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MS017864 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS017864
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold373:3321581..3321919
RNA-Seq ExpressionMS017864
SyntenyMS017864
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605668.1 hypothetical protein SDJN03_02985, partial [Cucurbita argyrosperma subsp. sororia]7.6e-1548.2Show/hide
Query:  EVACDAASSTLFIFCFCNFIILTILF-----FSSFD----DDISLKPLSIVIHSNTDMQQSVCQNLMLQQHPMIDVAELPVTQN----------------
        E+A +AASSTLFIFC  N I+L ILF      SS D    DD+   PLSIVIHSNT+ Q    QN MLQ++ ++DV  +  T N                
Subjt:  EVACDAASSTLFIFCFCNFIILTILF-----FSSFD----DDISLKPLSIVIHSNTDMQQSVCQNLMLQQHPMIDVAELPVTQN----------------

Query:  -----ESESESDDDFRRRVEEFIETVNRGWKEERQSTSR
             E E E ++DF+RRVEEFIE VN GW+EERQ TSR
Subjt:  -----ESESESDDDFRRRVEEFIETVNRGWKEERQSTSR

KAG8660389.1 hypothetical protein MANES_02G153600v8 [Manihot esculenta]6.9e-0841.12Show/hide
Query:  EVACDAASSTLFIFCFCNFIILTILFF----SSFDDDISLKPLSIVIHSNTDMQQSVCQNLMLQQHPMIDVAELPVTQNESESESDDDFRRRVEEFIETV
        E    AAS++LFIFCFCN IIL +L      +SF    S  P+  V +   ++ QS      L  +   + AE  +  +E+ ++ DD+FRR+VEEFI+ +
Subjt:  EVACDAASSTLFIFCFCNFIILTILFF----SSFDDDISLKPLSIVIHSNTDMQQSVCQNLMLQQHPMIDVAELPVTQNESESESDDDFRRRVEEFIETV

Query:  NRGWKEE
        NRGWKEE
Subjt:  NRGWKEE

XP_010662379.1 PREDICTED: uncharacterized protein LOC104882103 [Vitis vinifera]5.9e-0734.35Show/hide
Query:  EVACDAASSTLFIFCFCNFIILTILFF----SSFDDDISLKPLSIVIH-SNTDMQQSVCQNLMLQQHPMIDVAEL------------------PVTQNES
        E+   A S++LFIFCFCN II  +L      SS+ D  S  P S+V +   +D + +  ++L  +   ++D +E+                    +Q E 
Subjt:  EVACDAASSTLFIFCFCNFIILTILFF----SSFDDDISLKPLSIVIH-SNTDMQQSVCQNLMLQQHPMIDVAEL------------------PVTQNES

Query:  ESESDDDFRRRVEEFIETVNRGWKEERQSTS
        E E DD+ RRR EEFIE +NRGW+ E   T+
Subjt:  ESESDDDFRRRVEEFIETVNRGWKEERQSTS

XP_030950213.1 uncharacterized protein LOC115974139 [Quercus lobata]3.4e-0737.98Show/hide
Query:  EVACDAASSTLFIFCFCNFIILTILFFSSFDDDISLK---PLSIVIHSNTDMQQ---------------SVCQNLMLQQHPMIDVAEL-PVTQNESESES
        E+   AAS++LFIFCFCN II  +L  S    ++  +   PLS+VI+++T+ +Q               +V +    ++ P++D  E   +  N+ E E 
Subjt:  EVACDAASSTLFIFCFCNFIILTILFFSSFDDDISLK---PLSIVIHSNTDMQQ---------------SVCQNLMLQQHPMIDVAEL-PVTQNESESES

Query:  DDD-FRRRVEEFIETVNRGWKEERQSTSR
        DDD  RRRVEEFIE VN+ WK E   +SR
Subjt:  DDD-FRRRVEEFIETVNRGWKEERQSTSR

XP_031742158.1 probable ATP-dependent RNA helicase ddx52 [Cucumis sativus]4.5e-1547.18Show/hide
Query:  EVACDAASSTLFIFCFCNFIILTILF-----FSSFD--DDISLKPLSIVIHSNTDMQQSVCQNLMLQQHPMIDVAELPVTQNES----------------
        E+A DA SSTLFIFCF N IIL I F      SSFD  +D +  PLSIVIHS T+  +   QN MLQ+ P++ V E+  +QNE+                
Subjt:  EVACDAASSTLFIFCFCNFIILTILF-----FSSFD--DDISLKPLSIVIHSNTDMQQSVCQNLMLQQHPMIDVAELPVTQNES----------------

Query:  ---------ESESDDDFRRRVEEFIETVNRGWKEERQSTSRR
                 E E +DDFR+RVEEFIE VNRGW+EER  T  R
Subjt:  ---------ESESDDDFRRRVEEFIETVNRGWKEERQSTSRR

TrEMBL top hitse value%identityAlignment
A0A2C9VSQ1 Uncharacterized protein8.3e-0737.29Show/hide
Query:  FEVACDAASSTLFIFCFCNFIILTILFFSSFDDDISLKPLSIVIHSNTDMQQSVCQNLMLQQHPMI-------DVAELPVT--QNESESESDDDFRRRVE
        FE+    AS++LFIFCFCN II+ IL   S    ++ +   +   S    Q++V ++  ++   MI       +  + P T   N+  ++ +D+FRRRVE
Subjt:  FEVACDAASSTLFIFCFCNFIILTILFFSSFDDDISLKPLSIVIHSNTDMQQSVCQNLMLQQHPMI-------DVAELPVT--QNESESESDDDFRRRVE

Query:  EFIETVNRGWKEERQSTS
        EFI+ VNRGWK E   TS
Subjt:  EFIETVNRGWKEERQSTS

A0A2C9WFP2 Uncharacterized protein3.4e-0841.12Show/hide
Query:  EVACDAASSTLFIFCFCNFIILTILFF----SSFDDDISLKPLSIVIHSNTDMQQSVCQNLMLQQHPMIDVAELPVTQNESESESDDDFRRRVEEFIETV
        E    AAS++LFIFCFCN IIL +L      +SF    S  P+  V +   ++ QS      L  +   + AE  +  +E+ ++ DD+FRR+VEEFI+ +
Subjt:  EVACDAASSTLFIFCFCNFIILTILFF----SSFDDDISLKPLSIVIHSNTDMQQSVCQNLMLQQHPMIDVAELPVTQNESESESDDDFRRRVEEFIETV

Query:  NRGWKEE
        NRGWKEE
Subjt:  NRGWKEE

A0A2N9GM45 Uncharacterized protein1.2e-0840.62Show/hide
Query:  EVACDAASSTLFIFCFCNFIILTILFFSSFDDDISLK---PLSIVIHSNTDM------QQSVCQNLMLQQHPMIDVA-ELPVTQNE---------SESES
        E+   AAS++LFIFCFCN II  +L  S    D   +   PLS+VI+++T+       +Q    N ML+    +  + E PV   E          E E 
Subjt:  EVACDAASSTLFIFCFCNFIILTILFFSSFDDDISLK---PLSIVIHSNTDM------QQSVCQNLMLQQHPMIDVA-ELPVTQNE---------SESES

Query:  DDDFRRRVEEFIETVNRGWKEERQSTSR
        DD+ RRRVEEFIE VN+GWK E   +SR
Subjt:  DDDFRRRVEEFIETVNRGWKEERQSTSR

A0A438FCZ0 Uncharacterized protein2.8e-0734.35Show/hide
Query:  EVACDAASSTLFIFCFCNFIILTILFF----SSFDDDISLKPLSIVIH-SNTDMQQSVCQNLMLQQHPMIDVAEL------------------PVTQNES
        E+   A S++LFIFCFCN II  +L      SS+ D  S  P S+V +   +D + +  ++L  +   ++D +E+                    +Q E 
Subjt:  EVACDAASSTLFIFCFCNFIILTILFF----SSFDDDISLKPLSIVIH-SNTDMQQSVCQNLMLQQHPMIDVAEL------------------PVTQNES

Query:  ESESDDDFRRRVEEFIETVNRGWKEERQSTS
        E E DD+ RRR EEFIE +NRGW+ E   T+
Subjt:  ESESDDDFRRRVEEFIETVNRGWKEERQSTS

A0A7N2QYC4 Uncharacterized protein1.7e-0737.98Show/hide
Query:  EVACDAASSTLFIFCFCNFIILTILFFSSFDDDISLK---PLSIVIHSNTDMQQ---------------SVCQNLMLQQHPMIDVAEL-PVTQNESESES
        E+   AAS++LFIFCFCN II  +L  S    ++  +   PLS+VI+++T+ +Q               +V +    ++ P++D  E   +  N+ E E 
Subjt:  EVACDAASSTLFIFCFCNFIILTILFFSSFDDDISLK---PLSIVIHSNTDMQQ---------------SVCQNLMLQQHPMIDVAEL-PVTQNESESES

Query:  DDD-FRRRVEEFIETVNRGWKEERQSTSR
        DDD  RRRVEEFIE VN+ WK E   +SR
Subjt:  DDD-FRRRVEEFIETVNRGWKEERQSTSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGAAGTTGCTTGTGATGCAGCTTCCAGCACTCTCTTCATCTTCTGCTTCTGCAATTTCATCATTCTCACCATTCTCTTCTTCTCCAGTTTTGATGATGATATTAGCCT
TAAGCCCCTTTCTATTGTCATTCACTCCAACACAGATATGCAACAATCTGTATGTCAAAATCTCATGCTTCAACAACATCCCATGATTGATGTGGCTGAGCTGCCAGTGA
CCCAAAATGAATCAGAATCAGAATCAGATGATGATTTTAGGAGAAGAGTGGAGGAATTTATTGAAACGGTTAACAGGGGGTGGAAAGAAGAAAGGCAGAGCACCTCGAGA
CGAGATCAC
mRNA sequenceShow/hide mRNA sequence
TTTGAAGTTGCTTGTGATGCAGCTTCCAGCACTCTCTTCATCTTCTGCTTCTGCAATTTCATCATTCTCACCATTCTCTTCTTCTCCAGTTTTGATGATGATATTAGCCT
TAAGCCCCTTTCTATTGTCATTCACTCCAACACAGATATGCAACAATCTGTATGTCAAAATCTCATGCTTCAACAACATCCCATGATTGATGTGGCTGAGCTGCCAGTGA
CCCAAAATGAATCAGAATCAGAATCAGATGATGATTTTAGGAGAAGAGTGGAGGAATTTATTGAAACGGTTAACAGGGGGTGGAAAGAAGAAAGGCAGAGCACCTCGAGA
CGAGATCAC
Protein sequenceShow/hide protein sequence
FEVACDAASSTLFIFCFCNFIILTILFFSSFDDDISLKPLSIVIHSNTDMQQSVCQNLMLQQHPMIDVAELPVTQNESESESDDDFRRRVEEFIETVNRGWKEERQSTSR
RDH