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MS017822 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017822
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome locationscaffold373:2913685..2920049
RNA-Seq ExpressionMS017822
SyntenyMS017822
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143640.2 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis sativus]4.0e-8089.24Show/hide
Query:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV
        MASVVRG+LKSIKDKGIG FWRELKEEGY         LQTKIHNIGATLVGVDKFGNKYYQ+VDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHH+
Subjt:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV

Query:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEH+ENFSGEG+E IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_008467243.1 PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis melo]3.6e-8190.51Show/hide
Query:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV
        MASVVRG+LKSIKDKGIG FWRELKEEGY         LQTKIHNIGATLVGVDKFGNKYYQRVDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHH+
Subjt:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV

Query:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEH+ENFSGEG+EFIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_022159660.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Momordica charantia]3.9e-8393.67Show/hide
Query:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV
        MASVVRGVLKSIKDKGIGNFWRELKEEGY         LQTKIHNIGATLVG+DKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV
Subjt:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV

Query:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_023550886.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 isoform X2 [Cucurbita pepo subsp. pepo]6.9e-8092.62Show/hide
Query:  MASVVRGVLKSIKDKGIGNFWRELKEEGYLQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTDHTGDELL
        MASVVRG+LKSIKDKGIG F R+LKEEGYLQTKIHNIGATLVGVDKFGNKYYQ++DEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLH++TDHTGDELL
Subjt:  MASVVRGVLKSIKDKGIGNFWRELKEEGYLQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTDHTGDELL

Query:  MLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
        MLKPSRYGIEH+ENFSGEG+E IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  MLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS

XP_038875755.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Benincasa hispida]3.6e-8190.51Show/hide
Query:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV
        MASVVRG+LKSIKDKGIG FWRELKEEGY         LQTKIHNIGATLVGVDKFGNKYYQRVDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHH+
Subjt:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV

Query:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEH+ENFSGEG+EFIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS

TrEMBL top hitse value%identityAlignment
A0A0A0KNC9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.9e-8089.24Show/hide
Query:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV
        MASVVRG+LKSIKDKGIG FWRELKEEGY         LQTKIHNIGATLVGVDKFGNKYYQ+VDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHH+
Subjt:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV

Query:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEH+ENFSGEG+E IYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A1S3CUD4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.8e-8190.51Show/hide
Query:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV
        MASVVRG+LKSIKDKGIG FWRELKEEGY         LQTKIHNIGATLVGVDKFGNKYYQRVDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHH+
Subjt:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV

Query:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEH+ENFSGEG+EFIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A5A7ULJ6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.8e-8190.51Show/hide
Query:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV
        MASVVRG+LKSIKDKGIG FWRELKEEGY         LQTKIHNIGATLVGVDKFGNKYYQRVDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHH+
Subjt:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV

Query:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEH+ENFSGEG+EFIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A6J1DZD3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.9e-8393.67Show/hide
Query:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV
        MASVVRGVLKSIKDKGIGNFWRELKEEGY         LQTKIHNIGATLVG+DKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV
Subjt:  MASVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHV

Query:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
        TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
Subjt:  TDHTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS

A0A6J1I451 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.6e-7992.62Show/hide
Query:  MASVVRGVLKSIKDKGIGNFWRELKEEGYLQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTDHTGDELL
        MASVVRG+LKSIKDKGIG F RE KEEGYLQTKIHNIGATLVGVDKFGNKYYQR+DEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLH++TDHTGDELL
Subjt:  MASVVRGVLKSIKDKGIGNFWRELKEEGYLQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTDHTGDELL

Query:  MLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
        MLKPSRYGIEH+ENFSGEG+E IYHSKGHALN GQRDWTRYQSWQPTKS
Subjt:  MLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS

SwissProt top hitse value%identityAlignment
Q0MQ85 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.4e-1136.19Show/hide
Query:  YLQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHVTDHTGDELLMLKPSRYGIEHRENFSGEGDE
        + +T    +G TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH +TD       +         H+ N +G  ++
Subjt:  YLQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHVTDHTGDELLMLKPSRYGIEHRENFSGEGDE

Query:  FIYHS
        ++ +S
Subjt:  FIYHS

Q0MQ86 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.8e-1136.19Show/hide
Query:  YLQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHVTDHTGDELLMLKPSRYGIEHRENFSGEGDE
        + +T    +G TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH +TD       +         H+ N +G  ++
Subjt:  YLQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHVTDHTGDELLMLKPSRYGIEHRENFSGEGDE

Query:  FIYHS
        ++ +S
Subjt:  FIYHS

Q54MV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 126.8e-1447.44Show/hide
Query:  TLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTDHTGDELLMLKPSRYGIEHRENFSG
        TLVGVDK GN+YY+  + Q  YGRHRWVEY +    + + +PPE+H W+HHV+D    E+L   P+ Y   H  N +G
Subjt:  TLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTDHTGDELLMLKPSRYGIEHRENFSG

Q9M9M9 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.5e-6470.51Show/hide
Query:  SVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTD
        +V +  L++I++KG+G F R ++EEG+         LQTKIHNIGATLVGVDKFGNKYYQ++ + TQYGRHRWVEYA K RYNASQVP EWHGWLH +TD
Subjt:  SVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTD

Query:  HTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EH+ENFSGEGD +IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS

Q9N2W7 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.5e-1341.96Show/hide
Query:  TLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKG--RYNASQVPPEWHGWLHHVTDHTGDELLMLKP---SRYGIEHRENFSGEGDEFIYHSKGHALNPG
        TLVG D FGN+YY+  +      R+RWVE+ +K    Y+A+QVPPEWH WLHH+T    D+   +KP     + +EH+EN S      IY  K +   P 
Subjt:  TLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKG--RYNASQVPPEWHGWLHHVTDHTGDELLMLKP---SRYGIEHRENFSGEGDEFIYHSKGHALNPG

Query:  QRDWTRYQSWQP
            T+ Q WQP
Subjt:  QRDWTRYQSWQP

Arabidopsis top hitse value%identityAlignment
AT3G03100.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit1.7e-6570.51Show/hide
Query:  SVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTD
        +V +  L++I++KG+G F R ++EEG+         LQTKIHNIGATLVGVDKFGNKYYQ++ + TQYGRHRWVEYA K RYNASQVP EWHGWLH +TD
Subjt:  SVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTD

Query:  HTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EH+ENFSGEGD +IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS

AT3G03100.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit8.7e-6569.87Show/hide
Query:  SVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTD
        +V +  L++I++KG+G F R ++EEG+         LQTKIHNIGATLVGVDKFGNKYYQ++ + TQYG HRWVEYA K RYNASQVP EWHGWLH +TD
Subjt:  SVVRGVLKSIKDKGIGNFWRELKEEGY---------LQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTD

Query:  HTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS
        HTGDELL LKP RYG+EH+ENFSGEGD +IYHSKGH LNPGQ++WTRYQSW PTK+
Subjt:  HTGDELLMLKPSRYGIEHRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGGTGGTGCGAGGGGTTCTGAAGTCGATCAAAGACAAAGGGATCGGCAATTTCTGGAGAGAGCTGAAGGAAGAAGGCTACTTGCAAACCAAAATCCATAACAT
TGGTGCAACACTTGTGGGTGTTGATAAATTTGGTAATAAATATTACCAGAGGGTTGATGAACAGACTCAATATGGAAGACACAGGTGGGTTGAATATGCAGAAAAGGGTC
GATATAATGCTTCTCAGGTACCACCCGAATGGCATGGTTGGCTCCACCATGTAACTGATCACACAGGAGACGAGCTTCTGATGTTGAAACCTAGTAGATATGGAATAGAG
CACAGGGAGAACTTCTCTGGGGAAGGTGACGAATTTATCTACCACTCCAAGGGACATGCCCTTAATCCTGGACAGAGAGATTGGACTCGATACCAGTCGTGGCAACCAAC
CAAGTCC
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGGTGGTGCGAGGGGTTCTGAAGTCGATCAAAGACAAAGGGATCGGCAATTTCTGGAGAGAGCTGAAGGAAGAAGGCTACTTGCAAACCAAAATCCATAACAT
TGGTGCAACACTTGTGGGTGTTGATAAATTTGGTAATAAATATTACCAGAGGGTTGATGAACAGACTCAATATGGAAGACACAGGTGGGTTGAATATGCAGAAAAGGGTC
GATATAATGCTTCTCAGGTACCACCCGAATGGCATGGTTGGCTCCACCATGTAACTGATCACACAGGAGACGAGCTTCTGATGTTGAAACCTAGTAGATATGGAATAGAG
CACAGGGAGAACTTCTCTGGGGAAGGTGACGAATTTATCTACCACTCCAAGGGACATGCCCTTAATCCTGGACAGAGAGATTGGACTCGATACCAGTCGTGGCAACCAAC
CAAGTCC
Protein sequenceShow/hide protein sequence
MASVVRGVLKSIKDKGIGNFWRELKEEGYLQTKIHNIGATLVGVDKFGNKYYQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTDHTGDELLMLKPSRYGIE
HRENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS