ L+ RFY+P +G +K+   DIR++  R   R +++V+QEP LF+ ++ ENI YG   D
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
         + + E+I+AAKAANAHDFI +L +GYDT  G+RG  LSGGQ+QRIAIARA+LKN  +L+LDE  ATSALD+ SER+VQDAL  +M GRT++VIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQ--KGQYASLVGTQ
        +QN   IA    GK+VE GTH  LL++   G Y SLV  Q
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQ--KGQYASLVGTQ

Q9LSJ2 ABC transporter B family member 22

3.0e-67

54.51

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        +V F+YP RPD+ +    ++ +  G  TA+VGPSG+GKSTI+ L+ RFY+P +G +K+   DIR++  R   + + +V+QEP+LF+ ++ ENI YG   D
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
         + + E+I+AAKAANAHDFIVTL  GYDT  G+RG  LSGGQ+QRIAIARA+LKN  +L+LDE  ATSALD  SER+VQDAL  LM GRT++VIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQ--KGQYASLVGTQRLAF
        +QN   I     GK+VE GTH  LLA+   G Y SLV  QR  +
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQ--KGQYASLVGTQRLAF

Arabidopsis top hits

e value

%identity

Alignment

AT3G28345.1 ABC transporter family protein

1.0e-67

Show/hide

Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DV FSYP RPD+ +    ++ ++ G  TA+VGPSG+GKSTI+ L+ RFY+P +G +K+   DIR++  R   R +++V+QEP LF+ ++ ENI YG   D
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
         + + E+I+AAKAANAHDFI +L +GYDT  G+RG  LSGGQ+QRIAIARA+LKN  +L+LDE  ATSALD+ SER+VQDAL  +M GRT++VIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQ--KGQYASLVGTQ
        +QN   IA    GK+VE GTH  LL++   G Y SLV  Q
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQ--KGQYASLVGTQ

AT3G28380.1 P-glycoprotein 17

2.0e-66

53.11

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        +V F+YP RPD+ +    ++ +  G  TA+VG SG+GKSTI+ L+ RFY+P +G +K+   DIR++  R   + +S+V+QEP+LF+ ++ ENI YG   D
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
         + + E+I+AAKAANAHDFI +L  GYDT  G++G  LSGGQ+QRIAIARA+LKN  +L+LDE  ATSALD+ SER+VQDAL  +M GRT+++IAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQ--KGQYASLVGTQR
        +QN   I     GKIVE GTH  LL +   G Y SL G QR
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQ--KGQYASLVGTQR

AT3G28415.1 ABC transporter family protein

2.1e-68

54.51

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        +V F+YP RPD+ +    ++ +  G  TA+VGPSG+GKSTI+ L+ RFY+P +G +K+   DIR++  R   + + +V+QEP+LF+ ++ ENI YG   D
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
         + + E+I+AAKAANAHDFIVTL  GYDT  G+RG  LSGGQ+QRIAIARA+LKN  +L+LDE  ATSALD  SER+VQDAL  LM GRT++VIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQ--KGQYASLVGTQRLAF
        +QN   I     GK+VE GTH  LLA+   G Y SLV  QR  +
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQ--KGQYASLVGTQRLAF

AT4G25450.1 non-intrinsic ABC protein 8

3.9e-107

80.25

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DV F+YPLRPD+ VL+GL+LTL  GT+TALVG SGAGKSTIVQLL+RFYEP QG+I V  ED+R FDK EWA+ VSIVNQEPVLFS+SV ENIAYGLP++
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
        +V+KD++IKAAKAANAHDFI++LPQGYDT VGERGGLLSGGQRQR+AIAR+LLKNAPILILDE  ATSALDAVSERLVQ ALN LM+ RTTLVIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
        VQ+A+QIA C DGKI+ELGTH EL+AQKG YASLVGTQRLAFE
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE

AT4G25450.3 non-intrinsic ABC protein 8

3.9e-107

80.25

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Query:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD
        DV F+YPLRPD+ VL+GL+LTL  GT+TALVG SGAGKSTIVQLL+RFYEP QG+I V  ED+R FDK EWA+ VSIVNQEPVLFS+SV ENIAYGLP++
Subjt:  DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDD

Query:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST
        +V+KD++IKAAKAANAHDFI++LPQGYDT VGERGGLLSGGQRQR+AIAR+LLKNAPILILDE  ATSALDAVSERLVQ ALN LM+ RTTLVIAHRLST
Subjt:  NVTKDEVIKAAKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLST

Query:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE
        VQ+A+QIA C DGKI+ELGTH EL+AQKG YASLVGTQRLAFE
Subjt:  VQNAHQIAYCCDGKIVELGTHFELLAQKGQYASLVGTQRLAFE

Sequences

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CDS sequence

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GATGTGAGCTTTTCTTATCCTTTGAGACCGGACATTAATGTTCTTAATGGTTTGAATTTAACCCTTAAATGCGGGACCATAACGGCTTTAGTCGGTCCTAGTGGAGCAGG
AAAGAGTACAATAGTACAGCTATTGTCACGTTTTTATGAGCCAAAGCAAGGTCAGATAAAAGTTTCCAGCGAGGATATTCGAGCATTTGATAAGAGAGAATGGGCTCGAG
CTGTTTCGATTGTGAATCAAGAACCCGTTCTTTTTTCGGTGTCTGTTGGGGAGAATATTGCATATGGTCTTCCAGATGATAATGTAACAAAGGATGAGGTGATAAAGGCA
GCCAAAGCTGCAAACGCCCATGATTTCATTGTTACACTTCCTCAGGGCTATGACACGCCGGTCGGTGAACGTGGAGGCCTTCTAAGTGGTGGCCAGAGACAGAGAATTGC
TATTGCGAGAGCCTTGCTCAAGAATGCTCCAATCCTTATACTTGATGAGGCAAGTGCGACCAGTGCACTCGATGCAGTCAGTGAGCGACTGGTTCAGGACGCTCTGAACC
ATCTAATGAGGGGAAGGACGACATTGGTGATCGCACATCGGTTGAGCACGGTCCAAAATGCTCACCAAATTGCATATTGTTGTGATGGGAAAATTGTTGAGCTGGGAACT
CATTTCGAACTTCTGGCTCAGAAAGGTCAGTATGCTTCATTAGTTGGCACACAAAGGCTGGCATTTGAG

mRNA sequence

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Protein sequence

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DVSFSYPLRPDINVLNGLNLTLKCGTITALVGPSGAGKSTIVQLLSRFYEPKQGQIKVSSEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDDNVTKDEVIKA
AKAANAHDFIVTLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEASATSALDAVSERLVQDALNHLMRGRTTLVIAHRLSTVQNAHQIAYCCDGKIVELGT
HFELLAQKGQYASLVGTQRLAFE

MS017820 (gene) of Bitter gourd (TR) v1 genome